RNA–Protein interactions for RNA: ENST00000448530.5

VCP-203, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 950 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-203ENST00000448530 BCKDHAP12694 445 aa17.85■□□□□ 0.45
VCP-203ENST00000448530 HK1P19367 917 aa17.85■□□□□ 0.45
VCP-203ENST00000448530 RPL3P39023 403 aaKnown RBP17.85■□□□□ 0.45
VCP-203ENST00000448530 GANABQ14697 944 aaKnown RBP17.85■□□□□ 0.45
VCP-203ENST00000448530 BCL2A1Q16548 175 aa17.85■□□□□ 0.45
VCP-203ENST00000448530 FLYWCH1Q4VC44 716 aa17.85■□□□□ 0.45
VCP-203ENST00000448530 ZNF385BQ569K4 471 aa17.85■□□□□ 0.45
VCP-203ENST00000448530 RAET1LQ5VY80 246 aa17.85■□□□□ 0.45
VCP-203ENST00000448530 WDR93Q6P2C0 686 aa17.85■□□□□ 0.45
VCP-203ENST00000448530 POMZP3Q6PJE2 187 aa17.85■□□□□ 0.45
VCP-203ENST00000448530 LRIG3Q6UXM1 1119 aa17.85■□□□□ 0.45
VCP-203ENST00000448530 GRAMD2AQ8IUY3 354 aa17.85■□□□□ 0.45
VCP-203ENST00000448530 FADS6Q8N9I5 356 aa17.85■□□□□ 0.45
VCP-203ENST00000448530 CDRT4Q8N9R6 151 aa17.85■□□□□ 0.45
VCP-203ENST00000448530 NUP43Q8NFH3 380 aa17.85■□□□□ 0.45
VCP-203ENST00000448530 OR2M3Q8NG83 312 aa17.85■□□□□ 0.45
VCP-203ENST00000448530 FAM222BQ8WU58 562 aa17.85■□□□□ 0.45
VCP-203ENST00000448530 SLC9A6Q92581 669 aa17.85■□□□□ 0.45
VCP-203ENST00000448530 CAVIN3Q969G5 261 aa17.85■□□□□ 0.45
VCP-203ENST00000448530 RMND5BQ96G75 393 aaPredicted RBP17.85■□□□□ 0.45
VCP-203ENST00000448530 SFXN3Q9BWM7 321 aa17.85■□□□□ 0.45
VCP-203ENST00000448530 FLRT3Q9NZU0 649 aa17.85■□□□□ 0.45
VCP-203ENST00000448530 CRIM1Q9NZV1 1036 aa17.85■□□□□ 0.45
VCP-203ENST00000448530 MED11Q9P086 117 aa17.85■□□□□ 0.45
VCP-203ENST00000448530 SPG11Q96JI7 2443 aa17.84■□□□□ 0.45
VCP-203ENST00000448530 GXYLT2A0PJZ3 443 aa17.84■□□□□ 0.45
VCP-203ENST00000448530 PEX11AO75192 247 aa17.84■□□□□ 0.45
VCP-203ENST00000448530 RCBTB2O95199 551 aa17.84■□□□□ 0.45
VCP-203ENST00000448530 UTS2O95399 124 aa17.84■□□□□ 0.45
VCP-203ENST00000448530 PEPDP12955 493 aa17.84■□□□□ 0.45
VCP-203ENST00000448530 ZNF708P17019 499 aa17.84■□□□□ 0.45
VCP-203ENST00000448530 POU3F2P20265 443 aaPredicted RBP17.84■□□□□ 0.45
VCP-203ENST00000448530 EEF1A1P68104 462 aaKnown RBP17.84■□□□□ 0.45
VCP-203ENST00000448530 PDE7AQ13946 482 aa17.84■□□□□ 0.45
VCP-203ENST00000448530 UGT3A2Q3SY77 523 aa17.84■□□□□ 0.45
VCP-203ENST00000448530 ATP6AP1LQ52LC2 224 aa17.84■□□□□ 0.45
VCP-203ENST00000448530 EEF1A1P5Q5VTE0 462 aa17.84■□□□□ 0.45
VCP-203ENST00000448530 P4HA3Q7Z4N8 544 aa17.84■□□□□ 0.45
VCP-203ENST00000448530 MARCH3Q86UD3 253 aa17.84■□□□□ 0.45
VCP-203ENST00000448530 MEIOBQ8N635 442 aa17.84■□□□□ 0.45
VCP-203ENST00000448530 GOT1L1Q8NHS2 421 aaPredicted RBP17.84■□□□□ 0.45
VCP-203ENST00000448530 PPP1R14CQ8TAE6 165 aa17.84■□□□□ 0.45
VCP-203ENST00000448530 DUSP19Q8WTR2 217 aa17.84■□□□□ 0.45
VCP-203ENST00000448530 PIK3R3Q92569 461 aa17.84■□□□□ 0.45
VCP-203ENST00000448530 INTS12Q96CB8 462 aaKnown RBP17.84■□□□□ 0.45
VCP-203ENST00000448530 MS4A4EQ96PG1 132 aa17.84■□□□□ 0.45
VCP-203ENST00000448530 UCN2Q96RP3 112 aa17.84■□□□□ 0.45
VCP-203ENST00000448530 POLDIP3Q9BY77 421 aaKnown RBP17.84■□□□□ 0.45
VCP-203ENST00000448530 HHATLQ9HCP6 504 aa17.84■□□□□ 0.45
VCP-203ENST00000448530 TEP1Q99973 2627 aaKnown RBP17.84■□□□□ 0.45
VCP-203ENST00000448530 TUBAL3A6NHL2 446 aa17.83■□□□□ 0.44
VCP-203ENST00000448530 C17orf51A8MQB3 221 aa17.83■□□□□ 0.44
VCP-203ENST00000448530 LINC01387J3KSC0 135 aa17.83■□□□□ 0.44
VCP-203ENST00000448530 EMC8O43402 210 aa17.83■□□□□ 0.44
VCP-203ENST00000448530 CTAG2O75638 210 aa17.83■□□□□ 0.44
VCP-203ENST00000448530 CPA2P48052 419 aa17.83■□□□□ 0.44
VCP-203ENST00000448530 CLDN18P56856 261 aa17.83■□□□□ 0.44
VCP-203ENST00000448530 EEFSECP57772 596 aaKnown RBP17.83■□□□□ 0.44
VCP-203ENST00000448530 PRR5P85299 388 aa17.83■□□□□ 0.44
VCP-203ENST00000448530 C17orf67Q0P5P2 114 aa17.83■□□□□ 0.44
VCP-203ENST00000448530 ADGRE4PQ86SQ3 457 aa17.83■□□□□ 0.44
VCP-203ENST00000448530 UBQLNLQ8IYU4 475 aa17.83■□□□□ 0.44
VCP-203ENST00000448530 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.83■□□□□ 0.444e-6■■■□□ 16
VCP-203ENST00000448530 V9GYY5 206 aaPredicted RBP17.83■□□□□ 0.44
VCP-203ENST00000448530 NKX2-2O95096 273 aa17.82■□□□□ 0.44
VCP-203ENST00000448530 ANGPTL1O95841 491 aa17.82■□□□□ 0.44
VCP-203ENST00000448530 BPGMP07738 259 aa17.82■□□□□ 0.44
VCP-203ENST00000448530 ALOX5P09917 674 aa17.82■□□□□ 0.44
VCP-203ENST00000448530 FRKP42685 505 aaPredicted RBP17.82■□□□□ 0.44
VCP-203ENST00000448530 DIO3P55073 304 aa17.82■□□□□ 0.44
VCP-203ENST00000448530 B3GALT5-AS1P59052 145 aa17.82■□□□□ 0.44
VCP-203ENST00000448530 FOXF2Q12947 444 aa17.82■□□□□ 0.44
VCP-203ENST00000448530 GRAMD1BQ3KR37 738 aa17.82■□□□□ 0.44
VCP-203ENST00000448530 KRT71Q3SY84 523 aa17.82■□□□□ 0.44
VCP-203ENST00000448530 FBXW10Q5XX13 1052 aa17.82■□□□□ 0.44
VCP-203ENST00000448530 EXOC3L1Q86VI1 746 aa17.82■□□□□ 0.44
VCP-203ENST00000448530 MED12LQ86YW9 2145 aa17.82■□□□□ 0.44
VCP-203ENST00000448530 NUDCD3Q8IVD9 361 aa17.82■□□□□ 0.44
VCP-203ENST00000448530 GCNT2Q8N0V5 402 aa17.82■□□□□ 0.44
VCP-203ENST00000448530 FBXO30Q8TB52 745 aa17.82■□□□□ 0.44
VCP-203ENST00000448530 JADE3Q92613 823 aa17.82■□□□□ 0.44
VCP-203ENST00000448530 C1GALT1C1Q96EU7 318 aa17.82■□□□□ 0.44
VCP-203ENST00000448530 CHMP6Q96FZ7 201 aa17.82■□□□□ 0.44
VCP-203ENST00000448530 PIGQQ9BRB3 760 aa17.82■□□□□ 0.44
VCP-203ENST00000448530 GPATCH1Q9BRR8 931 aaKnown RBP17.82■□□□□ 0.44
VCP-203ENST00000448530 TMEM109Q9BVC6 243 aa17.82■□□□□ 0.44
VCP-203ENST00000448530 PIGMQ9H3S5 423 aa17.82■□□□□ 0.44
VCP-203ENST00000448530 ATAD3AQ9NVI7 634 aa17.82■□□□□ 0.44
VCP-203ENST00000448530 NTMQ9P121 344 aa17.82■□□□□ 0.44
VCP-203ENST00000448530 CLCF1Q9UBD9 225 aa17.82■□□□□ 0.44
VCP-203ENST00000448530 GIMAP2Q9UG22 337 aa17.82■□□□□ 0.44
VCP-203ENST00000448530 ATP6V1HQ9UI12 483 aa17.82■□□□□ 0.44
VCP-203ENST00000448530 A0A1W2PRB8 838 aa17.81■□□□□ 0.44
VCP-203ENST00000448530 B4DXG7 233 aa17.81■□□□□ 0.44
VCP-203ENST00000448530 SCAMP2O15127 329 aaKnown RBP17.81■□□□□ 0.44
VCP-203ENST00000448530 SKAP2O75563 359 aaPredicted RBP17.81■□□□□ 0.44
VCP-203ENST00000448530 HPGDP15428 266 aa17.81■□□□□ 0.44
VCP-203ENST00000448530 EFNA1P20827 205 aaPredicted RBP17.81■□□□□ 0.44
VCP-203ENST00000448530 PRIM2P49643 509 aa17.81■□□□□ 0.44
VCP-203ENST00000448530 SORDQ00796 357 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms