RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 OLFM2O95897 454 aa8.07□□□□□ -1.12
PTPN3-204ENST00000446349 CH25HO95992 272 aa8.07□□□□□ -1.12
PTPN3-204ENST00000446349 ZNF16P17020 682 aaPredicted RBP8.07□□□□□ -1.12
PTPN3-204ENST00000446349 HOXD9P28356 352 aaPredicted RBP8.07□□□□□ -1.12
PTPN3-204ENST00000446349 MMP12P39900 470 aa8.07□□□□□ -1.12
PTPN3-204ENST00000446349 ZNF140P52738 457 aaPredicted RBP8.07□□□□□ -1.12
PTPN3-204ENST00000446349 HK3P52790 923 aa8.07□□□□□ -1.12
PTPN3-204ENST00000446349 TSC22D1Q15714 1073 aa8.07□□□□□ -1.12
PTPN3-204ENST00000446349 NADSYN1Q6IA69 706 aa8.07□□□□□ -1.12
PTPN3-204ENST00000446349 GDPGP1Q6ZNW5 385 aa8.07□□□□□ -1.12
PTPN3-204ENST00000446349 KMT5CQ86Y97 462 aa8.07□□□□□ -1.12
PTPN3-204ENST00000446349 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.07□□□□□ -1.12
PTPN3-204ENST00000446349 ZNF597Q96LX8 424 aa8.07□□□□□ -1.12
PTPN3-204ENST00000446349 SLC35A1P78382 337 aa8.07□□□□□ -1.12
PTPN3-204ENST00000446349 TAZQ16635 292 aa8.07□□□□□ -1.12
PTPN3-204ENST00000446349 MSS51Q4VC12 460 aa8.07□□□□□ -1.12
PTPN3-204ENST00000446349 AKIRIN2Q53H80 203 aa8.07□□□□□ -1.12
PTPN3-204ENST00000446349 TMEM244Q5VVB8 128 aa8.07□□□□□ -1.12
PTPN3-204ENST00000446349 MFSD8Q8NHS3 518 aa8.07□□□□□ -1.12
PTPN3-204ENST00000446349 ATG5Q9H1Y0 275 aa8.07□□□□□ -1.12
PTPN3-204ENST00000446349 ZNF442Q9H7R0 627 aa8.07□□□□□ -1.12
PTPN3-204ENST00000446349 MYOTQ9UBF9 498 aa8.07□□□□□ -1.12
PTPN3-204ENST00000446349 K7ERQ8 282 aa8.07□□□□□ -1.12
PTPN3-204ENST00000446349 CPNE6O95741 557 aa8.07□□□□□ -1.12
PTPN3-204ENST00000446349 EN2P19622 333 aaPredicted RBP8.07□□□□□ -1.12
PTPN3-204ENST00000446349 AOAHP28039 575 aa8.07□□□□□ -1.12
PTPN3-204ENST00000446349 AGTR1P30556 359 aa8.07□□□□□ -1.12
PTPN3-204ENST00000446349 CDKN2DP55273 166 aa8.07□□□□□ -1.12
PTPN3-204ENST00000446349 MAB21L1Q13394 359 aa8.07□□□□□ -1.12
PTPN3-204ENST00000446349 ZNF542PQ5EBM4 170 aa8.07□□□□□ -1.12
PTPN3-204ENST00000446349 TMEM69Q5SWH9 247 aa8.07□□□□□ -1.12
PTPN3-204ENST00000446349 KDELC1Q6UW63 502 aa8.07□□□□□ -1.12
PTPN3-204ENST00000446349 ARSKQ6UWY0 536 aa8.07□□□□□ -1.12
PTPN3-204ENST00000446349 SLC22A16Q86VW1 577 aa8.07□□□□□ -1.12
PTPN3-204ENST00000446349 TSPYL5Q86VY4 417 aaPredicted RBP8.07□□□□□ -1.12
PTPN3-204ENST00000446349 GRAMD2AQ8IUY3 354 aa8.07□□□□□ -1.12
PTPN3-204ENST00000446349 DPH2Q9BQC3 489 aaPredicted RBP8.07□□□□□ -1.12
PTPN3-204ENST00000446349 SRA1Q9HD15 236 aaKnown RBP8.07□□□□□ -1.12
PTPN3-204ENST00000446349 B8ZZF3 427 aa8.07□□□□□ -1.12
PTPN3-204ENST00000446349 VAMP1P23763 118 aa8.07□□□□□ -1.12
PTPN3-204ENST00000446349 AQP4P55087 323 aa8.07□□□□□ -1.12
PTPN3-204ENST00000446349 EGFLAMQ63HQ2 1017 aa8.07□□□□□ -1.12
PTPN3-204ENST00000446349 NAXEQ8NCW5 288 aa8.07□□□□□ -1.12
PTPN3-204ENST00000446349 OR51G2Q8NGK0 314 aa8.07□□□□□ -1.12
PTPN3-204ENST00000446349 NEIL3Q8TAT5 605 aa8.07□□□□□ -1.12
PTPN3-204ENST00000446349 CCDC115Q96NT0 180 aa8.07□□□□□ -1.12
PTPN3-204ENST00000446349 ZNF587Q96SQ5 575 aaPredicted RBP8.07□□□□□ -1.12
PTPN3-204ENST00000446349 WASH6PQ9NQA3 447 aa8.07□□□□□ -1.12
PTPN3-204ENST00000446349 RGPD4Q7Z3J3 1758 aa8.07□□□□□ -1.12
PTPN3-204ENST00000446349 SDHDO14521 159 aa8.07□□□□□ -1.12
PTPN3-204ENST00000446349 GLDCP23378 1020 aa8.07□□□□□ -1.12
PTPN3-204ENST00000446349 KCTD21Q4G0X4 260 aa8.07□□□□□ -1.12
PTPN3-204ENST00000446349 KHDC1Q4VXA5 237 aaKnown RBP8.07□□□□□ -1.12
PTPN3-204ENST00000446349 ZMAT1Q5H9K5 638 aa8.07□□□□□ -1.12
PTPN3-204ENST00000446349 TMEM184AQ6ZMB5 413 aa8.07□□□□□ -1.12
PTPN3-204ENST00000446349 TSPAN33Q86UF1 283 aa8.07□□□□□ -1.12
PTPN3-204ENST00000446349 CNTN4Q8IWV2 1026 aa8.07□□□□□ -1.12
PTPN3-204ENST00000446349 ZNF417Q8TAU3 575 aa8.07□□□□□ -1.12
PTPN3-204ENST00000446349 ZNF160Q9HCG1 818 aa8.07□□□□□ -1.12
PTPN3-204ENST00000446349 DNAJB11Q9UBS4 358 aa8.07□□□□□ -1.12
PTPN3-204ENST00000446349 CNOT11Q9UKZ1 510 aaKnown RBP8.07□□□□□ -1.12
PTPN3-204ENST00000446349 SHROOM3Q8TF72 1996 aa8.07□□□□□ -1.12
PTPN3-204ENST00000446349 TMEM265A0A087WTH1 108 aa8.07□□□□□ -1.12
PTPN3-204ENST00000446349 IFNA2P01563 188 aa8.07□□□□□ -1.12
PTPN3-204ENST00000446349 STATHP02808 62 aa8.07□□□□□ -1.12
PTPN3-204ENST00000446349 RPS23P62266 143 aaKnown RBP8.07□□□□□ -1.12
PTPN3-204ENST00000446349 SRYQ05066 204 aa8.07□□□□□ -1.12
PTPN3-204ENST00000446349 SLC5A12Q1EHB4 618 aa8.07□□□□□ -1.12
PTPN3-204ENST00000446349 TRIM61Q5EBN2 209 aa8.07□□□□□ -1.12
PTPN3-204ENST00000446349 UGT2A3Q6UWM9 527 aa8.07□□□□□ -1.12
PTPN3-204ENST00000446349 AMIGO3Q86WK7 504 aa8.07□□□□□ -1.12
PTPN3-204ENST00000446349 OR4N5Q8IXE1 308 aa8.07□□□□□ -1.12
PTPN3-204ENST00000446349 GALNT15Q8N3T1 639 aa8.07□□□□□ -1.12
PTPN3-204ENST00000446349 OR5AR1Q8NGP9 310 aa8.07□□□□□ -1.12
PTPN3-204ENST00000446349 CD200R1Q8TD46 325 aa8.07□□□□□ -1.12
PTPN3-204ENST00000446349 UHRF1Q96T88 793 aaPredicted RBP8.07□□□□□ -1.12
PTPN3-204ENST00000446349 RBM24Q9BX46 236 aaKnown RBP8.07□□□□□ -1.12
PTPN3-204ENST00000446349 VNN3Q9NY84 501 aa8.07□□□□□ -1.12
PTPN3-204ENST00000446349 SLC7A7Q9UM01 511 aa8.07□□□□□ -1.12
PTPN3-204ENST00000446349 CDRT1O95170 752 aa8.06□□□□□ -1.12
PTPN3-204ENST00000446349 PKLRP30613 574 aa8.06□□□□□ -1.12
PTPN3-204ENST00000446349 CARD17Q5XLA6 110 aa8.06□□□□□ -1.12
PTPN3-204ENST00000446349 LCN8Q6JVE9 175 aa8.06□□□□□ -1.12
PTPN3-204ENST00000446349 NIPAL3Q6P499 406 aa8.06□□□□□ -1.12
PTPN3-204ENST00000446349 BEND4Q6ZU67 534 aa8.06□□□□□ -1.12
PTPN3-204ENST00000446349 ZNF554Q86TJ5 538 aa8.06□□□□□ -1.12
PTPN3-204ENST00000446349 ISCA2Q86U28 154 aa8.06□□□□□ -1.12
PTPN3-204ENST00000446349 ADIPOR2Q86V24 386 aa8.06□□□□□ -1.12
PTPN3-204ENST00000446349 OR5D14Q8NGL3 314 aa8.06□□□□□ -1.12
PTPN3-204ENST00000446349 MSI2Q96DH6 328 aaKnown RBP8.06□□□□□ -1.12
PTPN3-204ENST00000446349 PIGQQ9BRB3 760 aa8.06□□□□□ -1.12
PTPN3-204ENST00000446349 FAM118AQ9NWS6 357 aa8.06□□□□□ -1.12
PTPN3-204ENST00000446349 B3GAT1Q9P2W7 334 aa8.06□□□□□ -1.12
PTPN3-204ENST00000446349 LAMB2P55268 1798 aa8.06□□□□□ -1.12
PTPN3-204ENST00000446349 SOCS2O14508 198 aa8.06□□□□□ -1.12
PTPN3-204ENST00000446349 MRPS10P82664 201 aaKnown RBP8.06□□□□□ -1.12
PTPN3-204ENST00000446349 OGFOD2Q6N063 350 aa8.06□□□□□ -1.12
PTPN3-204ENST00000446349 CMIPQ8IY22 773 aa8.06□□□□□ -1.12
PTPN3-204ENST00000446349 TMEM19Q96HH6 336 aa8.06□□□□□ -1.12
PTPN3-204ENST00000446349 IL17FQ96PD4 163 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms