RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 STX4Q12846 297 aa16.22■□□□□ 0.19
SMC6-206ENST00000446852 BNIP3Q12983 259 aa16.22■□□□□ 0.19
SMC6-206ENST00000446852 ZC3H14Q6PJT7 736 aaKnown RBP16.22■□□□□ 0.19
SMC6-206ENST00000446852 ZNF730Q6ZMV8 503 aa16.22■□□□□ 0.19
SMC6-206ENST00000446852 GDF7Q7Z4P5 450 aa16.22■□□□□ 0.19
SMC6-206ENST00000446852 SLC25A45Q8N413 288 aa16.22■□□□□ 0.19
SMC6-206ENST00000446852 GAB3Q8WWW8 586 aa16.22■□□□□ 0.19
SMC6-206ENST00000446852 MMABQ96EY8 250 aaPredicted RBP16.22■□□□□ 0.19
SMC6-206ENST00000446852 RAB33BQ9H082 229 aa16.22■□□□□ 0.19
SMC6-206ENST00000446852 ANKRD19PQ9H560 264 aa16.22■□□□□ 0.19
SMC6-206ENST00000446852 CACYBPQ9HB71 228 aaKnown RBP16.22■□□□□ 0.19
SMC6-206ENST00000446852 SLC25A19Q9HC21 320 aa16.22■□□□□ 0.19
SMC6-206ENST00000446852 TAS2R16Q9NYV7 291 aa16.22■□□□□ 0.19
SMC6-206ENST00000446852 DNAJC27Q9NZQ0 273 aa16.22■□□□□ 0.19
SMC6-206ENST00000446852 CNIH4Q9P003 139 aa16.22■□□□□ 0.19
SMC6-206ENST00000446852 EPHA6Q9UF33 1036 aa16.22■□□□□ 0.19
SMC6-206ENST00000446852 SIT1Q9Y3P8 196 aa16.22■□□□□ 0.19
SMC6-206ENST00000446852 MUC3AQ02505 3323 aa16.22■□□□□ 0.19
SMC6-206ENST00000446852 BRINP1O60477 761 aa16.22■□□□□ 0.19
SMC6-206ENST00000446852 DBIP07108 87 aaKnown RBP16.22■□□□□ 0.19
SMC6-206ENST00000446852 NID1P14543 1247 aa16.22■□□□□ 0.19
SMC6-206ENST00000446852 SSTR4P31391 388 aa16.22■□□□□ 0.19
SMC6-206ENST00000446852 EPHA4P54764 986 aa16.22■□□□□ 0.19
SMC6-206ENST00000446852 POU6F2P78424 691 aaPredicted RBP16.22■□□□□ 0.19
SMC6-206ENST00000446852 PSG6Q00889 435 aa16.22■□□□□ 0.19
SMC6-206ENST00000446852 MRPL2Q5T653 305 aaKnown RBP16.22■□□□□ 0.19
SMC6-206ENST00000446852 CASP12Q6UXS9 341 aa16.22■□□□□ 0.19
SMC6-206ENST00000446852 P2RY8Q86VZ1 359 aa16.22■□□□□ 0.19
SMC6-206ENST00000446852 ZNF595Q8IYB9 648 aa16.22■□□□□ 0.19
SMC6-206ENST00000446852 STX19Q8N4C7 294 aa16.22■□□□□ 0.19
SMC6-206ENST00000446852 OR6C4Q8NGE1 309 aa16.22■□□□□ 0.19
SMC6-206ENST00000446852 RIT1Q92963 219 aa16.22■□□□□ 0.19
SMC6-206ENST00000446852 SLC41A3Q96GZ6 507 aa16.22■□□□□ 0.19
SMC6-206ENST00000446852 FAM46AQ96IP4 442 aaKnown RBP16.22■□□□□ 0.19
SMC6-206ENST00000446852 DUSP15Q9H1R2 295 aaPredicted RBP16.22■□□□□ 0.19
SMC6-206ENST00000446852 EGLN3Q9H6Z9 239 aa16.22■□□□□ 0.19
SMC6-206ENST00000446852 MRPS33Q9Y291 106 aaKnown RBP16.22■□□□□ 0.19
SMC6-206ENST00000446852 VPS13AQ96RL7 3174 aa16.21■□□□□ 0.19
SMC6-206ENST00000446852 A0A1B0GVT2 93 aa16.21■□□□□ 0.19
SMC6-206ENST00000446852 MAOAP21397 527 aa16.21■□□□□ 0.19
SMC6-206ENST00000446852 SLC15A1P46059 708 aa16.21■□□□□ 0.19
SMC6-206ENST00000446852 OMPP47874 163 aa16.21■□□□□ 0.19
SMC6-206ENST00000446852 EMDP50402 254 aa16.21■□□□□ 0.19
SMC6-206ENST00000446852 PLAURQ03405 335 aa16.21■□□□□ 0.19
SMC6-206ENST00000446852 IRF3Q14653 427 aa16.21■□□□□ 0.19
SMC6-206ENST00000446852 GINS1Q14691 196 aa16.21■□□□□ 0.19
SMC6-206ENST00000446852 EIPR1Q53HC9 387 aa16.21■□□□□ 0.19
SMC6-206ENST00000446852 TMEM201Q5SNT2 666 aa16.21■□□□□ 0.19
SMC6-206ENST00000446852 GARNL3Q5VVW2 1013 aa16.21■□□□□ 0.19
SMC6-206ENST00000446852 BCDIN3DQ7Z5W3 292 aaKnown RBP16.21■□□□□ 0.19
SMC6-206ENST00000446852 ZBTB46Q86UZ6 589 aa16.21■□□□□ 0.19
SMC6-206ENST00000446852 TCEANCQ8N8B7 351 aa16.21■□□□□ 0.19
SMC6-206ENST00000446852 TBC1D15Q8TC07 691 aa16.21■□□□□ 0.19
SMC6-206ENST00000446852 FCGR1BQ92637 280 aa16.21■□□□□ 0.19
SMC6-206ENST00000446852 ZDHHC12Q96GR4 267 aa16.21■□□□□ 0.19
SMC6-206ENST00000446852 ALOXE3Q9BYJ1 711 aa16.21■□□□□ 0.19
SMC6-206ENST00000446852 CHRNA10Q9GZZ6 450 aa16.21■□□□□ 0.19
SMC6-206ENST00000446852 DSN1Q9H410 356 aa16.21■□□□□ 0.19
SMC6-206ENST00000446852 PRTFDC1Q9NRG1 225 aa16.21■□□□□ 0.19
SMC6-206ENST00000446852 DTX4Q9Y2E6 619 aa16.21■□□□□ 0.19
SMC6-206ENST00000446852 PI4KAP42356 2102 aa16.21■□□□□ 0.19
SMC6-206ENST00000446852 FITM1A5D6W6 292 aa16.21■□□□□ 0.18
SMC6-206ENST00000446852 M0R082 166 aa16.21■□□□□ 0.18
SMC6-206ENST00000446852 COQ9O75208 318 aa16.21■□□□□ 0.18
SMC6-206ENST00000446852 KCNK2O95069 426 aa16.21■□□□□ 0.18
SMC6-206ENST00000446852 OR5F1O95221 314 aa16.21■□□□□ 0.18
SMC6-206ENST00000446852 BCL10O95999 233 aa16.21■□□□□ 0.18
SMC6-206ENST00000446852 PTHP01270 115 aa16.21■□□□□ 0.18
SMC6-206ENST00000446852 GKN3PP0CG01 181 aa16.21■□□□□ 0.18
SMC6-206ENST00000446852 ADORA3P0DMS8 318 aa16.21■□□□□ 0.18
SMC6-206ENST00000446852 MYF5P13349 255 aa16.21■□□□□ 0.18
SMC6-206ENST00000446852 GSTM3P21266 225 aa16.21■□□□□ 0.18
SMC6-206ENST00000446852 LIPAP38571 399 aa16.21■□□□□ 0.18
SMC6-206ENST00000446852 GIPRP48546 466 aa16.21■□□□□ 0.18
SMC6-206ENST00000446852 MLLT1Q03111 559 aaPredicted RBP16.21■□□□□ 0.18
SMC6-206ENST00000446852 CFHR1Q03591 330 aa16.21■□□□□ 0.18
SMC6-206ENST00000446852 ACSM5Q6NUN0 579 aa16.21■□□□□ 0.18
SMC6-206ENST00000446852 SLC35F3Q8IY50 421 aa16.21■□□□□ 0.18
SMC6-206ENST00000446852 TMEM255BQ8WV15 326 aa16.21■□□□□ 0.18
SMC6-206ENST00000446852 ACOT11Q8WXI4 607 aaPredicted RBP16.21■□□□□ 0.18
SMC6-206ENST00000446852 RBM18Q96H35 190 aaKnown RBP16.21■□□□□ 0.18
SMC6-206ENST00000446852 ITPAQ9BY32 194 aa16.21■□□□□ 0.18
SMC6-206ENST00000446852 FOLH1BQ9HBA9 442 aa16.21■□□□□ 0.18
SMC6-206ENST00000446852 CNOT2Q9NZN8 540 aaKnown RBP16.21■□□□□ 0.18
SMC6-206ENST00000446852 SEC16AO15027 2179 aa16.2■□□□□ 0.18
SMC6-206ENST00000446852 ADAMTS20P59510 1910 aa16.2■□□□□ 0.18
SMC6-206ENST00000446852 IGHV1OR21-1A0A087WYE8 117 aa16.2■□□□□ 0.18
SMC6-206ENST00000446852 CDHR4A6H8M9 788 aa16.2■□□□□ 0.18
SMC6-206ENST00000446852 PRKYO43930 277 aa16.2■□□□□ 0.18
SMC6-206ENST00000446852 AK1P00568 194 aa16.2■□□□□ 0.18
SMC6-206ENST00000446852 GIMD1P0DJR0 217 aa16.2■□□□□ 0.18
SMC6-206ENST00000446852 ATXN8OSP0DMR3 200 aa16.2■□□□□ 0.18
SMC6-206ENST00000446852 HTR2AP28223 471 aa16.2■□□□□ 0.18
SMC6-206ENST00000446852 CDK5Q00535 292 aa16.2■□□□□ 0.18
SMC6-206ENST00000446852 DECR1Q16698 335 aa16.2■□□□□ 0.18
SMC6-206ENST00000446852 TCTE1Q5JU00 501 aa16.2■□□□□ 0.18
SMC6-206ENST00000446852 NIPAL1Q6NVV3 410 aa16.2■□□□□ 0.18
SMC6-206ENST00000446852 TSSK4Q6SA08 328 aa16.2■□□□□ 0.18
SMC6-206ENST00000446852 OR4N2Q8NGD1 307 aa16.2■□□□□ 0.18
SMC6-206ENST00000446852 OR8D4Q8NGM9 314 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms