RNA–Protein interactions for RNA: ENST00000448872.6

RCL1-208, Transcript of RNA terminal phosphate cyclase like 1, humanhuman

TSL 1 (best) BASIC

Gene RCL1, Length 1,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1-208ENST00000448872 ZNF350Q9GZX5 532 aa10.88□□□□□ -0.67
RCL1-208ENST00000448872 RNF32Q9H0A6 362 aa10.88□□□□□ -0.67
RCL1-208ENST00000448872 SPAG4Q9NPE6 437 aa10.88□□□□□ -0.67
RCL1-208ENST00000448872 EXD2Q9NVH0 621 aa10.88□□□□□ -0.67
RCL1-208ENST00000448872 TAS2R1Q9NYW7 299 aa10.88□□□□□ -0.67
RCL1-208ENST00000448872 ADA2Q9NZK5 511 aa10.88□□□□□ -0.67
RCL1-208ENST00000448872 LUZP4Q9P127 313 aa10.88□□□□□ -0.67
RCL1-208ENST00000448872 TMEM181Q9P2C4 612 aa10.88□□□□□ -0.67
RCL1-208ENST00000448872 ABCD2Q9UBJ2 740 aa10.88□□□□□ -0.67
RCL1-208ENST00000448872 P2RX2Q9UBL9 471 aa10.88□□□□□ -0.67
RCL1-208ENST00000448872 KCNE5Q9UJ90 142 aa10.88□□□□□ -0.67
RCL1-208ENST00000448872 CORO2BQ9UQ03 480 aa10.88□□□□□ -0.67
RCL1-208ENST00000448872 L3MBTL1Q9Y468 752 aa10.88□□□□□ -0.67
RCL1-208ENST00000448872 ZNF451Q9Y4E5 1061 aa10.88□□□□□ -0.67
RCL1-208ENST00000448872 PCDHGB3Q9Y5G1 929 aa10.88□□□□□ -0.67
RCL1-208ENST00000448872 HRH3Q9Y5N1 445 aa10.88□□□□□ -0.67
RCL1-208ENST00000448872 PTPRQQ9UMZ3 2332 aa10.88□□□□□ -0.67
RCL1-208ENST00000448872 TPRP12270 2363 aaKnown RBP10.88□□□□□ -0.67
RCL1-208ENST00000448872 C15orf38-AP3S2A0A0A6YYH1 394 aa10.87□□□□□ -0.67
RCL1-208ENST00000448872 PRORSD1PA6NEY8 169 aa10.87□□□□□ -0.67
RCL1-208ENST00000448872 SLC25A12O75746 678 aa10.87□□□□□ -0.67
RCL1-208ENST00000448872 SORBS2O94875 1100 aaKnown RBP10.87□□□□□ -0.67
RCL1-208ENST00000448872 AGR2O95994 175 aa10.87□□□□□ -0.67
RCL1-208ENST00000448872 ARAFP10398 606 aa10.87□□□□□ -0.67
RCL1-208ENST00000448872 AQP1P29972 269 aa10.87□□□□□ -0.67
RCL1-208ENST00000448872 MSX2P35548 267 aaPredicted RBP10.87□□□□□ -0.67
RCL1-208ENST00000448872 MAGEA8P43361 318 aa10.87□□□□□ -0.67
RCL1-208ENST00000448872 MAP1BP46821 2468 aaKnown RBP10.87□□□□□ -0.67
RCL1-208ENST00000448872 PNLIPRP2P54317 469 aa10.87□□□□□ -0.67
RCL1-208ENST00000448872 GPR85P60893 370 aa10.87□□□□□ -0.67
RCL1-208ENST00000448872 CDK6Q00534 326 aa10.87□□□□□ -0.67
RCL1-208ENST00000448872 SCARB2Q14108 478 aa10.87□□□□□ -0.67
RCL1-208ENST00000448872 MAPK14Q16539 360 aa10.87□□□□□ -0.67
RCL1-208ENST00000448872 FLYWCH1Q4VC44 716 aa10.87□□□□□ -0.67
RCL1-208ENST00000448872 LACTB2Q53H82 288 aaPredicted RBP10.87□□□□□ -0.67
RCL1-208ENST00000448872 C16orf89Q6UX73 402 aa10.87□□□□□ -0.67
RCL1-208ENST00000448872 IGFL3Q6UXB1 125 aa10.87□□□□□ -0.67
RCL1-208ENST00000448872 APOOLQ6UXV4 268 aa10.87□□□□□ -0.67
RCL1-208ENST00000448872 RTL4Q6ZR62 310 aa10.87□□□□□ -0.67
RCL1-208ENST00000448872 NUP54Q7Z3B4 507 aa10.87□□□□□ -0.67
RCL1-208ENST00000448872 ARPINQ7Z6K5 226 aa10.87□□□□□ -0.67
RCL1-208ENST00000448872 SERPINA11Q86U17 422 aa10.87□□□□□ -0.67
RCL1-208ENST00000448872 ZADH2Q8N4Q0 377 aa10.87□□□□□ -0.67
RCL1-208ENST00000448872 SPPL2AQ8TCT8 520 aa10.87□□□□□ -0.67
RCL1-208ENST00000448872 GRHL3Q8TE85 626 aa10.87□□□□□ -0.67
RCL1-208ENST00000448872 PAQR8Q8TEZ7 354 aa10.87□□□□□ -0.67
RCL1-208ENST00000448872 TRNT1Q96Q11 434 aaKnown RBP10.87□□□□□ -0.67
RCL1-208ENST00000448872 TREX2Q9BQ50 279 aaPredicted RBP10.87□□□□□ -0.67
RCL1-208ENST00000448872 G6PC3Q9BUM1 346 aa10.87□□□□□ -0.67
RCL1-208ENST00000448872 SLC38A1Q9H2H9 487 aa10.87□□□□□ -0.67
RCL1-208ENST00000448872 TMEM38AQ9H6F2 299 aa10.87□□□□□ -0.67
RCL1-208ENST00000448872 PROK2Q9HC23 129 aa10.87□□□□□ -0.67
RCL1-208ENST00000448872 GALNT9Q9HCQ5 603 aa10.87□□□□□ -0.67
RCL1-208ENST00000448872 DEPPQ9NTK1 212 aa10.87□□□□□ -0.67
RCL1-208ENST00000448872 CNOT11Q9UKZ1 510 aaKnown RBP10.87□□□□□ -0.67
RCL1-208ENST00000448872 LIPT1Q9Y234 373 aa10.87□□□□□ -0.67
RCL1-208ENST00000448872 WDR45Q9Y484 360 aa10.87□□□□□ -0.67
RCL1-208ENST00000448872 BSNQ9UPA5 3926 aa10.87□□□□□ -0.67
RCL1-208ENST00000448872 PINLYPA6NC86 204 aa10.87□□□□□ -0.67
RCL1-208ENST00000448872 NPIPB9F8W1W9 429 aa10.87□□□□□ -0.67
RCL1-208ENST00000448872 ERVH48-1M5A8F1 160 aa10.87□□□□□ -0.67
RCL1-208ENST00000448872 EBAG9O00559 213 aa10.87□□□□□ -0.67
RCL1-208ENST00000448872 ADAM10O14672 748 aa10.87□□□□□ -0.67
RCL1-208ENST00000448872 SCO2O43819 266 aa10.87□□□□□ -0.67
RCL1-208ENST00000448872 KIAA0513O60268 411 aa10.87□□□□□ -0.67
RCL1-208ENST00000448872 FADS1O60427 444 aa10.87□□□□□ -0.67
RCL1-208ENST00000448872 STX11O75558 287 aa10.87□□□□□ -0.67
RCL1-208ENST00000448872 GCM2O75603 506 aaPredicted RBP10.87□□□□□ -0.67
RCL1-208ENST00000448872 AK1P00568 194 aa10.87□□□□□ -0.67
RCL1-208ENST00000448872 SP1P08047 785 aa10.87□□□□□ -0.67
RCL1-208ENST00000448872 TCN1P20061 433 aaPredicted RBP10.87□□□□□ -0.67
RCL1-208ENST00000448872 ATP6V1C1P21283 382 aa10.87□□□□□ -0.67
RCL1-208ENST00000448872 DCTP40126 519 aa10.87□□□□□ -0.67
RCL1-208ENST00000448872 PTGDSP41222 190 aa10.87□□□□□ -0.67
RCL1-208ENST00000448872 TMED10P49755 219 aaKnown RBP10.87□□□□□ -0.67
RCL1-208ENST00000448872 GSK3BP49841 420 aa10.87□□□□□ -0.67
RCL1-208ENST00000448872 PSMD4P55036 377 aaKnown RBP10.87□□□□□ -0.67
RCL1-208ENST00000448872 PSPHP78330 225 aa10.87□□□□□ -0.67
RCL1-208ENST00000448872 TXNL4AP83876 142 aaKnown RBP10.87□□□□□ -0.67
RCL1-208ENST00000448872 HPCAP84074 193 aa10.87□□□□□ -0.67
RCL1-208ENST00000448872 GABPB1Q06547 395 aaPredicted RBP10.87□□□□□ -0.67
RCL1-208ENST00000448872 CEACAM7Q14002 265 aa10.87□□□□□ -0.67
RCL1-208ENST00000448872 INPP5JQ15735 1006 aaPredicted RBP10.87□□□□□ -0.67
RCL1-208ENST00000448872 VMACQ2NL98 169 aa10.87□□□□□ -0.67
RCL1-208ENST00000448872 NADK2Q4G0N4 442 aa10.87□□□□□ -0.67
RCL1-208ENST00000448872 MARCH3Q86UD3 253 aa10.87□□□□□ -0.67
RCL1-208ENST00000448872 GPALPP1Q8IXQ4 340 aa10.87□□□□□ -0.67
RCL1-208ENST00000448872 GATSQ8NAP1 163 aa10.87□□□□□ -0.67
RCL1-208ENST00000448872 PSD4Q8NDX1 1056 aa10.87□□□□□ -0.67
RCL1-208ENST00000448872 OR2T12Q8NG77 320 aa10.87□□□□□ -0.67
RCL1-208ENST00000448872 TM9SF4Q92544 642 aa10.87□□□□□ -0.67
RCL1-208ENST00000448872 REXO5Q96IC2 774 aaKnown RBP10.87□□□□□ -0.67
RCL1-208ENST00000448872 CLPTM1LQ96KA5 538 aa10.87□□□□□ -0.67
RCL1-208ENST00000448872 SGCZQ96LD1 299 aa10.87□□□□□ -0.67
RCL1-208ENST00000448872 RSPO3Q9BXY4 272 aaPredicted RBP10.87□□□□□ -0.67
RCL1-208ENST00000448872 ADNPQ9H2P0 1102 aa10.87□□□□□ -0.67
RCL1-208ENST00000448872 THUMPD1Q9NXG2 353 aaKnown RBP10.87□□□□□ -0.67
RCL1-208ENST00000448872 TUBD1Q9UJT1 453 aa10.87□□□□□ -0.67
RCL1-208ENST00000448872 MRTO4Q9UKD2 239 aaKnown RBP10.87□□□□□ -0.67
RCL1-208ENST00000448872 PRAMEF25A6NGN4 478 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms