RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 HIST1H2ADP20671 130 aa15.77■□□□□ 0.11
PMS1-213ENST00000441310 ACSL1P33121 698 aa15.77■□□□□ 0.11
PMS1-213ENST00000441310 OPRD1P41143 372 aa15.77■□□□□ 0.11
PMS1-213ENST00000441310 ZXDCQ2QGD7 858 aaPredicted RBP15.77■□□□□ 0.11
PMS1-213ENST00000441310 ZNF791Q3KP31 576 aaPredicted RBP15.77■□□□□ 0.11
PMS1-213ENST00000441310 HIST2H2AA3Q6FI13 130 aa15.77■□□□□ 0.11
PMS1-213ENST00000441310 CD200R1LQ6Q8B3 271 aa15.77■□□□□ 0.11
PMS1-213ENST00000441310 FGD2Q7Z6J4 655 aa15.77■□□□□ 0.11
PMS1-213ENST00000441310 MEX3DQ86XN8 651 aaKnown RBP15.77■□□□□ 0.11
PMS1-213ENST00000441310 WDR20Q8TBZ3 569 aa15.77■□□□□ 0.11
PMS1-213ENST00000441310 UBTD2Q8WUN7 234 aa15.77■□□□□ 0.11
PMS1-213ENST00000441310 MRPS24Q96EL2 167 aaKnown RBP15.77■□□□□ 0.11
PMS1-213ENST00000441310 WDR89Q96FK6 387 aaPredicted RBP15.77■□□□□ 0.11
PMS1-213ENST00000441310 HIST1H2AHQ96KK5 128 aa15.77■□□□□ 0.11
PMS1-213ENST00000441310 FCRL1Q96LA6 429 aa15.77■□□□□ 0.11
PMS1-213ENST00000441310 HIST1H2AJQ99878 128 aa15.77■□□□□ 0.11
PMS1-213ENST00000441310 MRPL15Q9P015 296 aaKnown RBP15.77■□□□□ 0.11
PMS1-213ENST00000441310 SLC22A14Q9Y267 594 aa15.77■□□□□ 0.11
PMS1-213ENST00000441310 PCDHB1Q9Y5F3 818 aa15.77■□□□□ 0.11
PMS1-213ENST00000441310 WNT6Q9Y6F9 365 aa15.77■□□□□ 0.11
PMS1-213ENST00000441310 LIMS3P0CW19 117 aa15.76■□□□□ 0.11
PMS1-213ENST00000441310 LIMS4P0CW20 117 aa15.76■□□□□ 0.11
PMS1-213ENST00000441310 HBA1P69905 142 aa15.76■□□□□ 0.11
PMS1-213ENST00000441310 SLC7A9P82251 487 aa15.76■□□□□ 0.11
PMS1-213ENST00000441310 LRRC28Q86X40 367 aaPredicted RBP15.76■□□□□ 0.11
PMS1-213ENST00000441310 FAM170BA6NMN3 283 aa15.76■□□□□ 0.11
PMS1-213ENST00000441310 PRR23D1E9PI22 279 aaPredicted RBP15.76■□□□□ 0.11
PMS1-213ENST00000441310 RECKO95980 971 aa15.76■□□□□ 0.11
PMS1-213ENST00000441310 PRR23D2P0DMB1 279 aaPredicted RBP15.76■□□□□ 0.11
PMS1-213ENST00000441310 DGCR2P98153 550 aa15.76■□□□□ 0.11
PMS1-213ENST00000441310 PUM1Q14671 1186 aaKnown RBP eCLIP15.76■□□□□ 0.11
PMS1-213ENST00000441310 SFRP4Q6FHJ7 346 aaPredicted RBP15.76■□□□□ 0.11
PMS1-213ENST00000441310 TRMT11Q7Z4G4 463 aaKnown RBP15.76■□□□□ 0.11
PMS1-213ENST00000441310 ARHGAP9Q9BRR9 750 aa15.76■□□□□ 0.11
PMS1-213ENST00000441310 PTGFRNQ9P2B2 879 aa15.76■□□□□ 0.11
PMS1-213ENST00000441310 MGAT4CQ9UBM8 478 aa15.76■□□□□ 0.11
PMS1-213ENST00000441310 ING1Q9UK53 422 aaPredicted RBP15.76■□□□□ 0.11
PMS1-213ENST00000441310 TMEM129A0AVI4 362 aa15.75■□□□□ 0.11
PMS1-213ENST00000441310 MID1O15344 667 aa15.75■□□□□ 0.11
PMS1-213ENST00000441310 LATS1O95835 1130 aa15.75■□□□□ 0.11
PMS1-213ENST00000441310 SIM1P81133 766 aaPredicted RBP15.75■□□□□ 0.11
PMS1-213ENST00000441310 CHIT1Q13231 466 aa15.75■□□□□ 0.11
PMS1-213ENST00000441310 RPS26P11Q5JNZ5 115 aaPredicted RBP15.75■□□□□ 0.11
PMS1-213ENST00000441310 FAM26EQ8N5C1 309 aa15.75■□□□□ 0.11
PMS1-213ENST00000441310 ARIH2OSQ8N7S6 290 aa15.75■□□□□ 0.11
PMS1-213ENST00000441310 ZDHHC1Q8WTX9 485 aa15.75■□□□□ 0.11
PMS1-213ENST00000441310 NARS2Q96I59 477 aaKnown RBP15.75■□□□□ 0.11
PMS1-213ENST00000441310 ART5Q96L15 291 aa15.75■□□□□ 0.11
PMS1-213ENST00000441310 ATG10Q9H0Y0 220 aa15.75■□□□□ 0.11
PMS1-213ENST00000441310 MED9Q9NWA0 146 aa15.75■□□□□ 0.11
PMS1-213ENST00000441310 C6orf47O95873 294 aa15.75■□□□□ 0.11
PMS1-213ENST00000441310 ANKRD34CP0C6C1 535 aa15.75■□□□□ 0.11
PMS1-213ENST00000441310 ELAVL4P26378 380 aaKnown RBP15.75■□□□□ 0.11
PMS1-213ENST00000441310 CTNNB1P35222 781 aa15.75■□□□□ 0.11
PMS1-213ENST00000441310 SNRPD1P62314 119 aaKnown RBP15.75■□□□□ 0.11
PMS1-213ENST00000441310 LY6G5CQ5SRR4 150 aa15.75■□□□□ 0.11
PMS1-213ENST00000441310 TMEM88Q6PEY1 159 aa15.75■□□□□ 0.11
PMS1-213ENST00000441310 RBM45Q8IUH3 476 aaKnown RBP15.75■□□□□ 0.11
PMS1-213ENST00000441310 SCAMP4Q969E2 229 aa15.75■□□□□ 0.11
PMS1-213ENST00000441310 SUV39H2Q9H5I1 410 aa15.75■□□□□ 0.11
PMS1-213ENST00000441310 ZNF282Q9UDV7 671 aaPredicted RBP15.75■□□□□ 0.11
PMS1-213ENST00000441310 NDOR1Q9UHB4 597 aa15.75■□□□□ 0.11
PMS1-213ENST00000441310 RASD1Q9Y272 281 aa15.75■□□□□ 0.11
PMS1-213ENST00000441310 CHST2Q9Y4C5 530 aa15.75■□□□□ 0.11
PMS1-213ENST00000441310 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.75■□□□□ 0.11
PMS1-213ENST00000441310 PRMT3O60678 531 aa15.75■□□□□ 0.11
PMS1-213ENST00000441310 SRPRAP08240 638 aaKnown RBP15.75■□□□□ 0.11
PMS1-213ENST00000441310 ANXA4P09525 319 aaPredicted RBP15.75■□□□□ 0.11
PMS1-213ENST00000441310 PEPDP12955 493 aa15.75■□□□□ 0.11
PMS1-213ENST00000441310 SOAT1P35610 550 aa15.75■□□□□ 0.11
PMS1-213ENST00000441310 CAPZA2P47755 286 aa15.75■□□□□ 0.11
PMS1-213ENST00000441310 TAP2Q03519 686 aa15.75■□□□□ 0.11
PMS1-213ENST00000441310 MELKQ14680 651 aa15.75■□□□□ 0.11
PMS1-213ENST00000441310 PABPC1L2AQ5JQF8 200 aa15.75■□□□□ 0.11
PMS1-213ENST00000441310 C22orf39Q6P5X5 142 aa15.75■□□□□ 0.11
PMS1-213ENST00000441310 OR5T2Q8NGG2 359 aa15.75■□□□□ 0.11
PMS1-213ENST00000441310 OR4D10Q8NGI6 311 aa15.75■□□□□ 0.11
PMS1-213ENST00000441310 SCARB1Q8WTV0 552 aa15.75■□□□□ 0.11
PMS1-213ENST00000441310 VPS29Q9UBQ0 182 aa15.75■□□□□ 0.11
PMS1-213ENST00000441310 BTNL2Q9UIR0 455 aa15.75■□□□□ 0.11
PMS1-213ENST00000441310 GNG14A0A1W2PPG7 69 aa15.74■□□□□ 0.11
PMS1-213ENST00000441310 MGAT4DA6NG13 374 aa15.74■□□□□ 0.11
PMS1-213ENST00000441310 ARPC5O15511 151 aa15.74■□□□□ 0.11
PMS1-213ENST00000441310 SOX30O94993 753 aa15.74■□□□□ 0.11
PMS1-213ENST00000441310 RAB3BP20337 219 aa15.74■□□□□ 0.11
PMS1-213ENST00000441310 NFYAP23511 347 aaPredicted RBP15.74■□□□□ 0.11
PMS1-213ENST00000441310 PRPH2P23942 346 aa15.74■□□□□ 0.11
PMS1-213ENST00000441310 HLXQ14774 488 aaPredicted RBP15.74■□□□□ 0.11
PMS1-213ENST00000441310 CDKN3Q16667 212 aa15.74■□□□□ 0.11
PMS1-213ENST00000441310 ZNF385BQ569K4 471 aa15.74■□□□□ 0.11
PMS1-213ENST00000441310 ADNP2Q6IQ32 1131 aa15.74■□□□□ 0.11
PMS1-213ENST00000441310 PGBD2Q6P3X8 592 aa15.74■□□□□ 0.11
PMS1-213ENST00000441310 HSD17B13Q7Z5P4 300 aaPredicted RBP15.74■□□□□ 0.11
PMS1-213ENST00000441310 TECPR1Q7Z6L1 1165 aa15.74■□□□□ 0.11
PMS1-213ENST00000441310 OAFQ86UD1 273 aa15.74■□□□□ 0.11
PMS1-213ENST00000441310 PDZD9Q8IXQ8 264 aa15.74■□□□□ 0.11
PMS1-213ENST00000441310 NANPQ8TBE9 248 aa15.74■□□□□ 0.11
PMS1-213ENST00000441310 RPS6KB2Q9UBS0 482 aa15.74■□□□□ 0.11
PMS1-213ENST00000441310 PURGQ9UJV8 347 aaKnown RBP15.74■□□□□ 0.11
PMS1-213ENST00000441310 NOTCH4Q99466 2003 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms