RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 BHLHE41Q9C0J9 482 aaPredicted RBP12.59□□□□□ -0.39
PDLIM2-213ENST00000448520 SLC6A13Q9NSD5 602 aa12.59□□□□□ -0.39
PDLIM2-213ENST00000448520 GIMAP4Q9NUV9 329 aa12.59□□□□□ -0.39
PDLIM2-213ENST00000448520 ITPR3Q14573 2671 aa12.59□□□□□ -0.39
PDLIM2-213ENST00000448520 A0A1W2PRB8 838 aa12.58□□□□□ -0.4
PDLIM2-213ENST00000448520 FAM221AA4D161 298 aa12.58□□□□□ -0.4
PDLIM2-213ENST00000448520 ANKRD33BA6NCL7 494 aa12.58□□□□□ -0.4
PDLIM2-213ENST00000448520 CCDC154A6NI56 674 aa12.58□□□□□ -0.4
PDLIM2-213ENST00000448520 OR6C76A6NM76 312 aa12.58□□□□□ -0.4
PDLIM2-213ENST00000448520 HSPB2A8KAH6 182 aa12.58□□□□□ -0.4
PDLIM2-213ENST00000448520 AHRRA9YTQ3 701 aa12.58□□□□□ -0.4
PDLIM2-213ENST00000448520 SYT5O00445 386 aa12.58□□□□□ -0.4
PDLIM2-213ENST00000448520 CFLARO15519 480 aa12.58□□□□□ -0.4
PDLIM2-213ENST00000448520 OR10H2O60403 315 aa12.58□□□□□ -0.4
PDLIM2-213ENST00000448520 NADKO95544 446 aaPredicted RBP12.58□□□□□ -0.4
PDLIM2-213ENST00000448520 GSNP06396 782 aa12.58□□□□□ -0.4
PDLIM2-213ENST00000448520 CELA3AP09093 270 aa12.58□□□□□ -0.4
PDLIM2-213ENST00000448520 COX4I1P13073 169 aa12.58□□□□□ -0.4
PDLIM2-213ENST00000448520 PORP16435 677 aaPredicted RBP12.58□□□□□ -0.4
PDLIM2-213ENST00000448520 NTSP30990 170 aa12.58□□□□□ -0.4
PDLIM2-213ENST00000448520 FRKP42685 505 aaPredicted RBP12.58□□□□□ -0.4
PDLIM2-213ENST00000448520 DLX5P56178 289 aa12.58□□□□□ -0.4
PDLIM2-213ENST00000448520 KCNJ2P63252 427 aa12.58□□□□□ -0.4
PDLIM2-213ENST00000448520 MRPS35P82673 323 aaKnown RBP12.58□□□□□ -0.4
PDLIM2-213ENST00000448520 SF3B4Q15427 424 aaKnown RBP eCLIP12.58□□□□□ -0.4
PDLIM2-213ENST00000448520 CEBPEQ15744 281 aa12.58□□□□□ -0.4
PDLIM2-213ENST00000448520 HSPB2Q16082 182 aa12.58□□□□□ -0.4
PDLIM2-213ENST00000448520 KRTAP21-3Q3LHN1 58 aa12.58□□□□□ -0.4
PDLIM2-213ENST00000448520 TBCELQ5QJ74 424 aa12.58□□□□□ -0.4
PDLIM2-213ENST00000448520 LYPD8Q6UX82 237 aa12.58□□□□□ -0.4
PDLIM2-213ENST00000448520 LIX1LQ8IVB5 337 aa12.58□□□□□ -0.4
PDLIM2-213ENST00000448520 C9orf40Q8IXQ3 194 aa12.58□□□□□ -0.4
PDLIM2-213ENST00000448520 TAGAPQ8N103 731 aa12.58□□□□□ -0.4
PDLIM2-213ENST00000448520 FBXW8Q8N3Y1 598 aa12.58□□□□□ -0.4
PDLIM2-213ENST00000448520 FOXC2Q99958 501 aa12.58□□□□□ -0.4
PDLIM2-213ENST00000448520 SERHLQ9NQF3 203 aa12.58□□□□□ -0.4
PDLIM2-213ENST00000448520 SIRT3Q9NTG7 399 aaPredicted RBP12.58□□□□□ -0.4
PDLIM2-213ENST00000448520 ATAD3AQ9NVI7 634 aa12.58□□□□□ -0.4
PDLIM2-213ENST00000448520 DNAJB12Q9NXW2 375 aaKnown RBP12.58□□□□□ -0.4
PDLIM2-213ENST00000448520 SLAMF8Q9P0V8 285 aa12.58□□□□□ -0.4
PDLIM2-213ENST00000448520 PSME2Q9UL46 239 aa12.58□□□□□ -0.4
PDLIM2-213ENST00000448520 MAPRE3Q9UPY8 281 aa12.58□□□□□ -0.4
PDLIM2-213ENST00000448520 L3MBTL1Q9Y468 752 aa12.58□□□□□ -0.4
PDLIM2-213ENST00000448520 ANKHD1Q8IWZ3 2542 aaKnown RBP12.57□□□□□ -0.4
PDLIM2-213ENST00000448520 A0A1W2PP18 115 aa12.57□□□□□ -0.4
PDLIM2-213ENST00000448520 CTAG2O75638 210 aa12.57□□□□□ -0.4
PDLIM2-213ENST00000448520 UBOX5O94941 541 aa12.57□□□□□ -0.4
PDLIM2-213ENST00000448520 IL6P05231 212 aa12.57□□□□□ -0.4
PDLIM2-213ENST00000448520 FBXO45P0C2W1 286 aa12.57□□□□□ -0.4
PDLIM2-213ENST00000448520 SLC35E2P0CK97 266 aa12.57□□□□□ -0.4
PDLIM2-213ENST00000448520 PCSK2P16519 638 aa12.57□□□□□ -0.4
PDLIM2-213ENST00000448520 ADSLP30566 484 aaPredicted RBP12.57□□□□□ -0.4
PDLIM2-213ENST00000448520 ADH7P40394 386 aa12.57□□□□□ -0.4
PDLIM2-213ENST00000448520 MC3RP41968 323 aa12.57□□□□□ -0.4
PDLIM2-213ENST00000448520 KIR2DL3P43628 341 aa12.57□□□□□ -0.4
PDLIM2-213ENST00000448520 IST1P53990 364 aa12.57□□□□□ -0.4
PDLIM2-213ENST00000448520 MANFP55145 182 aaKnown RBP12.57□□□□□ -0.4
PDLIM2-213ENST00000448520 HBA1P69905 142 aa12.57□□□□□ -0.4
PDLIM2-213ENST00000448520 IRX1P78414 480 aaPredicted RBP12.57□□□□□ -0.4
PDLIM2-213ENST00000448520 MGAT2Q10469 447 aa12.57□□□□□ -0.4
PDLIM2-213ENST00000448520 GAB1Q13480 694 aa12.57□□□□□ -0.4
PDLIM2-213ENST00000448520 EXOSC7Q15024 291 aaKnown RBP12.57□□□□□ -0.4
PDLIM2-213ENST00000448520 NTRK2Q16620 822 aa12.57□□□□□ -0.4
PDLIM2-213ENST00000448520 SPRED3Q2MJR0 410 aa12.57□□□□□ -0.4
PDLIM2-213ENST00000448520 DPY19L1Q2PZI1 675 aa12.57□□□□□ -0.4
PDLIM2-213ENST00000448520 REP15Q6BDI9 236 aa12.57□□□□□ -0.4
PDLIM2-213ENST00000448520 TMEM107Q6UX40 140 aa12.57□□□□□ -0.4
PDLIM2-213ENST00000448520 RNF111Q6ZNA4 994 aa12.57□□□□□ -0.4
PDLIM2-213ENST00000448520 TRPM8Q7Z2W7 1104 aa12.57□□□□□ -0.4
PDLIM2-213ENST00000448520 WDR53Q7Z5U6 358 aaPredicted RBP12.57□□□□□ -0.4
PDLIM2-213ENST00000448520 CHDHQ8NE62 594 aaPredicted RBP12.57□□□□□ -0.4
PDLIM2-213ENST00000448520 OR4A15Q8NGL6 344 aa12.57□□□□□ -0.4
PDLIM2-213ENST00000448520 NEIL3Q8TAT5 605 aa12.57□□□□□ -0.4
PDLIM2-213ENST00000448520 RIT1Q92963 219 aa12.57□□□□□ -0.4
PDLIM2-213ENST00000448520 TP53INP1Q96A56 240 aa12.57□□□□□ -0.4
PDLIM2-213ENST00000448520 RCN3Q96D15 328 aa12.57□□□□□ -0.4
PDLIM2-213ENST00000448520 CNPPD1Q9BV87 410 aa12.57□□□□□ -0.4
PDLIM2-213ENST00000448520 ZNF703Q9H7S9 590 aaPredicted RBP12.57□□□□□ -0.4
PDLIM2-213ENST00000448520 CXorf36Q9H7Y0 433 aa12.57□□□□□ -0.4
PDLIM2-213ENST00000448520 PROK2Q9HC23 129 aa12.57□□□□□ -0.4
PDLIM2-213ENST00000448520 FAM120CQ9NX05 1096 aaKnown RBP12.57□□□□□ -0.4
PDLIM2-213ENST00000448520 MAT2BQ9NZL9 334 aa12.57□□□□□ -0.4
PDLIM2-213ENST00000448520 SPRR3Q9UBC9 169 aa12.57□□□□□ -0.4
PDLIM2-213ENST00000448520 CHCHD2Q9Y6H1 151 aaPredicted RBP12.57□□□□□ -0.4
PDLIM2-213ENST00000448520 PRSS51A0A1B0GVH4 220 aa12.56□□□□□ -0.4
PDLIM2-213ENST00000448520 CCT8L1PA6NM43 557 aa12.56□□□□□ -0.4
PDLIM2-213ENST00000448520 RNASET2O00584 256 aaKnown RBP12.56□□□□□ -0.4
PDLIM2-213ENST00000448520 TP53I11O14683 189 aa12.56□□□□□ -0.4
PDLIM2-213ENST00000448520 ANGPT2O15123 496 aa12.56□□□□□ -0.4
PDLIM2-213ENST00000448520 SLC22A2O15244 555 aa12.56□□□□□ -0.4
PDLIM2-213ENST00000448520 EPPINO95925 133 aa12.56□□□□□ -0.4
PDLIM2-213ENST00000448520 ATP1B1P05026 303 aa12.56□□□□□ -0.4
PDLIM2-213ENST00000448520 RFPL3SP0C7P2 107 aa12.56□□□□□ -0.4
PDLIM2-213ENST00000448520 CD99P14209 185 aa12.56□□□□□ -0.4
PDLIM2-213ENST00000448520 ENDOUP21128 410 aaKnown RBP12.56□□□□□ -0.4
PDLIM2-213ENST00000448520 SSTR4P31391 388 aa12.56□□□□□ -0.4
PDLIM2-213ENST00000448520 GPC1P35052 558 aa12.56□□□□□ -0.4
PDLIM2-213ENST00000448520 SOAT1P35610 550 aa12.56□□□□□ -0.4
PDLIM2-213ENST00000448520 SLC37A1P57057 533 aa12.56□□□□□ -0.4
PDLIM2-213ENST00000448520 DUSP8Q13202 625 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms