RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 MASP1P48740 699 aa7.46□□□□□ -1.22
SMG1-202ENST00000446231 CTRB2Q6GPI1 263 aa7.46□□□□□ -1.22
SMG1-202ENST00000446231 SPRYD4Q8WW59 207 aaPredicted RBP7.46□□□□□ -1.22
SMG1-202ENST00000446231 RERGQ96A58 199 aaPredicted RBP7.46□□□□□ -1.22
SMG1-202ENST00000446231 ASB6Q9NWX5 421 aa7.46□□□□□ -1.22
SMG1-202ENST00000446231 ZFP37Q9Y6Q3 630 aaPredicted RBP7.46□□□□□ -1.22
SMG1-202ENST00000446231 ZNF736B4DX44 427 aaPredicted RBP7.46□□□□□ -1.22
SMG1-202ENST00000446231 KDELR3O43731 214 aa7.46□□□□□ -1.22
SMG1-202ENST00000446231 ZNF20P17024 532 aa7.46□□□□□ -1.22
SMG1-202ENST00000446231 AKR1C4P17516 323 aa7.46□□□□□ -1.22
SMG1-202ENST00000446231 PRSS3P35030 304 aa7.46□□□□□ -1.22
SMG1-202ENST00000446231 JAG1P78504 1218 aa7.46□□□□□ -1.22
SMG1-202ENST00000446231 H7C1Q1 480 aa7.46□□□□□ -1.22
SMG1-202ENST00000446231 FZD9O00144 591 aa7.46□□□□□ -1.22
SMG1-202ENST00000446231 ST3GAL3Q11203 375 aa7.46□□□□□ -1.22
SMG1-202ENST00000446231 CMIPQ8IY22 773 aa7.46□□□□□ -1.22
SMG1-202ENST00000446231 TMEM130Q8N3G9 435 aa7.46□□□□□ -1.22
SMG1-202ENST00000446231 OR2L8Q8NGY9 312 aa7.46□□□□□ -1.22
SMG1-202ENST00000446231 NUDT8Q8WV74 236 aa7.46□□□□□ -1.22
SMG1-202ENST00000446231 ZNF225Q9UK10 706 aa7.46□□□□□ -1.22
SMG1-202ENST00000446231 TMEM72A0PK05 275 aa7.46□□□□□ -1.22
SMG1-202ENST00000446231 RAD52P43351 418 aa7.46□□□□□ -1.22
SMG1-202ENST00000446231 CLDN20P56880 219 aa7.46□□□□□ -1.22
SMG1-202ENST00000446231 CCNJQ5T5M9 372 aa7.46□□□□□ -1.22
SMG1-202ENST00000446231 OR52N2Q8NGI0 321 aa7.46□□□□□ -1.22
SMG1-202ENST00000446231 STK35Q8TDR2 534 aa7.46□□□□□ -1.22
SMG1-202ENST00000446231 PTAFRP25105 342 aa7.45□□□□□ -1.22
SMG1-202ENST00000446231 CHATP28329 748 aa7.45□□□□□ -1.22
SMG1-202ENST00000446231 AHRP35869 848 aa7.45□□□□□ -1.22
SMG1-202ENST00000446231 CHAF1BQ13112 559 aa7.45□□□□□ -1.22
SMG1-202ENST00000446231 GAS6Q14393 721 aa7.45□□□□□ -1.22
SMG1-202ENST00000446231 C14orf28Q4W4Y0 310 aa7.45□□□□□ -1.22
SMG1-202ENST00000446231 GPR135Q8IZ08 494 aa7.45□□□□□ -1.22
SMG1-202ENST00000446231 C9orf62Q8N4C0 152 aa7.45□□□□□ -1.22
SMG1-202ENST00000446231 OR5P2Q8WZ92 322 aa7.45□□□□□ -1.22
SMG1-202ENST00000446231 SLC6A20Q9NP91 592 aa7.45□□□□□ -1.22
SMG1-202ENST00000446231 NME2P22392 152 aa7.45□□□□□ -1.22
SMG1-202ENST00000446231 EPHA2P29317 976 aa7.45□□□□□ -1.22
SMG1-202ENST00000446231 CAMLGP49069 296 aa7.45□□□□□ -1.22
SMG1-202ENST00000446231 ODF4Q2M2E3 257 aa7.45□□□□□ -1.22
SMG1-202ENST00000446231 NLRP8Q86W28 1048 aa7.45□□□□□ -1.22
SMG1-202ENST00000446231 NKX6-2Q9C056 277 aaPredicted RBP7.45□□□□□ -1.22
SMG1-202ENST00000446231 NRIP3Q9NQ35 241 aa7.45□□□□□ -1.22
SMG1-202ENST00000446231 CNIH4Q9P003 139 aa7.45□□□□□ -1.22
SMG1-202ENST00000446231 SNX11Q9Y5W9 270 aa7.45□□□□□ -1.22
SMG1-202ENST00000446231 TGFB1P01137 390 aa7.45□□□□□ -1.22
SMG1-202ENST00000446231 ACP2P11117 423 aa7.45□□□□□ -1.22
SMG1-202ENST00000446231 CORO1AP31146 461 aaKnown RBP7.45□□□□□ -1.22
SMG1-202ENST00000446231 HNF1BP35680 557 aa7.45□□□□□ -1.22
SMG1-202ENST00000446231 TIGD5Q53EQ6 642 aa7.45□□□□□ -1.22
SMG1-202ENST00000446231 ACSM3Q53FZ2 586 aa7.45□□□□□ -1.22
SMG1-202ENST00000446231 SLC35F2Q8IXU6 374 aa7.45□□□□□ -1.22
SMG1-202ENST00000446231 POTEKPQ9BYX7 375 aa7.45□□□□□ -1.22
SMG1-202ENST00000446231 H3BSH0 61 aa7.45□□□□□ -1.22
SMG1-202ENST00000446231 KCNK5O95279 499 aa7.45□□□□□ -1.22
SMG1-202ENST00000446231 SDC1P18827 310 aa7.45□□□□□ -1.22
SMG1-202ENST00000446231 PUM1Q14671 1186 aaKnown RBP eCLIP7.45□□□□□ -1.22
SMG1-202ENST00000446231 BCHEP06276 602 aa7.45□□□□□ -1.22
SMG1-202ENST00000446231 GKP32189 559 aa7.45□□□□□ -1.22
SMG1-202ENST00000446231 CAP1Q01518 475 aa7.45□□□□□ -1.22
SMG1-202ENST00000446231 TUBB1Q9H4B7 451 aa7.45□□□□□ -1.22
SMG1-202ENST00000446231 SCO2O43819 266 aa7.45□□□□□ -1.22
SMG1-202ENST00000446231 VAMP2P63027 116 aa7.45□□□□□ -1.22
SMG1-202ENST00000446231 PDSS1Q5T2R2 415 aa7.45□□□□□ -1.22
SMG1-202ENST00000446231 OR5M3Q8NGP4 307 aa7.45□□□□□ -1.22
SMG1-202ENST00000446231 OPALINQ96PE5 141 aa7.45□□□□□ -1.22
SMG1-202ENST00000446231 WRAP53Q9BUR4 548 aaKnown RBP7.45□□□□□ -1.22
SMG1-202ENST00000446231 ABCA4P78363 2273 aa7.45□□□□□ -1.22
SMG1-202ENST00000446231 E2F3O00716 465 aa7.45□□□□□ -1.22
SMG1-202ENST00000446231 PRICKLE3O43900 615 aaPredicted RBP7.45□□□□□ -1.22
SMG1-202ENST00000446231 NUDT14O95848 222 aa7.45□□□□□ -1.22
SMG1-202ENST00000446231 STK19P49842 368 aaPredicted RBP7.45□□□□□ -1.22
SMG1-202ENST00000446231 MECP2P51608 486 aaKnown RBP7.45□□□□□ -1.22
SMG1-202ENST00000446231 TMEM81Q6P7N7 255 aa7.45□□□□□ -1.22
SMG1-202ENST00000446231 AGTRAPQ6RW13 159 aa7.45□□□□□ -1.22
SMG1-202ENST00000446231 OR1M1Q8NGA1 313 aa7.45□□□□□ -1.22
SMG1-202ENST00000446231 DCUN1D4Q92564 292 aa7.45□□□□□ -1.22
SMG1-202ENST00000446231 FOXRED1Q96CU9 486 aaPredicted RBP7.45□□□□□ -1.22
SMG1-202ENST00000446231 MCHR1Q99705 422 aa7.45□□□□□ -1.22
SMG1-202ENST00000446231 SEC22CQ9BRL7 303 aa7.45□□□□□ -1.22
SMG1-202ENST00000446231 RPS10-NUDT3A0A1W2PQS6 291 aa7.45□□□□□ -1.22
SMG1-202ENST00000446231 MED6O75586 246 aa7.45□□□□□ -1.22
SMG1-202ENST00000446231 GDNFP39905 211 aa7.45□□□□□ -1.22
SMG1-202ENST00000446231 RPS10P46783 165 aaKnown RBP7.45□□□□□ -1.22
SMG1-202ENST00000446231 MINDY4Q4G0A6 757 aa7.45□□□□□ -1.22
SMG1-202ENST00000446231 OTUB2Q96DC9 234 aa7.45□□□□□ -1.22
SMG1-202ENST00000446231 GPER1Q99527 375 aa7.45□□□□□ -1.22
SMG1-202ENST00000446231 ASAH2Q9NR71 780 aa7.45□□□□□ -1.22
SMG1-202ENST00000446231 ADAM18Q9Y3Q7 739 aa7.45□□□□□ -1.22
SMG1-202ENST00000446231 TRAV18A0A075B6X5 111 aa7.45□□□□□ -1.22
SMG1-202ENST00000446231 IMPA2O14732 288 aa7.45□□□□□ -1.22
SMG1-202ENST00000446231 GATCO43716 136 aaKnown RBP7.45□□□□□ -1.22
SMG1-202ENST00000446231 PRSS56P0CW18 603 aa7.45□□□□□ -1.22
SMG1-202ENST00000446231 ADGRF1Q5T601 910 aa7.45□□□□□ -1.22
SMG1-202ENST00000446231 NAA40Q86UY6 237 aa7.45□□□□□ -1.22
SMG1-202ENST00000446231 CLECL1Q8IZS7 167 aa7.45□□□□□ -1.22
SMG1-202ENST00000446231 SUN3Q8TAQ9 357 aa7.45□□□□□ -1.22
SMG1-202ENST00000446231 PGAP2Q9UHJ9 254 aa7.45□□□□□ -1.22
SMG1-202ENST00000446231 OR5K3A6NET4 321 aa7.45□□□□□ -1.22
SMG1-202ENST00000446231 CELF2O95319 508 aaKnown RBP7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms