RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 GRAMD2AQ8IUY3 354 aa18.02■□□□□ 0.48
SHROOM1-204ENST00000440118 NUDCD3Q8IVD9 361 aa18.02■□□□□ 0.48
SHROOM1-204ENST00000440118 ZZZ3Q8IYH5 903 aa18.02■□□□□ 0.48
SHROOM1-204ENST00000440118 MREGQ8N565 214 aa18.02■□□□□ 0.48
SHROOM1-204ENST00000440118 CDRT4Q8N9R6 151 aa18.02■□□□□ 0.48
SHROOM1-204ENST00000440118 FNDC5Q8NAU1 212 aa18.02■□□□□ 0.48
SHROOM1-204ENST00000440118 MBD3L2Q8NHZ7 208 aaPredicted RBP18.02■□□□□ 0.48
SHROOM1-204ENST00000440118 ZPLD1Q8TCW7 415 aa18.02■□□□□ 0.48
SHROOM1-204ENST00000440118 PIK3R3Q92569 461 aa18.02■□□□□ 0.48
SHROOM1-204ENST00000440118 PKNOX2Q96KN3 472 aa18.02■□□□□ 0.48
SHROOM1-204ENST00000440118 TM9SF2Q99805 663 aa18.02■□□□□ 0.48
SHROOM1-204ENST00000440118 ACSS1Q9NUB1 689 aaPredicted RBP18.02■□□□□ 0.48
SHROOM1-204ENST00000440118 FLRT3Q9NZU0 649 aa18.02■□□□□ 0.48
SHROOM1-204ENST00000440118 L3MBTL1Q9Y468 752 aa18.02■□□□□ 0.48
SHROOM1-204ENST00000440118 SNX8Q9Y5X2 465 aa18.02■□□□□ 0.48
SHROOM1-204ENST00000440118 CSMD2Q7Z408 3487 aa18.02■□□□□ 0.47
SHROOM1-204ENST00000440118 MED12LQ86YW9 2145 aa18.01■□□□□ 0.47
SHROOM1-204ENST00000440118 WDR91A4D1P6 747 aa18.01■□□□□ 0.47
SHROOM1-204ENST00000440118 CLCA1A8K7I4 914 aa18.01■□□□□ 0.47
SHROOM1-204ENST00000440118 SCAMP2O15127 329 aaKnown RBP18.01■□□□□ 0.47
SHROOM1-204ENST00000440118 CTIFO43310 598 aaKnown RBP18.01■□□□□ 0.47
SHROOM1-204ENST00000440118 GMFGO60234 142 aa18.01■□□□□ 0.47
SHROOM1-204ENST00000440118 TBX19O60806 448 aa18.01■□□□□ 0.47
SHROOM1-204ENST00000440118 UTS2O95399 124 aa18.01■□□□□ 0.47
SHROOM1-204ENST00000440118 CREB1P16220 341 aa18.01■□□□□ 0.47
SHROOM1-204ENST00000440118 POU3F2P20265 443 aaPredicted RBP18.01■□□□□ 0.47
SHROOM1-204ENST00000440118 CTSSP25774 331 aa18.01■□□□□ 0.47
SHROOM1-204ENST00000440118 AGFG1P52594 562 aaKnown RBP18.01■□□□□ 0.47
SHROOM1-204ENST00000440118 GFRA1P56159 465 aa18.01■□□□□ 0.47
SHROOM1-204ENST00000440118 SNTB1Q13884 538 aaKnown RBP18.01■□□□□ 0.47
SHROOM1-204ENST00000440118 PDE7AQ13946 482 aa18.01■□□□□ 0.47
SHROOM1-204ENST00000440118 UBQLNLQ8IYU4 475 aa18.01■□□□□ 0.47
SHROOM1-204ENST00000440118 COX18Q8N8Q8 333 aa18.01■□□□□ 0.47
SHROOM1-204ENST00000440118 C9orf106Q8NAJ2 232 aa18.01■□□□□ 0.47
SHROOM1-204ENST00000440118 RNASE6Q93091 150 aaKnown RBP18.01■□□□□ 0.47
SHROOM1-204ENST00000440118 TUBGCP3Q96CW5 907 aa18.01■□□□□ 0.47
SHROOM1-204ENST00000440118 TMEM109Q9BVC6 243 aa18.01■□□□□ 0.47
SHROOM1-204ENST00000440118 PARD6BQ9BYG5 372 aa18.01■□□□□ 0.47
SHROOM1-204ENST00000440118 ACBD3Q9H3P7 528 aa18.01■□□□□ 0.47
SHROOM1-204ENST00000440118 ATAD3AQ9NVI7 634 aa18.01■□□□□ 0.47
SHROOM1-204ENST00000440118 MED11Q9P086 117 aa18.01■□□□□ 0.47
SHROOM1-204ENST00000440118 FOXD3Q9UJU5 478 aaPredicted RBP18.01■□□□□ 0.47
SHROOM1-204ENST00000440118 OTOGQ6ZRI0 2925 aa18.01■□□□□ 0.47
SHROOM1-204ENST00000440118 GXYLT2A0PJZ3 443 aa18■□□□□ 0.47
SHROOM1-204ENST00000440118 C17orf51A8MQB3 221 aa18■□□□□ 0.47
SHROOM1-204ENST00000440118 EMC8O43402 210 aa18■□□□□ 0.47
SHROOM1-204ENST00000440118 HPGDP15428 266 aa18■□□□□ 0.47
SHROOM1-204ENST00000440118 CHMP24386 653 aa18■□□□□ 0.47
SHROOM1-204ENST00000440118 CPA2P48052 419 aa18■□□□□ 0.47
SHROOM1-204ENST00000440118 SERPINB4P48594 390 aa18■□□□□ 0.47
SHROOM1-204ENST00000440118 PRIM2P49643 509 aa18■□□□□ 0.47
SHROOM1-204ENST00000440118 GAS1P54826 345 aa18■□□□□ 0.47
SHROOM1-204ENST00000440118 DLX5P56178 289 aa18■□□□□ 0.47
SHROOM1-204ENST00000440118 ZNF844Q08AG5 666 aa18■□□□□ 0.47
SHROOM1-204ENST00000440118 PTGR1Q14914 329 aa18■□□□□ 0.47
SHROOM1-204ENST00000440118 UGT3A2Q3SY77 523 aa18■□□□□ 0.47
SHROOM1-204ENST00000440118 SPDYE7PQ495Y7 208 aa18■□□□□ 0.47
SHROOM1-204ENST00000440118 XKR7Q5GH72 579 aa18■□□□□ 0.47
SHROOM1-204ENST00000440118 CPTPQ5TA50 214 aa18■□□□□ 0.47
SHROOM1-204ENST00000440118 GALNT10Q86SR1 603 aa18■□□□□ 0.47
SHROOM1-204ENST00000440118 MARCH3Q86UD3 253 aa18■□□□□ 0.47
SHROOM1-204ENST00000440118 MEIOBQ8N635 442 aa18■□□□□ 0.47
SHROOM1-204ENST00000440118 OR2M3Q8NG83 312 aa18■□□□□ 0.47
SHROOM1-204ENST00000440118 ZFP3Q96NJ6 502 aa18■□□□□ 0.47
SHROOM1-204ENST00000440118 PRPF18Q99633 342 aaKnown RBP18■□□□□ 0.47
SHROOM1-204ENST00000440118 ZCCHC3Q9NUD5 404 aaKnown RBP18■□□□□ 0.47
SHROOM1-204ENST00000440118 ZDHHC2Q9UIJ5 367 aa18■□□□□ 0.47
SHROOM1-204ENST00000440118 EIF3LQ9Y262 564 aaKnown RBP18■□□□□ 0.47
SHROOM1-204ENST00000440118 MRPS18CQ9Y3D5 142 aaKnown RBP18■□□□□ 0.47
SHROOM1-204ENST00000440118 TEP1Q99973 2627 aaKnown RBP18■□□□□ 0.47
SHROOM1-204ENST00000440118 SPG11Q96JI7 2443 aa17.99■□□□□ 0.47
SHROOM1-204ENST00000440118 TYROBPO43914 113 aa17.99■□□□□ 0.47
SHROOM1-204ENST00000440118 FADS1O60427 444 aa17.99■□□□□ 0.47
SHROOM1-204ENST00000440118 ALOX5P09917 674 aa17.99■□□□□ 0.47
SHROOM1-204ENST00000440118 MYZAPP0CAP1 466 aa17.99■□□□□ 0.47
SHROOM1-204ENST00000440118 ZNF708P17019 499 aa17.99■□□□□ 0.47
SHROOM1-204ENST00000440118 LHX2P50458 406 aa17.99■□□□□ 0.47
SHROOM1-204ENST00000440118 GRAMD1BQ3KR37 738 aa17.99■□□□□ 0.47
SHROOM1-204ENST00000440118 CEP85LQ5SZL2 805 aa17.99■□□□□ 0.47
SHROOM1-204ENST00000440118 KIF18BQ86Y91 864 aa17.99■□□□□ 0.47
SHROOM1-204ENST00000440118 FADS6Q8N9I5 356 aa17.99■□□□□ 0.47
SHROOM1-204ENST00000440118 OR7A2PQ8NGA2 310 aa17.99■□□□□ 0.47
SHROOM1-204ENST00000440118 DUSP19Q8WTR2 217 aa17.99■□□□□ 0.47
SHROOM1-204ENST00000440118 RNF138Q8WVD3 245 aa17.99■□□□□ 0.47
SHROOM1-204ENST00000440118 SMPDL3BQ92485 455 aa17.99■□□□□ 0.47
SHROOM1-204ENST00000440118 YIPF4Q9BSR8 244 aa17.99■□□□□ 0.47
SHROOM1-204ENST00000440118 HHATLQ9HCP6 504 aa17.99■□□□□ 0.47
SHROOM1-204ENST00000440118 PCNX3Q9H6A9 2034 aa17.98■□□□□ 0.47
SHROOM1-204ENST00000440118 A0A1W2PRB8 838 aa17.98■□□□□ 0.47
SHROOM1-204ENST00000440118 H3BML4 177 aa17.98■□□□□ 0.47
SHROOM1-204ENST00000440118 SYT5O00445 386 aa17.98■□□□□ 0.47
SHROOM1-204ENST00000440118 SEC14L5O43304 696 aa17.98■□□□□ 0.47
SHROOM1-204ENST00000440118 LYPLA1O75608 230 aaPredicted RBP17.98■□□□□ 0.47
SHROOM1-204ENST00000440118 ANGPTL1O95841 491 aa17.98■□□□□ 0.47
SHROOM1-204ENST00000440118 PEPDP12955 493 aa17.98■□□□□ 0.47
SHROOM1-204ENST00000440118 CLDN18P56856 261 aa17.98■□□□□ 0.47
SHROOM1-204ENST00000440118 EEFSECP57772 596 aaKnown RBP17.98■□□□□ 0.47
SHROOM1-204ENST00000440118 C17orf67Q0P5P2 114 aa17.98■□□□□ 0.47
SHROOM1-204ENST00000440118 MAD2L1Q13257 205 aaPredicted RBP17.98■□□□□ 0.47
SHROOM1-204ENST00000440118 CHI3L2Q15782 390 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms