RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 ADOQ96SZ5 270 aa5.27□□□□□ -1.57
CDC42BPA-209ENST00000448940 MRI1Q9BV20 369 aa5.27□□□□□ -1.57
CDC42BPA-209ENST00000448940 CLEC4MQ9H2X3 399 aaPredicted RBP5.27□□□□□ -1.57
CDC42BPA-209ENST00000448940 BRD7Q9NPI1 651 aa5.27□□□□□ -1.57
CDC42BPA-209ENST00000448940 FBXO9Q9UK97 447 aaPredicted RBP5.27□□□□□ -1.57
CDC42BPA-209ENST00000448940 CNOT6Q9ULM6 557 aaKnown RBP5.27□□□□□ -1.57
CDC42BPA-209ENST00000448940 MRPS18BQ9Y676 258 aaKnown RBP5.27□□□□□ -1.57
CDC42BPA-209ENST00000448940 CTNSO60931 367 aa5.27□□□□□ -1.57
CDC42BPA-209ENST00000448940 UGT2B17O75795 530 aa5.27□□□□□ -1.57
CDC42BPA-209ENST00000448940 CLDN14O95500 239 aa5.27□□□□□ -1.57
CDC42BPA-209ENST00000448940 EPHA3P29320 983 aa5.27□□□□□ -1.57
CDC42BPA-209ENST00000448940 KPNB1Q14974 876 aaKnown RBP5.27□□□□□ -1.57
CDC42BPA-209ENST00000448940 MFSD13AQ14CX5 517 aa5.27□□□□□ -1.57
CDC42BPA-209ENST00000448940 C1orf146Q5VVC0 180 aa5.27□□□□□ -1.57
CDC42BPA-209ENST00000448940 ZNF730Q6ZMV8 503 aa5.27□□□□□ -1.57
CDC42BPA-209ENST00000448940 PGBD5Q8N414 524 aa5.27□□□□□ -1.57
CDC42BPA-209ENST00000448940 OR8K3Q8NH51 312 aa5.27□□□□□ -1.57
CDC42BPA-209ENST00000448940 VANGL1Q8TAA9 524 aaPredicted RBP5.27□□□□□ -1.57
CDC42BPA-209ENST00000448940 ASB11Q8WXH4 323 aa5.27□□□□□ -1.57
CDC42BPA-209ENST00000448940 SLC46A1Q96NT5 459 aa5.27□□□□□ -1.57
CDC42BPA-209ENST00000448940 CDK15Q96Q40 435 aa5.27□□□□□ -1.57
CDC42BPA-209ENST00000448940 SLC17A6Q9P2U8 582 aa5.27□□□□□ -1.57
CDC42BPA-209ENST00000448940 RNF11Q9Y3C5 154 aa5.27□□□□□ -1.57
CDC42BPA-209ENST00000448940 KIAA1551Q9HCM1 1747 aa5.26□□□□□ -1.57
CDC42BPA-209ENST00000448940 ATP8B1O43520 1251 aa5.26□□□□□ -1.57
CDC42BPA-209ENST00000448940 CD59P13987 128 aa5.26□□□□□ -1.57
CDC42BPA-209ENST00000448940 CD68P34810 354 aaPredicted RBP5.26□□□□□ -1.57
CDC42BPA-209ENST00000448940 FAM53BQ14153 422 aa5.26□□□□□ -1.57
CDC42BPA-209ENST00000448940 ERICH5Q6P6B1 374 aa5.26□□□□□ -1.57
CDC42BPA-209ENST00000448940 SPATA21Q7Z572 469 aa5.26□□□□□ -1.57
CDC42BPA-209ENST00000448940 ARMC8Q8IUR7 673 aa5.26□□□□□ -1.57
CDC42BPA-209ENST00000448940 RASGEF1CQ8N431 466 aa5.26□□□□□ -1.57
CDC42BPA-209ENST00000448940 ABHD11Q8NFV4 315 aa5.26□□□□□ -1.57
CDC42BPA-209ENST00000448940 PNPT1Q8TCS8 783 aaKnown RBP5.26□□□□□ -1.57
CDC42BPA-209ENST00000448940 GPR22Q99680 433 aa5.26□□□□□ -1.57
CDC42BPA-209ENST00000448940 GPATCH2Q9NW75 528 aa5.26□□□□□ -1.57
CDC42BPA-209ENST00000448940 TEX10Q9NXF1 929 aaPredicted RBP5.26□□□□□ -1.57
CDC42BPA-209ENST00000448940 ZNF180Q9UJW8 692 aa5.26□□□□□ -1.57
CDC42BPA-209ENST00000448940 ADAM21Q9UKJ8 722 aa5.26□□□□□ -1.57
CDC42BPA-209ENST00000448940 LRCH1Q9Y2L9 728 aa5.26□□□□□ -1.57
CDC42BPA-209ENST00000448940 SUV39H1O43463 412 aa5.26□□□□□ -1.57
CDC42BPA-209ENST00000448940 ATP5HO75947 161 aa5.26□□□□□ -1.57
CDC42BPA-209ENST00000448940 CHN1P15882 459 aa5.26□□□□□ -1.57
CDC42BPA-209ENST00000448940 HIST1H1TP22492 207 aaPredicted RBP5.26□□□□□ -1.57
CDC42BPA-209ENST00000448940 RPL34P49207 117 aaKnown RBP5.26□□□□□ -1.57
CDC42BPA-209ENST00000448940 HK2P52789 917 aa5.26□□□□□ -1.57
CDC42BPA-209ENST00000448940 PMS2P3Q13401 168 aa5.26□□□□□ -1.57
CDC42BPA-209ENST00000448940 KCNJ11Q14654 390 aa5.26□□□□□ -1.57
CDC42BPA-209ENST00000448940 FAM182AQ5T1J6 154 aa5.26□□□□□ -1.57
CDC42BPA-209ENST00000448940 NDUFAF5Q5TEU4 345 aa5.26□□□□□ -1.57
CDC42BPA-209ENST00000448940 PWWP2BQ6NUJ5 590 aa5.26□□□□□ -1.57
CDC42BPA-209ENST00000448940 D2HGDHQ8N465 521 aa5.26□□□□□ -1.57
CDC42BPA-209ENST00000448940 LMNTD1Q8N9Z9 388 aa5.26□□□□□ -1.57
CDC42BPA-209ENST00000448940 POGLUT1Q8NBL1 392 aa5.26□□□□□ -1.57
CDC42BPA-209ENST00000448940 HUS1BQ8NHY5 278 aa5.26□□□□□ -1.57
CDC42BPA-209ENST00000448940 AENQ8WTP8 325 aaKnown RBP5.26□□□□□ -1.57
CDC42BPA-209ENST00000448940 UBTD2Q8WUN7 234 aa5.26□□□□□ -1.57
CDC42BPA-209ENST00000448940 FKBP10Q96AY3 582 aa5.26□□□□□ -1.57
CDC42BPA-209ENST00000448940 C19orf60Q96EN9 201 aa5.26□□□□□ -1.57
CDC42BPA-209ENST00000448940 MACROD1Q9BQ69 325 aa5.26□□□□□ -1.57
CDC42BPA-209ENST00000448940 TRIM2Q9C040 744 aa5.26□□□□□ -1.57
CDC42BPA-209ENST00000448940 FN3KQ9H479 309 aa5.26□□□□□ -1.57
CDC42BPA-209ENST00000448940 SAGE2PA6NJ88 616 aa5.26□□□□□ -1.57
CDC42BPA-209ENST00000448940 MAGEB17A8MXT2 336 aa5.26□□□□□ -1.57
CDC42BPA-209ENST00000448940 C11orf98E9PRG8 122 aa5.26□□□□□ -1.57
CDC42BPA-209ENST00000448940 TRIM3O75382 744 aaPredicted RBP5.26□□□□□ -1.57
CDC42BPA-209ENST00000448940 FOLR1P15328 257 aa5.26□□□□□ -1.57
CDC42BPA-209ENST00000448940 TIA1P31483 386 aaKnown RBP eCLIP5.26□□□□□ -1.57
CDC42BPA-209ENST00000448940 GSTM5P46439 218 aa5.26□□□□□ -1.57
CDC42BPA-209ENST00000448940 GAB1Q13480 694 aa5.26□□□□□ -1.57
CDC42BPA-209ENST00000448940 KRR1Q13601 381 aaKnown RBP5.26□□□□□ -1.57
CDC42BPA-209ENST00000448940 DCAF10Q5QP82 559 aa5.26□□□□□ -1.57
CDC42BPA-209ENST00000448940 ZNF787Q6DD87 383 aa5.26□□□□□ -1.57
CDC42BPA-209ENST00000448940 CREG2Q8IUH2 290 aa5.26□□□□□ -1.57
CDC42BPA-209ENST00000448940 CDRT4Q8N9R6 151 aa5.26□□□□□ -1.57
CDC42BPA-209ENST00000448940 NUP43Q8NFH3 380 aa5.26□□□□□ -1.57
CDC42BPA-209ENST00000448940 OR56A3Q8NH54 315 aa5.26□□□□□ -1.57
CDC42BPA-209ENST00000448940 PIWIL2Q8TC59 973 aaKnown RBP5.26□□□□□ -1.57
CDC42BPA-209ENST00000448940 SIKE1Q9BRV8 207 aa5.26□□□□□ -1.57
CDC42BPA-209ENST00000448940 SLITRK2Q9H156 845 aa5.26□□□□□ -1.57
CDC42BPA-209ENST00000448940 CUEDC1Q9NWM3 386 aaPredicted RBP5.26□□□□□ -1.57
CDC42BPA-209ENST00000448940 H0YAE9 185 aa5.26□□□□□ -1.57
CDC42BPA-209ENST00000448940 GPR39O43194 453 aa5.26□□□□□ -1.57
CDC42BPA-209ENST00000448940 TPST1O60507 370 aa5.26□□□□□ -1.57
CDC42BPA-209ENST00000448940 TMEM127O75204 238 aa5.26□□□□□ -1.57
CDC42BPA-209ENST00000448940 IL3P08700 152 aa5.26□□□□□ -1.57
CDC42BPA-209ENST00000448940 GRK5P34947 590 aa5.26□□□□□ -1.57
CDC42BPA-209ENST00000448940 RAB14P61106 215 aa5.26□□□□□ -1.57
CDC42BPA-209ENST00000448940 RBM39Q14498 530 aaKnown RBP5.26□□□□□ -1.57
CDC42BPA-209ENST00000448940 MYBPC3Q14896 1274 aa5.26□□□□□ -1.57
CDC42BPA-209ENST00000448940 KLHL12Q53G59 568 aa5.26□□□□□ -1.57
CDC42BPA-209ENST00000448940 PROSER1Q86XN7 944 aa5.26□□□□□ -1.57
CDC42BPA-209ENST00000448940 ZNF555Q8NEP9 628 aa5.26□□□□□ -1.57
CDC42BPA-209ENST00000448940 ZNF417Q8TAU3 575 aa5.26□□□□□ -1.57
CDC42BPA-209ENST00000448940 C11orf40Q8WZ69 217 aa5.26□□□□□ -1.57
CDC42BPA-209ENST00000448940 PGM2Q96G03 612 aa5.26□□□□□ -1.57
CDC42BPA-209ENST00000448940 ZNF587Q96SQ5 575 aaPredicted RBP5.26□□□□□ -1.57
CDC42BPA-209ENST00000448940 OSBPL11Q9BXB4 747 aa5.26□□□□□ -1.57
CDC42BPA-209ENST00000448940 LOC105369274A0A096LPK9 316 aa5.26□□□□□ -1.57
CDC42BPA-209ENST00000448940 ABCD4O14678 606 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms