RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 PEX11AO75192 247 aa9.85□□□□□ -0.83
SF3A1-203ENST00000444440 SLITRK5O94991 958 aa9.85□□□□□ -0.83
SF3A1-203ENST00000444440 SNUPNO95149 360 aaKnown RBP9.85□□□□□ -0.83
SF3A1-203ENST00000444440 IL33O95760 270 aa9.85□□□□□ -0.83
SF3A1-203ENST00000444440 ACTL6AO96019 429 aa9.85□□□□□ -0.83
SF3A1-203ENST00000444440 CPN1P15169 458 aa9.85□□□□□ -0.83
SF3A1-203ENST00000444440 GABRA3P34903 492 aa9.85□□□□□ -0.83
SF3A1-203ENST00000444440 RFX3P48380 749 aa9.85□□□□□ -0.83
SF3A1-203ENST00000444440 TPD52P55327 224 aaPredicted RBP9.85□□□□□ -0.83
SF3A1-203ENST00000444440 CLDN15P56746 228 aa9.85□□□□□ -0.83
SF3A1-203ENST00000444440 MPP2Q14168 576 aa9.85□□□□□ -0.83
SF3A1-203ENST00000444440 PTGR1Q14914 329 aa9.85□□□□□ -0.83
SF3A1-203ENST00000444440 HSPB2Q16082 182 aa9.85□□□□□ -0.83
SF3A1-203ENST00000444440 SLC25A35Q3KQZ1 300 aa9.85□□□□□ -0.83
SF3A1-203ENST00000444440 GRAMD1BQ3KR37 738 aa9.85□□□□□ -0.83
SF3A1-203ENST00000444440 CYP27C1Q4G0S4 372 aa9.85□□□□□ -0.83
SF3A1-203ENST00000444440 TNFAIP8L3Q5GJ75 292 aa9.85□□□□□ -0.83
SF3A1-203ENST00000444440 BEND6Q5SZJ8 279 aaPredicted RBP9.85□□□□□ -0.83
SF3A1-203ENST00000444440 MARCH3Q86UD3 253 aa9.85□□□□□ -0.83
SF3A1-203ENST00000444440 IFNEQ86WN2 208 aa9.85□□□□□ -0.83
SF3A1-203ENST00000444440 PM20D2Q8IYS1 436 aa9.85□□□□□ -0.83
SF3A1-203ENST00000444440 KIRREL3Q8IZU9 778 aa9.85□□□□□ -0.83
SF3A1-203ENST00000444440 KRTCAP2Q8N6L1 136 aa9.85□□□□□ -0.83
SF3A1-203ENST00000444440 OR5M1Q8NGP8 315 aa9.85□□□□□ -0.83
SF3A1-203ENST00000444440 ZPLD1Q8TCW7 415 aa9.85□□□□□ -0.83
SF3A1-203ENST00000444440 PPCDCQ96CD2 204 aa9.85□□□□□ -0.83
SF3A1-203ENST00000444440 RMND5BQ96G75 393 aaPredicted RBP9.85□□□□□ -0.83
SF3A1-203ENST00000444440 C16orf58Q96GQ5 468 aa9.85□□□□□ -0.83
SF3A1-203ENST00000444440 NPAS1Q99742 590 aa9.85□□□□□ -0.83
SF3A1-203ENST00000444440 YIPF4Q9BSR8 244 aa9.85□□□□□ -0.83
SF3A1-203ENST00000444440 DSN1Q9H410 356 aa9.85□□□□□ -0.83
SF3A1-203ENST00000444440 SH3BP4Q9P0V3 963 aa9.85□□□□□ -0.83
SF3A1-203ENST00000444440 NTMQ9P121 344 aa9.85□□□□□ -0.83
SF3A1-203ENST00000444440 CLCF1Q9UBD9 225 aa9.85□□□□□ -0.83
SF3A1-203ENST00000444440 PRR14LQ5THK1 2151 aa9.85□□□□□ -0.83
SF3A1-203ENST00000444440 F8P00451 2351 aa9.85□□□□□ -0.83
SF3A1-203ENST00000444440 RAI1Q7Z5J4 1906 aaPredicted RBP9.84□□□□□ -0.83
SF3A1-203ENST00000444440 WDR91A4D1P6 747 aa9.84□□□□□ -0.83
SF3A1-203ENST00000444440 CLCA1A8K7I4 914 aa9.84□□□□□ -0.83
SF3A1-203ENST00000444440 SCAMP2O15127 329 aaKnown RBP9.84□□□□□ -0.83
SF3A1-203ENST00000444440 GMFGO60234 142 aa9.84□□□□□ -0.83
SF3A1-203ENST00000444440 NKX2-2O95096 273 aa9.84□□□□□ -0.83
SF3A1-203ENST00000444440 UTS2O95399 124 aa9.84□□□□□ -0.83
SF3A1-203ENST00000444440 IFI6P09912 130 aa9.84□□□□□ -0.83
SF3A1-203ENST00000444440 LAMP1P11279 417 aa9.84□□□□□ -0.83
SF3A1-203ENST00000444440 PRPS2P11908 318 aa9.84□□□□□ -0.83
SF3A1-203ENST00000444440 ZNF708P17019 499 aa9.84□□□□□ -0.83
SF3A1-203ENST00000444440 DDX5P17844 614 aaKnown RBP9.84□□□□□ -0.83
SF3A1-203ENST00000444440 DPP4P27487 766 aa9.84□□□□□ -0.83
SF3A1-203ENST00000444440 GPC1P35052 558 aa9.84□□□□□ -0.83
SF3A1-203ENST00000444440 KRT20P35900 424 aa9.84□□□□□ -0.83
SF3A1-203ENST00000444440 SERPINB4P48594 390 aa9.84□□□□□ -0.83
SF3A1-203ENST00000444440 PRKAG1P54619 331 aa9.84□□□□□ -0.83
SF3A1-203ENST00000444440 MRPS22P82650 360 aaKnown RBP9.84□□□□□ -0.83
SF3A1-203ENST00000444440 DUSP5Q16690 384 aa9.84□□□□□ -0.83
SF3A1-203ENST00000444440 C6orf136Q5SQH8 315 aa9.84□□□□□ -0.83
SF3A1-203ENST00000444440 HHATQ5VTY9 493 aa9.84□□□□□ -0.83
SF3A1-203ENST00000444440 ARSKQ6UWY0 536 aa9.84□□□□□ -0.83
SF3A1-203ENST00000444440 SLC16A11Q8NCK7 471 aa9.84□□□□□ -0.83
SF3A1-203ENST00000444440 NUP43Q8NFH3 380 aa9.84□□□□□ -0.83
SF3A1-203ENST00000444440 DUSP19Q8WTR2 217 aa9.84□□□□□ -0.83
SF3A1-203ENST00000444440 FAM120BQ96EK7 910 aaKnown RBP9.84□□□□□ -0.83
SF3A1-203ENST00000444440 CALHM2Q9HA72 323 aa9.84□□□□□ -0.83
SF3A1-203ENST00000444440 Q9N2J8 555 aa9.84□□□□□ -0.83
SF3A1-203ENST00000444440 PPP4R1LQ9P1A2 415 aa9.84□□□□□ -0.83
SF3A1-203ENST00000444440 ATP6V1HQ9UI12 483 aa9.84□□□□□ -0.83
SF3A1-203ENST00000444440 DKKL1Q9UK85 242 aa9.84□□□□□ -0.83
SF3A1-203ENST00000444440 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.84□□□□□ -0.83
SF3A1-203ENST00000444440 TMED5Q9Y3A6 229 aa9.84□□□□□ -0.83
SF3A1-203ENST00000444440 MRPS18CQ9Y3D5 142 aaKnown RBP9.84□□□□□ -0.83
SF3A1-203ENST00000444440 HIVEP1P15822 2718 aa9.84□□□□□ -0.83
SF3A1-203ENST00000444440 PRRC2AP48634 2157 aaKnown RBP9.84□□□□□ -0.83
SF3A1-203ENST00000444440 ABCA4P78363 2273 aa9.84□□□□□ -0.83
SF3A1-203ENST00000444440 TMEM114B3SHH9 223 aa9.83□□□□□ -0.84
SF3A1-203ENST00000444440 H0Y3Z8 333 aa9.83□□□□□ -0.84
SF3A1-203ENST00000444440 DVL2O14641 736 aa9.83□□□□□ -0.84
SF3A1-203ENST00000444440 HSPA4LO95757 839 aa9.83□□□□□ -0.84
SF3A1-203ENST00000444440 TGM6O95932 706 aa9.83□□□□□ -0.84
SF3A1-203ENST00000444440 IL2RAP01589 272 aa9.83□□□□□ -0.84
SF3A1-203ENST00000444440 SERPINE1P05121 402 aa9.83□□□□□ -0.84
SF3A1-203ENST00000444440 DHRS4L1P0CG22 281 aa9.83□□□□□ -0.84
SF3A1-203ENST00000444440 MAPK1P28482 360 aa9.83□□□□□ -0.84
SF3A1-203ENST00000444440 UQCRC1P31930 480 aa9.83□□□□□ -0.84
SF3A1-203ENST00000444440 ASCL1P50553 236 aa9.83□□□□□ -0.84
SF3A1-203ENST00000444440 SUCLG1P53597 346 aaKnown RBP9.83□□□□□ -0.84
SF3A1-203ENST00000444440 MANFP55145 182 aaKnown RBP9.83□□□□□ -0.84
SF3A1-203ENST00000444440 DSCR4P56555 118 aaPredicted RBP9.83□□□□□ -0.84
SF3A1-203ENST00000444440 PSPHP78330 225 aa9.83□□□□□ -0.84
SF3A1-203ENST00000444440 MYBPHQ13203 477 aa9.83□□□□□ -0.84
SF3A1-203ENST00000444440 TESK1Q15569 626 aa9.83□□□□□ -0.84
SF3A1-203ENST00000444440 DECR1Q16698 335 aa9.83□□□□□ -0.84
SF3A1-203ENST00000444440 FBXL19-AS1Q494R0 122 aa9.83□□□□□ -0.84
SF3A1-203ENST00000444440 CCNJQ5T5M9 372 aa9.83□□□□□ -0.84
SF3A1-203ENST00000444440 IL23RQ5VWK5 629 aa9.83□□□□□ -0.84
SF3A1-203ENST00000444440 MFSD12Q6NUT3 480 aa9.83□□□□□ -0.84
SF3A1-203ENST00000444440 FIGNL1Q6PIW4 674 aa9.83□□□□□ -0.84
SF3A1-203ENST00000444440 SZRD1Q7Z422 152 aa9.83□□□□□ -0.84
SF3A1-203ENST00000444440 CDH24Q86UP0 819 aa9.83□□□□□ -0.84
SF3A1-203ENST00000444440 RIMKLAQ8IXN7 391 aa9.83□□□□□ -0.84
SF3A1-203ENST00000444440 ZZZ3Q8IYH5 903 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms