RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 MEX3DQ86XN8 651 aaKnown RBP15.66■□□□□ 0.1
TCOF1-206ENST00000445265 LAX1Q8IWV1 398 aa15.66■□□□□ 0.1
TCOF1-206ENST00000445265 DEDD2Q8WXF8 326 aa15.66■□□□□ 0.1
TCOF1-206ENST00000445265 PDXPQ96GD0 296 aa15.66■□□□□ 0.1
TCOF1-206ENST00000445265 CDCA4Q9BXL8 241 aa15.66■□□□□ 0.1
TCOF1-206ENST00000445265 PLEKHA1Q9HB21 404 aa15.66■□□□□ 0.1
TCOF1-206ENST00000445265 UGT2A1Q9Y4X1 527 aa15.66■□□□□ 0.1
TCOF1-206ENST00000445265 FXYD6-FXYD2A0A087WZ82 144 aa15.66■□□□□ 0.1
TCOF1-206ENST00000445265 MAGEA2P43356 314 aa15.66■□□□□ 0.1
TCOF1-206ENST00000445265 INAVAQ3KP66 663 aa15.66■□□□□ 0.1
TCOF1-206ENST00000445265 C6orf132Q5T0Z8 1188 aa15.66■□□□□ 0.1
TCOF1-206ENST00000445265 PIP5KL1Q5T9C9 394 aa15.66■□□□□ 0.1
TCOF1-206ENST00000445265 ZNF619Q8N2I2 560 aa15.66■□□□□ 0.1
TCOF1-206ENST00000445265 FXYD6Q9H0Q3 95 aa15.66■□□□□ 0.1
TCOF1-206ENST00000445265 AKIP1Q9NQ31 210 aa15.66■□□□□ 0.1
TCOF1-206ENST00000445265 RLIMQ9NVW2 624 aa15.66■□□□□ 0.1
TCOF1-206ENST00000445265 TXNL4BQ9NX01 149 aaKnown RBP15.66■□□□□ 0.1
TCOF1-206ENST00000445265 OR6C2Q9NZP2 312 aa15.66■□□□□ 0.1
TCOF1-206ENST00000445265 NDRG2Q9UN36 371 aaKnown RBP15.66■□□□□ 0.1
TCOF1-206ENST00000445265 RBBP9O75884 186 aa15.65■□□□□ 0.1
TCOF1-206ENST00000445265 GPR19Q15760 415 aa15.65■□□□□ 0.1
TCOF1-206ENST00000445265 XAF1Q6GPH4 301 aa15.65■□□□□ 0.1
TCOF1-206ENST00000445265 ZNF852Q6ZMS4 543 aa15.65■□□□□ 0.1
TCOF1-206ENST00000445265 ZNF440Q8IYI8 595 aa15.65■□□□□ 0.1
TCOF1-206ENST00000445265 OR6N2Q8NGY6 317 aa15.65■□□□□ 0.1
TCOF1-206ENST00000445265 TBC1D20Q96BZ9 403 aa15.65■□□□□ 0.1
TCOF1-206ENST00000445265 BABAM2Q9NXR7 383 aa15.65■□□□□ 0.1
TCOF1-206ENST00000445265 VNN3Q9NY84 501 aa15.65■□□□□ 0.1
TCOF1-206ENST00000445265 TMEFF2Q9UIK5 374 aaPredicted RBP15.65■□□□□ 0.1
TCOF1-206ENST00000445265 TBC1D24Q9ULP9 559 aa15.65■□□□□ 0.1
TCOF1-206ENST00000445265 RNF144AP50876 292 aaPredicted RBP15.65■□□□□ 0.1
TCOF1-206ENST00000445265 REEP5Q00765 189 aa15.65■□□□□ 0.1
TCOF1-206ENST00000445265 ENTPD8Q5MY95 495 aa15.65■□□□□ 0.1
TCOF1-206ENST00000445265 C7orf57Q8NEG2 295 aa15.65■□□□□ 0.1
TCOF1-206ENST00000445265 SAMD11Q96NU1 681 aa15.65■□□□□ 0.1
TCOF1-206ENST00000445265 OR52D1Q9H346 318 aa15.65■□□□□ 0.1
TCOF1-206ENST00000445265 INPP5EQ9NRR6 644 aa15.65■□□□□ 0.1
TCOF1-206ENST00000445265 TEX10Q9NXF1 929 aaPredicted RBP15.65■□□□□ 0.1
TCOF1-206ENST00000445265 DNMT3BQ9UBC3 853 aaKnown RBP15.65■□□□□ 0.1
TCOF1-206ENST00000445265 METTL21EPA6NDL7 271 aa15.65■□□□□ 0.1
TCOF1-206ENST00000445265 FAM227AF5H4B4 570 aa15.65■□□□□ 0.1
TCOF1-206ENST00000445265 NDUFB2O95178 105 aa15.65■□□□□ 0.1
TCOF1-206ENST00000445265 NRG3P56975 720 aa15.65■□□□□ 0.1
TCOF1-206ENST00000445265 CTF1Q16619 201 aa15.65■□□□□ 0.1
TCOF1-206ENST00000445265 DUSP7Q16829 419 aa15.65■□□□□ 0.1
TCOF1-206ENST00000445265 BCL2L15Q5TBC7 163 aa15.65■□□□□ 0.1
TCOF1-206ENST00000445265 PPP2R2DQ66LE6 453 aa15.65■□□□□ 0.1
TCOF1-206ENST00000445265 MSRB3Q8IXL7 192 aa15.65■□□□□ 0.1
TCOF1-206ENST00000445265 OR4K13Q8NH42 304 aa15.65■□□□□ 0.1
TCOF1-206ENST00000445265 ZFYVE21Q9BQ24 234 aa15.65■□□□□ 0.1
TCOF1-206ENST00000445265 RBCK1Q9BYM8 510 aa15.65■□□□□ 0.1
TCOF1-206ENST00000445265 EXO5Q9H790 373 aa15.65■□□□□ 0.1
TCOF1-206ENST00000445265 MED16Q9Y2X0 877 aa15.65■□□□□ 0.1
TCOF1-206ENST00000445265 SNX11Q9Y5W9 270 aa15.65■□□□□ 0.1
TCOF1-206ENST00000445265 TEX13CA0A0J9YWL9 993 aa15.65■□□□□ 0.1
TCOF1-206ENST00000445265 WASH3PC4AMC7 463 aa15.65■□□□□ 0.1
TCOF1-206ENST00000445265 SYT5O00445 386 aa15.65■□□□□ 0.1
TCOF1-206ENST00000445265 HPGDSO60760 199 aa15.65■□□□□ 0.1
TCOF1-206ENST00000445265 CSO75390 466 aaKnown RBP15.65■□□□□ 0.1
TCOF1-206ENST00000445265 GP1BBP13224 206 aa15.65■□□□□ 0.1
TCOF1-206ENST00000445265 NTSR1P30989 418 aa15.65■□□□□ 0.1
TCOF1-206ENST00000445265 SHC2P98077 582 aa15.65■□□□□ 0.1
TCOF1-206ENST00000445265 LRRC26Q2I0M4 334 aa15.65■□□□□ 0.1
TCOF1-206ENST00000445265 Q6ZNB5 142 aa15.65■□□□□ 0.1
TCOF1-206ENST00000445265 DOK4Q8TEW6 326 aa15.65■□□□□ 0.1
TCOF1-206ENST00000445265 BCL7CQ8WUZ0 217 aaPredicted RBP15.65■□□□□ 0.1
TCOF1-206ENST00000445265 ZNF582Q96NG8 517 aaPredicted RBP15.65■□□□□ 0.1
TCOF1-206ENST00000445265 EGLN3Q9H6Z9 239 aa15.65■□□□□ 0.1
TCOF1-206ENST00000445265 NT5DC2Q9H857 520 aa15.65■□□□□ 0.1
TCOF1-206ENST00000445265 FZD3Q9NPG1 666 aa15.65■□□□□ 0.1
TCOF1-206ENST00000445265 LILRB3O75022 631 aa15.64■□□□□ 0.09
TCOF1-206ENST00000445265 KRT33AO76009 404 aa15.64■□□□□ 0.09
TCOF1-206ENST00000445265 KLF8O95600 359 aaPredicted RBP15.64■□□□□ 0.09
TCOF1-206ENST00000445265 PTGER1P34995 402 aa15.64■□□□□ 0.09
TCOF1-206ENST00000445265 HOXC5Q00444 222 aa15.64■□□□□ 0.09
TCOF1-206ENST00000445265 ANKRD54Q6NXT1 300 aa15.64■□□□□ 0.09
TCOF1-206ENST00000445265 VRK2Q86Y07 508 aa15.64■□□□□ 0.09
TCOF1-206ENST00000445265 ARRDC3Q96B67 414 aa15.64■□□□□ 0.09
TCOF1-206ENST00000445265 SNX18Q96RF0 628 aa15.64■□□□□ 0.09
TCOF1-206ENST00000445265 MACROD1Q9BQ69 325 aa15.64■□□□□ 0.09
TCOF1-206ENST00000445265 PELOQ9BRX2 385 aaKnown RBP15.64■□□□□ 0.09
TCOF1-206ENST00000445265 B3GNT4Q9C0J1 378 aa15.64■□□□□ 0.09
TCOF1-206ENST00000445265 ZBP1Q9H171 429 aa15.64■□□□□ 0.09
TCOF1-206ENST00000445265 FBRSQ9HAH7 460 aa15.64■□□□□ 0.09
TCOF1-206ENST00000445265 UBQLN2Q9UHD9 624 aa15.64■□□□□ 0.09
TCOF1-206ENST00000445265 MYO9BQ13459 2157 aa15.64■□□□□ 0.09
TCOF1-206ENST00000445265 A8MVJ9 347 aa15.64■□□□□ 0.09
TCOF1-206ENST00000445265 ZNF888P0CJ79 500 aaPredicted RBP15.64■□□□□ 0.09
TCOF1-206ENST00000445265 OCLNQ16625 522 aa15.64■□□□□ 0.09
TCOF1-206ENST00000445265 SLC29A4Q7RTT9 530 aa15.64■□□□□ 0.09
TCOF1-206ENST00000445265 LAS2Q8IYD9 372 aa15.64■□□□□ 0.09
TCOF1-206ENST00000445265 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.64■□□□□ 0.09
TCOF1-206ENST00000445265 RXFP3Q9NSD7 469 aa15.64■□□□□ 0.09
TCOF1-206ENST00000445265 MAU2Q9Y6X3 613 aa15.64■□□□□ 0.09
TCOF1-206ENST00000445265 AHSA1O95433 338 aa15.64■□□□□ 0.09
TCOF1-206ENST00000445265 UCHL1P09936 223 aa15.64■□□□□ 0.09
TCOF1-206ENST00000445265 RBM34P42696 430 aaKnown RBP15.64■□□□□ 0.09
TCOF1-206ENST00000445265 FAAH2Q6GMR7 532 aa15.64■□□□□ 0.09
TCOF1-206ENST00000445265 PLCZ1Q86YW0 608 aa15.64■□□□□ 0.09
TCOF1-206ENST00000445265 JAGN1Q8N5M9 183 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms