RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 SLC35A3Q9Y2D2 325 aa5.6□□□□□ -1.51
VPS50-205ENST00000441602 COMMD3-BMI1R4GMX3 469 aa5.6□□□□□ -1.51
VPS50-205ENST00000441602 TRBV4-1A0A0J9YWV2 114 aa5.6□□□□□ -1.51
VPS50-205ENST00000441602 HTR3EA5X5Y0 456 aa5.6□□□□□ -1.51
VPS50-205ENST00000441602 TRIM64A6NGJ6 449 aa5.6□□□□□ -1.51
VPS50-205ENST00000441602 CPSF4LA6NMK7 179 aaKnown RBP5.6□□□□□ -1.51
VPS50-205ENST00000441602 CT62P0C5K7 136 aa5.6□□□□□ -1.51
VPS50-205ENST00000441602 CKMT1AP12532 417 aa5.6□□□□□ -1.51
VPS50-205ENST00000441602 FOLR1P15328 257 aa5.6□□□□□ -1.51
VPS50-205ENST00000441602 JUNBP17275 347 aaPredicted RBP5.6□□□□□ -1.51
VPS50-205ENST00000441602 RPS4Y1P22090 263 aaKnown RBP5.6□□□□□ -1.51
VPS50-205ENST00000441602 ELK4P28324 431 aa5.6□□□□□ -1.51
VPS50-205ENST00000441602 PIGAP37287 484 aa5.6□□□□□ -1.51
VPS50-205ENST00000441602 SMSP52788 366 aa5.6□□□□□ -1.51
VPS50-205ENST00000441602 CDH15P55291 814 aa5.6□□□□□ -1.51
VPS50-205ENST00000441602 PIN1Q13526 163 aaPredicted RBP5.6□□□□□ -1.51
VPS50-205ENST00000441602 RPL13AP3Q6NVV1 102 aa5.6□□□□□ -1.51
VPS50-205ENST00000441602 ZC3H14Q6PJT7 736 aaKnown RBP5.6□□□□□ -1.51
VPS50-205ENST00000441602 ISLR2Q6UXK2 745 aa5.6□□□□□ -1.51
VPS50-205ENST00000441602 CD300LDQ6UXZ3 194 aa5.6□□□□□ -1.51
VPS50-205ENST00000441602 KCTD8Q6ZWB6 473 aa5.6□□□□□ -1.51
VPS50-205ENST00000441602 SATL1Q86VE3 508 aa5.6□□□□□ -1.51
VPS50-205ENST00000441602 PPP1R3BQ86XI6 285 aa5.6□□□□□ -1.51
VPS50-205ENST00000441602 RNF113BQ8IZP6 322 aaKnown RBP5.6□□□□□ -1.51
VPS50-205ENST00000441602 STX19Q8N4C7 294 aa5.6□□□□□ -1.51
VPS50-205ENST00000441602 MORN4Q8NDC4 146 aa5.6□□□□□ -1.51
VPS50-205ENST00000441602 AGBL5Q8NDL9 886 aa5.6□□□□□ -1.51
VPS50-205ENST00000441602 ZNF540Q8NDQ6 660 aa5.6□□□□□ -1.51
VPS50-205ENST00000441602 ADAMTS16Q8TE57 1224 aa5.6□□□□□ -1.51
VPS50-205ENST00000441602 PIK3R3Q92569 461 aa5.6□□□□□ -1.51
VPS50-205ENST00000441602 RORBQ92753 470 aa5.6□□□□□ -1.51
VPS50-205ENST00000441602 HOXB13Q92826 284 aaPredicted RBP5.6□□□□□ -1.51
VPS50-205ENST00000441602 MPP4Q96JB8 637 aa5.6□□□□□ -1.51
VPS50-205ENST00000441602 CCDC74BQ96LY2 380 aa5.6□□□□□ -1.51
VPS50-205ENST00000441602 ANKRA2Q9H9E1 313 aa5.6□□□□□ -1.51
VPS50-205ENST00000441602 TMEM9Q9P0T7 183 aa5.6□□□□□ -1.51
VPS50-205ENST00000441602 RSL24D1Q9UHA3 163 aaKnown RBP5.6□□□□□ -1.51
VPS50-205ENST00000441602 NXT1Q9UKK6 140 aaKnown RBP5.6□□□□□ -1.51
VPS50-205ENST00000441602 SNRNP200O75643 2136 aaKnown RBP5.6□□□□□ -1.51
VPS50-205ENST00000441602 KCNK2O95069 426 aa5.6□□□□□ -1.51
VPS50-205ENST00000441602 HMGN1P05114 100 aa5.6□□□□□ -1.51
VPS50-205ENST00000441602 HEXBP07686 556 aa5.6□□□□□ -1.51
VPS50-205ENST00000441602 CD63P08962 238 aa5.6□□□□□ -1.51
VPS50-205ENST00000441602 MAOAP21397 527 aa5.6□□□□□ -1.51
VPS50-205ENST00000441602 PPICP45877 212 aa5.6□□□□□ -1.51
VPS50-205ENST00000441602 BTG2P78543 158 aa5.6□□□□□ -1.51
VPS50-205ENST00000441602 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.6□□□□□ -1.51
VPS50-205ENST00000441602 ERV3-1Q14264 604 aa5.6□□□□□ -1.51
VPS50-205ENST00000441602 SYT16Q17RD7 645 aa5.6□□□□□ -1.51
VPS50-205ENST00000441602 ENTPD8Q5MY95 495 aa5.6□□□□□ -1.51
VPS50-205ENST00000441602 MEDAGQ5VYS4 303 aa5.6□□□□□ -1.51
VPS50-205ENST00000441602 SLX4IPQ5VYV7 408 aa5.6□□□□□ -1.51
VPS50-205ENST00000441602 PGBD2Q6P3X8 592 aa5.6□□□□□ -1.51
VPS50-205ENST00000441602 ZNF613Q6PF04 617 aa5.6□□□□□ -1.51
VPS50-205ENST00000441602 B3GNT6Q6ZMB0 384 aa5.6□□□□□ -1.51
VPS50-205ENST00000441602 WDR53Q7Z5U6 358 aaPredicted RBP5.6□□□□□ -1.51
VPS50-205ENST00000441602 PLPP5Q8NEB5 264 aa5.6□□□□□ -1.51
VPS50-205ENST00000441602 OR52L1Q8NGH7 329 aa5.6□□□□□ -1.51
VPS50-205ENST00000441602 FBLIM1Q8WUP2 373 aa5.6□□□□□ -1.51
VPS50-205ENST00000441602 OSTF1Q92882 214 aa5.6□□□□□ -1.51
VPS50-205ENST00000441602 OR8D2Q9GZM6 311 aa5.6□□□□□ -1.51
VPS50-205ENST00000441602 NECTIN3Q9NQS3 549 aa5.6□□□□□ -1.51
VPS50-205ENST00000441602 PLCXD1Q9NUJ7 323 aa5.6□□□□□ -1.51
VPS50-205ENST00000441602 DHCR7Q9UBM7 475 aaKnown RBP5.6□□□□□ -1.51
VPS50-205ENST00000441602 FTSJ1Q9UET6 329 aa5.6□□□□□ -1.51
VPS50-205ENST00000441602 TMEM131Q92545 1883 aa5.59□□□□□ -1.51
VPS50-205ENST00000441602 CHD9Q3L8U1 2897 aa5.59□□□□□ -1.51
VPS50-205ENST00000441602 CEP192Q8TEP8 1941 aa5.59□□□□□ -1.51
VPS50-205ENST00000441602 GXYLT2A0PJZ3 443 aa5.59□□□□□ -1.51
VPS50-205ENST00000441602 PRAMEF25A6NGN4 478 aa5.59□□□□□ -1.51
VPS50-205ENST00000441602 EFCAB7A8K855 629 aa5.59□□□□□ -1.51
VPS50-205ENST00000441602 C9J4A7 227 aa5.59□□□□□ -1.51
VPS50-205ENST00000441602 PTGES3LE9PB15 166 aa5.59□□□□□ -1.51
VPS50-205ENST00000441602 ZNF701M0R085 212 aaPredicted RBP5.59□□□□□ -1.51
VPS50-205ENST00000441602 SCDO00767 359 aa5.59□□□□□ -1.51
VPS50-205ENST00000441602 FLRT2O43155 660 aa5.59□□□□□ -1.51
VPS50-205ENST00000441602 FCMRO60667 390 aa5.59□□□□□ -1.51
VPS50-205ENST00000441602 CNOT3O75175 753 aaKnown RBP5.59□□□□□ -1.51
VPS50-205ENST00000441602 SCRG1O75711 98 aa5.59□□□□□ -1.51
VPS50-205ENST00000441602 SP9P0CG40 484 aa5.59□□□□□ -1.51
VPS50-205ENST00000441602 ATXN8OSP0DMR3 200 aa5.59□□□□□ -1.51
VPS50-205ENST00000441602 POU2F1P14859 743 aa5.59□□□□□ -1.51
VPS50-205ENST00000441602 IL12BP29460 328 aa5.59□□□□□ -1.51
VPS50-205ENST00000441602 SSTR4P31391 388 aa5.59□□□□□ -1.51
VPS50-205ENST00000441602 MAP3K8P41279 467 aa5.59□□□□□ -1.51
VPS50-205ENST00000441602 EMDP50402 254 aa5.59□□□□□ -1.51
VPS50-205ENST00000441602 EEF1A1P68104 462 aaKnown RBP5.59□□□□□ -1.51
VPS50-205ENST00000441602 DCDP81605 110 aaKnown RBP5.59□□□□□ -1.51
VPS50-205ENST00000441602 TSPAN31Q12999 210 aa5.59□□□□□ -1.51
VPS50-205ENST00000441602 NSDHLQ15738 373 aa5.59□□□□□ -1.51
VPS50-205ENST00000441602 NEDD8Q15843 81 aa5.59□□□□□ -1.51
VPS50-205ENST00000441602 ZNF141Q15928 474 aa5.59□□□□□ -1.51
VPS50-205ENST00000441602 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.59□□□□□ -1.51
VPS50-205ENST00000441602 PERM1Q5SV97 790 aa5.59□□□□□ -1.51
VPS50-205ENST00000441602 CCNJQ5T5M9 372 aa5.59□□□□□ -1.51
VPS50-205ENST00000441602 MRPL2Q5T653 305 aaKnown RBP5.59□□□□□ -1.51
VPS50-205ENST00000441602 C1orf189Q5VU69 101 aa5.59□□□□□ -1.51
VPS50-205ENST00000441602 ANKRD34AQ69YU3 496 aa5.59□□□□□ -1.51
VPS50-205ENST00000441602 ARHGAP22Q7Z5H3 698 aa5.59□□□□□ -1.51
VPS50-205ENST00000441602 ABCA7Q8IZY2 2146 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms