RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 SEC14L2O76054 403 aa17.64■□□□□ 0.41
SHANK3-203ENST00000445220 FGF18O76093 207 aa17.64■□□□□ 0.41
SHANK3-203ENST00000445220 GABARAPO95166 117 aa17.64■□□□□ 0.41
SHANK3-203ENST00000445220 DRD2P14416 443 aa17.64■□□□□ 0.41
SHANK3-203ENST00000445220 ZNF33BQ06732 778 aa17.64■□□□□ 0.41
SHANK3-203ENST00000445220 DHCR24Q15392 516 aa17.64■□□□□ 0.41
SHANK3-203ENST00000445220 TRIM46Q7Z4K8 759 aa17.64■□□□□ 0.41
SHANK3-203ENST00000445220 GIMAP1Q8WWP7 306 aa17.64■□□□□ 0.41
SHANK3-203ENST00000445220 MSLNLQ96KJ4 702 aa17.64■□□□□ 0.41
SHANK3-203ENST00000445220 NAALAD2Q9Y3Q0 740 aa17.64■□□□□ 0.41
SHANK3-203ENST00000445220 KLK4Q9Y5K2 254 aa17.64■□□□□ 0.41
SHANK3-203ENST00000445220 ZNF736B4DX44 427 aaPredicted RBP17.63■□□□□ 0.41
SHANK3-203ENST00000445220 GPR32O75388 356 aa17.63■□□□□ 0.41
SHANK3-203ENST00000445220 GNSP15586 552 aa17.63■□□□□ 0.41
SHANK3-203ENST00000445220 TMEM115Q12893 351 aaPredicted RBP17.63■□□□□ 0.41
SHANK3-203ENST00000445220 RASGRP3Q8IV61 690 aa17.63■□□□□ 0.41
SHANK3-203ENST00000445220 OR5T1Q8NG75 326 aa17.63■□□□□ 0.41
SHANK3-203ENST00000445220 OR2M4Q96R27 311 aa17.63■□□□□ 0.41
SHANK3-203ENST00000445220 G6PC3Q9BUM1 346 aa17.63■□□□□ 0.41
SHANK3-203ENST00000445220 KCNK12Q9HB15 430 aa17.63■□□□□ 0.41
SHANK3-203ENST00000445220 C1orf226A1L170 272 aa17.63■□□□□ 0.41
SHANK3-203ENST00000445220 C11orf98E9PRG8 122 aa17.63■□□□□ 0.41
SHANK3-203ENST00000445220 SYPP08247 313 aa17.63■□□□□ 0.41
SHANK3-203ENST00000445220 ZER1Q7Z7L7 766 aa17.63■□□□□ 0.41
SHANK3-203ENST00000445220 CCDC71Q8IV32 467 aaPredicted RBP17.63■□□□□ 0.41
SHANK3-203ENST00000445220 HUS1BQ8NHY5 278 aa17.63■□□□□ 0.41
SHANK3-203ENST00000445220 HAVCR2Q8TDQ0 301 aa17.63■□□□□ 0.41
SHANK3-203ENST00000445220 NINJ1Q92982 152 aa17.63■□□□□ 0.41
SHANK3-203ENST00000445220 LMF1Q96S06 567 aa17.63■□□□□ 0.41
SHANK3-203ENST00000445220 LSM5Q9Y4Y9 91 aaKnown RBP17.63■□□□□ 0.41
SHANK3-203ENST00000445220 WNT6Q9Y6F9 365 aa17.63■□□□□ 0.41
SHANK3-203ENST00000445220 SCN11AQ9UI33 1791 aa17.63■□□□□ 0.41
SHANK3-203ENST00000445220 A0A0D9SEW6 157 aa17.63■□□□□ 0.41
SHANK3-203ENST00000445220 TRAPPC2P0DI81 140 aa17.63■□□□□ 0.41
SHANK3-203ENST00000445220 TRAPPC2BP0DI82 140 aa17.63■□□□□ 0.41
SHANK3-203ENST00000445220 FOXA1P55317 472 aa17.63■□□□□ 0.41
SHANK3-203ENST00000445220 PITX1P78337 314 aaPredicted RBP17.63■□□□□ 0.41
SHANK3-203ENST00000445220 C2orf27AQ580R0 203 aa17.63■□□□□ 0.41
SHANK3-203ENST00000445220 LETMD1Q6P1Q0 360 aa17.63■□□□□ 0.41
SHANK3-203ENST00000445220 OR2T4Q8NH00 348 aa17.63■□□□□ 0.41
SHANK3-203ENST00000445220 GLYATL2Q8WU03 294 aa17.63■□□□□ 0.41
SHANK3-203ENST00000445220 BTNL2Q9UIR0 455 aa17.63■□□□□ 0.41
SHANK3-203ENST00000445220 FAM230AA0A1W2PPH8 454 aa17.63■□□□□ 0.41
SHANK3-203ENST00000445220 RAB19A4D1S5 217 aa17.63■□□□□ 0.41
SHANK3-203ENST00000445220 COCHO43405 550 aa17.63■□□□□ 0.41
SHANK3-203ENST00000445220 ARSBP15848 533 aa17.63■□□□□ 0.41
SHANK3-203ENST00000445220 SOX4Q06945 474 aaPredicted RBP17.63■□□□□ 0.41
SHANK3-203ENST00000445220 UNC5DQ6UXZ4 953 aa17.63■□□□□ 0.41
SHANK3-203ENST00000445220 SSX9Q7RTT3 188 aa17.63■□□□□ 0.41
SHANK3-203ENST00000445220 AK1P00568 194 aa17.62■□□□□ 0.41
SHANK3-203ENST00000445220 GABRA3P34903 492 aa17.62■□□□□ 0.41
SHANK3-203ENST00000445220 TEAD2Q15562 447 aa17.62■□□□□ 0.41
SHANK3-203ENST00000445220 OR4K13Q8NH42 304 aa17.62■□□□□ 0.41
SHANK3-203ENST00000445220 FRZBQ92765 325 aa17.62■□□□□ 0.41
SHANK3-203ENST00000445220 IL21RQ9HBE5 538 aa17.62■□□□□ 0.41
SHANK3-203ENST00000445220 FZD3Q9NPG1 666 aa17.62■□□□□ 0.41
SHANK3-203ENST00000445220 ABRACLQ9P1F3 81 aa17.62■□□□□ 0.41
SHANK3-203ENST00000445220 CIB4A0PJX0 185 aa17.62■□□□□ 0.41
SHANK3-203ENST00000445220 TOR1AO14656 332 aa17.62■□□□□ 0.41
SHANK3-203ENST00000445220 PEX14O75381 377 aa17.62■□□□□ 0.41
SHANK3-203ENST00000445220 JUNBP17275 347 aaPredicted RBP17.62■□□□□ 0.41
SHANK3-203ENST00000445220 RAB4BP61018 213 aa17.62■□□□□ 0.41
SHANK3-203ENST00000445220 WDR5P61964 334 aaKnown RBP17.62■□□□□ 0.41
SHANK3-203ENST00000445220 ACSM3Q53FZ2 586 aa17.62■□□□□ 0.41
SHANK3-203ENST00000445220 PDLIM7Q9NR12 457 aa17.62■□□□□ 0.41
SHANK3-203ENST00000445220 GSRP00390 522 aa17.62■□□□□ 0.41
SHANK3-203ENST00000445220 TNFP01375 233 aa17.62■□□□□ 0.41
SHANK3-203ENST00000445220 TRIM23P36406 574 aa17.62■□□□□ 0.41
SHANK3-203ENST00000445220 TDGQ13569 410 aa17.62■□□□□ 0.41
SHANK3-203ENST00000445220 SMN1Q16637 294 aaKnown RBP17.62■□□□□ 0.41
SHANK3-203ENST00000445220 TSTD1Q8NFU3 115 aa17.62■□□□□ 0.41
SHANK3-203ENST00000445220 OR56B2PQ8NGI1 322 aa17.62■□□□□ 0.41
SHANK3-203ENST00000445220 ZNF417Q8TAU3 575 aa17.62■□□□□ 0.41
SHANK3-203ENST00000445220 SAMD8Q96LT4 415 aa17.62■□□□□ 0.41
SHANK3-203ENST00000445220 PRRT1Q99946 306 aa17.62■□□□□ 0.41
SHANK3-203ENST00000445220 HRH4Q9H3N8 390 aa17.62■□□□□ 0.41
SHANK3-203ENST00000445220 ZNF223Q9UK11 482 aaPredicted RBP17.62■□□□□ 0.41
SHANK3-203ENST00000445220 NPC1O15118 1278 aa17.62■□□□□ 0.41
SHANK3-203ENST00000445220 SMIM18P0DKX4 95 aa17.62■□□□□ 0.41
SHANK3-203ENST00000445220 NFYAP23511 347 aaPredicted RBP17.62■□□□□ 0.41
SHANK3-203ENST00000445220 BCL2A1Q16548 175 aa17.62■□□□□ 0.41
SHANK3-203ENST00000445220 NHSL2Q5HYW2 709 aa17.62■□□□□ 0.41
SHANK3-203ENST00000445220 ZNF280BQ86YH2 543 aa17.62■□□□□ 0.41
SHANK3-203ENST00000445220 DNAJC22Q8N4W6 341 aa17.62■□□□□ 0.41
SHANK3-203ENST00000445220 GLYATL1Q969I3 302 aa17.62■□□□□ 0.41
SHANK3-203ENST00000445220 ZBTB8AQ96BR9 441 aa17.62■□□□□ 0.41
SHANK3-203ENST00000445220 FOXRED1Q96CU9 486 aaPredicted RBP17.62■□□□□ 0.41
SHANK3-203ENST00000445220 MICU1Q9BPX6 476 aa17.62■□□□□ 0.41
SHANK3-203ENST00000445220 ASB6Q9NWX5 421 aa17.62■□□□□ 0.41
SHANK3-203ENST00000445220 A3GALT2U3KPV4 340 aa17.62■□□□□ 0.41
SHANK3-203ENST00000445220 NKX3-2P78367 333 aa17.61■□□□□ 0.41
SHANK3-203ENST00000445220 ID2Q02363 134 aa17.61■□□□□ 0.41
SHANK3-203ENST00000445220 OXA1LQ15070 435 aa17.61■□□□□ 0.41
SHANK3-203ENST00000445220 LY6G5CQ5SRR4 150 aa17.61■□□□□ 0.41
SHANK3-203ENST00000445220 APIPQ96GX9 242 aa17.61■□□□□ 0.41
SHANK3-203ENST00000445220 GAAP10253 952 aa17.61■□□□□ 0.41
SHANK3-203ENST00000445220 SYNPRQ8TBG9 265 aa17.61■□□□□ 0.41
SHANK3-203ENST00000445220 SLC41A3Q96GZ6 507 aa17.61■□□□□ 0.41
SHANK3-203ENST00000445220 PCDHGA2Q9Y5H1 932 aa17.61■□□□□ 0.41
SHANK3-203ENST00000445220 B4GALT2O60909 372 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms