RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 LTB4R2Q9NPC1 389 aa3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 SPHK2Q9NRA0 654 aa3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 AGPAT4Q9NRZ5 378 aa3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 PNPLA3Q9NST1 481 aa3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 DNAJC11Q9NVH1 559 aa3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 C1orf109Q9NX04 203 aa3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 ARL15Q9NXU5 204 aa3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 WSB2Q9NYS7 404 aaPredicted RBP3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 ANAPC2Q9UJX6 822 aa3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 PADI1Q9ULC6 663 aa3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 SNX6Q9UNH7 406 aa3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 PDE10AQ9Y233 779 aa3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 CCL26Q9Y258 94 aa3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 DTX4Q9Y2E6 619 aa3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 CCL27Q9Y4X3 112 aa3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 POLR3HQ9Y535 204 aaPredicted RBP3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 PCDHGB5Q9Y5G0 923 aa3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 CLDN16Q9Y5I7 305 aa3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 COL4A6Q14031 1691 aa3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 MYO18AQ92614 2054 aaKnown RBP3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 MYLKQ15746 1914 aa3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 DOCK4Q8N1I0 1966 aa3.22□□□□□ -1.89
HMGB3P11-201ENST00000440127 KCNE1BA0A087WTH5 132 aa3.22□□□□□ -1.89
HMGB3P11-201ENST00000440127 ARHGAP10A1A4S6 786 aa3.22□□□□□ -1.89
HMGB3P11-201ENST00000440127 ELOVL7A1L3X0 281 aa3.22□□□□□ -1.89
HMGB3P11-201ENST00000440127 FAM149AA5PLN7 773 aa3.22□□□□□ -1.89
HMGB3P11-201ENST00000440127 OR6C68A6NDL8 312 aa3.22□□□□□ -1.89
HMGB3P11-201ENST00000440127 CXorf65A6NEN9 183 aa3.22□□□□□ -1.89
HMGB3P11-201ENST00000440127 CBY3A6NI87 242 aa3.22□□□□□ -1.89
HMGB3P11-201ENST00000440127 HIDE1A8MVS5 230 aa3.22□□□□□ -1.89
HMGB3P11-201ENST00000440127 MS4A18H0YCH9 400 aa3.22□□□□□ -1.89
HMGB3P11-201ENST00000440127 H3BNH8 94 aa3.22□□□□□ -1.89
HMGB3P11-201ENST00000440127 GFYI3L273 518 aa3.22□□□□□ -1.89
HMGB3P11-201ENST00000440127 ZNF197O14709 1029 aa3.22□□□□□ -1.89
HMGB3P11-201ENST00000440127 CLGNO14967 610 aa3.22□□□□□ -1.89
HMGB3P11-201ENST00000440127 INPP4BO15327 924 aa3.22□□□□□ -1.89
HMGB3P11-201ENST00000440127 CLOCKO15516 846 aa3.22□□□□□ -1.89
HMGB3P11-201ENST00000440127 TPST1O60507 370 aa3.22□□□□□ -1.89
HMGB3P11-201ENST00000440127 RFPL2O75678 378 aa3.22□□□□□ -1.89
HMGB3P11-201ENST00000440127 RSL1D1O76021 490 aaKnown RBP3.22□□□□□ -1.89
HMGB3P11-201ENST00000440127 NEURL1O76050 574 aa3.22□□□□□ -1.89
HMGB3P11-201ENST00000440127 MYO1DO94832 1006 aa3.22□□□□□ -1.89
HMGB3P11-201ENST00000440127 SCELO95171 688 aa3.22□□□□□ -1.89
HMGB3P11-201ENST00000440127 H6PDO95479 791 aa3.22□□□□□ -1.89
HMGB3P11-201ENST00000440127 LDLRP01130 860 aa3.22□□□□□ -1.89
HMGB3P11-201ENST00000440127 PDYNP01213 254 aa3.22□□□□□ -1.89
HMGB3P11-201ENST00000440127 RB1P06400 928 aa3.22□□□□□ -1.89
HMGB3P11-201ENST00000440127 SRPRAP08240 638 aaKnown RBP3.22□□□□□ -1.89
HMGB3P11-201ENST00000440127 QDPRP09417 244 aa3.22□□□□□ -1.89
HMGB3P11-201ENST00000440127 CISD3P0C7P0 127 aa3.22□□□□□ -1.89
HMGB3P11-201ENST00000440127 NCK1P16333 377 aa3.22□□□□□ -1.89
HMGB3P11-201ENST00000440127 EPORP19235 508 aa3.22□□□□□ -1.89
HMGB3P11-201ENST00000440127 GGT1P19440 569 aa3.22□□□□□ -1.89
HMGB3P11-201ENST00000440127 EDN2P20800 178 aa3.22□□□□□ -1.89
HMGB3P11-201ENST00000440127 MYF6P23409 242 aa3.22□□□□□ -1.89
HMGB3P11-201ENST00000440127 HRH2P25021 359 aa3.22□□□□□ -1.89
HMGB3P11-201ENST00000440127 HOXA9P31269 272 aa3.22□□□□□ -1.89
HMGB3P11-201ENST00000440127 CTNNB1P35222 781 aa3.22□□□□□ -1.89
HMGB3P11-201ENST00000440127 PEX19P40855 299 aa3.22□□□□□ -1.89
HMGB3P11-201ENST00000440127 SLC15A1P46059 708 aa3.22□□□□□ -1.89
HMGB3P11-201ENST00000440127 NRIP1P48552 1158 aa3.22□□□□□ -1.89
HMGB3P11-201ENST00000440127 ART1P52961 327 aa3.22□□□□□ -1.89
HMGB3P11-201ENST00000440127 SH3BGRP55822 239 aaPredicted RBP3.22□□□□□ -1.89
HMGB3P11-201ENST00000440127 AP1S2P56377 157 aa3.22□□□□□ -1.89
HMGB3P11-201ENST00000440127 CLDN8P56748 225 aa3.22□□□□□ -1.89
HMGB3P11-201ENST00000440127 OR4D2P58180 307 aa3.22□□□□□ -1.89
HMGB3P11-201ENST00000440127 MTPNP58546 118 aa3.22□□□□□ -1.89
HMGB3P11-201ENST00000440127 DCDC1P59894 354 aa3.22□□□□□ -1.89
HMGB3P11-201ENST00000440127 ST8SIA6P61647 398 aa3.22□□□□□ -1.89
HMGB3P11-201ENST00000440127 RPS14P62263 151 aaKnown RBP3.22□□□□□ -1.89
HMGB3P11-201ENST00000440127 RPL36AP83881 106 aaKnown RBP3.22□□□□□ -1.89
HMGB3P11-201ENST00000440127 HMGCS1Q01581 520 aa3.22□□□□□ -1.89
HMGB3P11-201ENST00000440127 POU3F1Q03052 451 aaPredicted RBP3.22□□□□□ -1.89
HMGB3P11-201ENST00000440127 CHRNB3Q05901 458 aa3.22□□□□□ -1.89
HMGB3P11-201ENST00000440127 ZNF33BQ06732 778 aa3.22□□□□□ -1.89
HMGB3P11-201ENST00000440127 CRYZQ08257 329 aaKnown RBP3.22□□□□□ -1.89
HMGB3P11-201ENST00000440127 HYAL1Q12794 435 aa3.22□□□□□ -1.89
HMGB3P11-201ENST00000440127 MERTKQ12866 999 aa3.22□□□□□ -1.89
HMGB3P11-201ENST00000440127 ABRQ12979 859 aa3.22□□□□□ -1.89
HMGB3P11-201ENST00000440127 CHIT1Q13231 466 aa3.22□□□□□ -1.89
HMGB3P11-201ENST00000440127 SELPLGQ14242 412 aa3.22□□□□□ -1.89
HMGB3P11-201ENST00000440127 GK3PQ14409 553 aa3.22□□□□□ -1.89
HMGB3P11-201ENST00000440127 RNPS1Q15287 305 aaKnown RBP3.22□□□□□ -1.89
HMGB3P11-201ENST00000440127 ZNF77Q15935 545 aa3.22□□□□□ -1.89
HMGB3P11-201ENST00000440127 NTRK2Q16620 822 aa3.22□□□□□ -1.89
HMGB3P11-201ENST00000440127 ZNF284Q2VY69 593 aa3.22□□□□□ -1.89
HMGB3P11-201ENST00000440127 FAM174BQ3ZCQ3 159 aa3.22□□□□□ -1.89
HMGB3P11-201ENST00000440127 ZNF805Q5CZA5 627 aa3.22□□□□□ -1.89
HMGB3P11-201ENST00000440127 NHSL2Q5HYW2 709 aa3.22□□□□□ -1.89
HMGB3P11-201ENST00000440127 LRRC73Q5JTD7 316 aa3.22□□□□□ -1.89
HMGB3P11-201ENST00000440127 ENTPD8Q5MY95 495 aa3.22□□□□□ -1.89
HMGB3P11-201ENST00000440127 LDLRAP1Q5SW96 308 aa3.22□□□□□ -1.89
HMGB3P11-201ENST00000440127 C9orf50Q5SZB4 431 aa3.22□□□□□ -1.89
HMGB3P11-201ENST00000440127 SERTAD4-AS1Q5TG53 156 aa3.22□□□□□ -1.89
HMGB3P11-201ENST00000440127 DCAF12L2Q5VW00 463 aa3.22□□□□□ -1.89
HMGB3P11-201ENST00000440127 LIPJQ5W064 366 aa3.22□□□□□ -1.89
HMGB3P11-201ENST00000440127 KRT80Q6KB66 452 aa3.22□□□□□ -1.89
HMGB3P11-201ENST00000440127 NEK5Q6P3R8 708 aa3.22□□□□□ -1.89
HMGB3P11-201ENST00000440127 FBXO46Q6PJ61 603 aaPredicted RBP3.22□□□□□ -1.89
HMGB3P11-201ENST00000440127 SUSD1Q6UWL2 747 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms