RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 KCNJ15Q99712 375 aa13.31□□□□□ -0.28
ERCC3-203ENST00000445889 GTPBP2Q9BX10 602 aaKnown RBP13.31□□□□□ -0.28
ERCC3-203ENST00000445889 IMP3Q9NV31 184 aaKnown RBP13.31□□□□□ -0.28
ERCC3-203ENST00000445889 MGAT4AQ9UM21 535 aa13.31□□□□□ -0.28
ERCC3-203ENST00000445889 LIPT1Q9Y234 373 aa13.31□□□□□ -0.28
ERCC3-203ENST00000445889 CENPVL1A0A0U1RR11 272 aa13.31□□□□□ -0.28
ERCC3-203ENST00000445889 SNTNA6NMZ2 147 aa13.31□□□□□ -0.28
ERCC3-203ENST00000445889 BTN3A3O00478 584 aa13.31□□□□□ -0.28
ERCC3-203ENST00000445889 SLC43A1O75387 559 aa13.31□□□□□ -0.28
ERCC3-203ENST00000445889 HLA-DQB1P01920 261 aa13.31□□□□□ -0.28
ERCC3-203ENST00000445889 CD3GP09693 182 aa13.31□□□□□ -0.28
ERCC3-203ENST00000445889 PEPDP12955 493 aa13.31□□□□□ -0.28
ERCC3-203ENST00000445889 CXCL3P19876 107 aa13.31□□□□□ -0.28
ERCC3-203ENST00000445889 KELP23276 732 aa13.31□□□□□ -0.28
ERCC3-203ENST00000445889 ACVR1BP36896 505 aa13.31□□□□□ -0.28
ERCC3-203ENST00000445889 ADAM15Q13444 863 aa13.31□□□□□ -0.28
ERCC3-203ENST00000445889 C6orf132Q5T0Z8 1188 aa13.31□□□□□ -0.28
ERCC3-203ENST00000445889 CCNJQ5T5M9 372 aa13.31□□□□□ -0.28
ERCC3-203ENST00000445889 LCTLQ6UWM7 567 aa13.31□□□□□ -0.28
ERCC3-203ENST00000445889 CREB3L2Q70SY1 520 aa13.31□□□□□ -0.28
ERCC3-203ENST00000445889 OR4N5Q8IXE1 308 aa13.31□□□□□ -0.28
ERCC3-203ENST00000445889 GPR135Q8IZ08 494 aa13.31□□□□□ -0.28
ERCC3-203ENST00000445889 OMA1Q96E52 524 aa13.31□□□□□ -0.28
ERCC3-203ENST00000445889 ZC3HAV1LQ96H79 300 aaKnown RBP13.31□□□□□ -0.28
ERCC3-203ENST00000445889 ZFP3Q96NJ6 502 aa13.31□□□□□ -0.28
ERCC3-203ENST00000445889 THAP7Q9BT49 309 aaPredicted RBP13.31□□□□□ -0.28
ERCC3-203ENST00000445889 H2AFY2Q9P0M6 372 aaPredicted RBP13.31□□□□□ -0.28
ERCC3-203ENST00000445889 NCKAP1Q9Y2A7 1128 aa13.31□□□□□ -0.28
ERCC3-203ENST00000445889 EXOSC1Q9Y3B2 195 aaKnown RBP13.31□□□□□ -0.28
ERCC3-203ENST00000445889 PLEKHM1Q9Y4G2 1056 aa13.31□□□□□ -0.28
ERCC3-203ENST00000445889 IGKV1-8A0A0C4DH67 115 aa13.3□□□□□ -0.28
ERCC3-203ENST00000445889 MOSPD3O75425 235 aa13.3□□□□□ -0.28
ERCC3-203ENST00000445889 TOXO94900 526 aa13.3□□□□□ -0.28
ERCC3-203ENST00000445889 ZIC2O95409 532 aaPredicted RBP13.3□□□□□ -0.28
ERCC3-203ENST00000445889 CLUP10909 449 aa13.3□□□□□ -0.28
ERCC3-203ENST00000445889 ENPP1P22413 925 aa13.3□□□□□ -0.28
ERCC3-203ENST00000445889 ST8SIA6P61647 398 aa13.3□□□□□ -0.28
ERCC3-203ENST00000445889 AGERQ15109 404 aa13.3□□□□□ -0.28
ERCC3-203ENST00000445889 LIX1LQ8IVB5 337 aa13.3□□□□□ -0.28
ERCC3-203ENST00000445889 C9orf62Q8N4C0 152 aa13.3□□□□□ -0.28
ERCC3-203ENST00000445889 TMEM99Q8N816 258 aa13.3□□□□□ -0.28
ERCC3-203ENST00000445889 FBXO15Q8NCQ5 510 aaPredicted RBP13.3□□□□□ -0.28
ERCC3-203ENST00000445889 SETD7Q8WTS6 366 aaKnown RBP13.3□□□□□ -0.28
ERCC3-203ENST00000445889 FERD3LQ96RJ6 166 aa13.3□□□□□ -0.28
ERCC3-203ENST00000445889 ABHD1Q96SE0 405 aa13.3□□□□□ -0.28
ERCC3-203ENST00000445889 ZNF649Q9BS31 505 aa13.3□□□□□ -0.28
ERCC3-203ENST00000445889 MED28Q9H204 178 aa13.3□□□□□ -0.28
ERCC3-203ENST00000445889 OR51V1Q9H2C8 321 aa13.3□□□□□ -0.28
ERCC3-203ENST00000445889 CCDC86Q9H6F5 360 aaKnown RBP13.3□□□□□ -0.28
ERCC3-203ENST00000445889 TAS2R7Q9NYW3 318 aa13.3□□□□□ -0.28
ERCC3-203ENST00000445889 MRPL15Q9P015 296 aaKnown RBP13.3□□□□□ -0.28
ERCC3-203ENST00000445889 TNFRSF10DQ9UBN6 386 aa13.3□□□□□ -0.28
ERCC3-203ENST00000445889 RASD1Q9Y272 281 aa13.3□□□□□ -0.28
ERCC3-203ENST00000445889 SPEF1Q9Y4P9 236 aa13.3□□□□□ -0.28
ERCC3-203ENST00000445889 A0A1W2PPV9 198 aa13.3□□□□□ -0.28
ERCC3-203ENST00000445889 CIB4A0PJX0 185 aa13.3□□□□□ -0.28
ERCC3-203ENST00000445889 OR52A4PA6NMU1 304 aa13.3□□□□□ -0.28
ERCC3-203ENST00000445889 GYPBP06028 91 aa13.3□□□□□ -0.28
ERCC3-203ENST00000445889 CERS1P27544 350 aa13.3□□□□□ -0.28
ERCC3-203ENST00000445889 OMPP47874 163 aa13.3□□□□□ -0.28
ERCC3-203ENST00000445889 TAS2R38P59533 333 aa13.3□□□□□ -0.28
ERCC3-203ENST00000445889 RPS7P62081 194 aaKnown RBP13.3□□□□□ -0.28
ERCC3-203ENST00000445889 MZT2AQ6P582 158 aa13.3□□□□□ -0.28
ERCC3-203ENST00000445889 CD200R1LQ6Q8B3 271 aa13.3□□□□□ -0.28
ERCC3-203ENST00000445889 KLHL36Q8N4N3 616 aa13.3□□□□□ -0.28
ERCC3-203ENST00000445889 NATD1Q8N6N6 113 aa13.3□□□□□ -0.28
ERCC3-203ENST00000445889 OR10H4Q8NGA5 316 aa13.3□□□□□ -0.28
ERCC3-203ENST00000445889 OR11H4Q8NGC9 324 aa13.3□□□□□ -0.28
ERCC3-203ENST00000445889 SUN3Q8TAQ9 357 aa13.3□□□□□ -0.28
ERCC3-203ENST00000445889 ZNF431Q8TF32 576 aaPredicted RBP13.3□□□□□ -0.28
ERCC3-203ENST00000445889 ZCCHC2Q9C0B9 1178 aaKnown RBP13.3□□□□□ -0.28
ERCC3-203ENST00000445889 PAK6Q9NQU5 681 aaPredicted RBP13.3□□□□□ -0.28
ERCC3-203ENST00000445889 ENAMQ9NRM1 1142 aa13.3□□□□□ -0.28
ERCC3-203ENST00000445889 FBXL4Q9UKA2 621 aa13.3□□□□□ -0.28
ERCC3-203ENST00000445889 SCN2AQ99250 2005 aa13.3□□□□□ -0.28
ERCC3-203ENST00000445889 HEATR5BQ9P2D3 2071 aa13.3□□□□□ -0.28
ERCC3-203ENST00000445889 OTOL1A6NHN0 477 aaPredicted RBP13.29□□□□□ -0.28
ERCC3-203ENST00000445889 SURF4O15260 269 aa13.29□□□□□ -0.28
ERCC3-203ENST00000445889 RHOP08100 348 aa13.29□□□□□ -0.28
ERCC3-203ENST00000445889 HCCSP53701 268 aa13.29□□□□□ -0.28
ERCC3-203ENST00000445889 ERVFC1P60507 584 aa13.29□□□□□ -0.28
ERCC3-203ENST00000445889 CSNK1G2P78368 415 aa13.29□□□□□ -0.28
ERCC3-203ENST00000445889 E2F1Q01094 437 aa13.29□□□□□ -0.28
ERCC3-203ENST00000445889 TGM3Q08188 693 aa13.29□□□□□ -0.28
ERCC3-203ENST00000445889 NDUFA9Q16795 377 aa13.29□□□□□ -0.28
ERCC3-203ENST00000445889 FNDC3BQ53EP0 1204 aaKnown RBP13.29□□□□□ -0.28
ERCC3-203ENST00000445889 AADACL4Q5VUY2 407 aa13.29□□□□□ -0.28
ERCC3-203ENST00000445889 PLPP4Q5VZY2 271 aa13.29□□□□□ -0.28
ERCC3-203ENST00000445889 ZNF767PQ75MW2 155 aa13.29□□□□□ -0.28
ERCC3-203ENST00000445889 DCUN1D3Q8IWE4 304 aa13.29□□□□□ -0.28
ERCC3-203ENST00000445889 IZUMO1Q8IYV9 350 aa13.29□□□□□ -0.28
ERCC3-203ENST00000445889 ATP13A2Q9NQ11 1180 aa13.29□□□□□ -0.28
ERCC3-203ENST00000445889 NKIRAS2Q9NYR9 191 aa13.29□□□□□ -0.28
ERCC3-203ENST00000445889 CBLCQ9ULV8 474 aa13.29□□□□□ -0.28
ERCC3-203ENST00000445889 NPIPA5A0A0B4J1W7 369 aa13.29□□□□□ -0.28
ERCC3-203ENST00000445889 NPIPA7E9PJI5 369 aa13.29□□□□□ -0.28
ERCC3-203ENST00000445889 CHP2O43745 196 aa13.29□□□□□ -0.28
ERCC3-203ENST00000445889 LILRB3O75022 631 aa13.29□□□□□ -0.28
ERCC3-203ENST00000445889 GKN3PP0CG01 181 aa13.29□□□□□ -0.28
ERCC3-203ENST00000445889 NPIPA8P0DM63 369 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms