RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 B3GLCTQ6Y288 498 aa8.04□□□□□ -1.12
HPS4-206ENST00000439453 TMEM91Q6ZNR0 172 aa8.04□□□□□ -1.12
HPS4-206ENST00000439453 SLC7A13Q8TCU3 470 aa8.04□□□□□ -1.12
HPS4-206ENST00000439453 MED8Q96G25 268 aa8.04□□□□□ -1.12
HPS4-206ENST00000439453 UBL7Q96S82 380 aaPredicted RBP8.04□□□□□ -1.12
HPS4-206ENST00000439453 RSPO3Q9BXY4 272 aaPredicted RBP8.04□□□□□ -1.12
HPS4-206ENST00000439453 NLNQ9BYT8 704 aa8.04□□□□□ -1.12
HPS4-206ENST00000439453 MVB12BQ9H7P6 319 aa8.04□□□□□ -1.12
HPS4-206ENST00000439453 IMP3Q9NV31 184 aaKnown RBP8.04□□□□□ -1.12
HPS4-206ENST00000439453 FBXW2Q9UKT8 454 aa8.04□□□□□ -1.12
HPS4-206ENST00000439453 TEX13CA0A0J9YWL9 993 aa8.03□□□□□ -1.12
HPS4-206ENST00000439453 CD8B2A6NJW9 211 aa8.03□□□□□ -1.12
HPS4-206ENST00000439453 KHNYNO15037 678 aaKnown RBP8.03□□□□□ -1.12
HPS4-206ENST00000439453 PRODHO43272 600 aa8.03□□□□□ -1.12
HPS4-206ENST00000439453 CD8BP10966 210 aa8.03□□□□□ -1.12
HPS4-206ENST00000439453 DNASE1P24855 282 aa8.03□□□□□ -1.12
HPS4-206ENST00000439453 EFNB1P98172 346 aa8.03□□□□□ -1.12
HPS4-206ENST00000439453 TCF15Q12870 199 aa8.03□□□□□ -1.12
HPS4-206ENST00000439453 NAE1Q13564 534 aa8.03□□□□□ -1.12
HPS4-206ENST00000439453 PRSS53Q2L4Q9 553 aa8.03□□□□□ -1.12
HPS4-206ENST00000439453 IDNKQ5T6J7 187 aa8.03□□□□□ -1.12
HPS4-206ENST00000439453 TMEM215Q68D42 235 aa8.03□□□□□ -1.12
HPS4-206ENST00000439453 KIAA0907Q7Z7F0 614 aaPredicted RBP8.03□□□□□ -1.12
HPS4-206ENST00000439453 LHFPL3Q86UP9 236 aa8.03□□□□□ -1.12
HPS4-206ENST00000439453 ZNF485Q8NCK3 441 aa8.03□□□□□ -1.12
HPS4-206ENST00000439453 KLHL15Q96M94 604 aa8.03□□□□□ -1.12
HPS4-206ENST00000439453 FUZQ9BT04 418 aa8.03□□□□□ -1.12
HPS4-206ENST00000439453 GSX2Q9BZM3 304 aa8.03□□□□□ -1.12
HPS4-206ENST00000439453 DPAGT1Q9H3H5 408 aa8.03□□□□□ -1.12
HPS4-206ENST00000439453 ZNF624Q9P2J8 865 aaPredicted RBP8.03□□□□□ -1.12
HPS4-206ENST00000439453 MAB21L2Q9Y586 359 aa8.03□□□□□ -1.12
HPS4-206ENST00000439453 LOC105369274A0A096LPK9 316 aa8.03□□□□□ -1.12
HPS4-206ENST00000439453 A0A1W2PPL8 197 aa8.03□□□□□ -1.12
HPS4-206ENST00000439453 A0A1W2PRB8 838 aa8.03□□□□□ -1.12
HPS4-206ENST00000439453 EEF1E1O43324 174 aaKnown RBP8.03□□□□□ -1.12
HPS4-206ENST00000439453 IFNA16P05015 189 aa8.03□□□□□ -1.12
HPS4-206ENST00000439453 BCHEP06276 602 aa8.03□□□□□ -1.12
HPS4-206ENST00000439453 AHCYP23526 432 aa8.03□□□□□ -1.12
HPS4-206ENST00000439453 COX10Q12887 443 aa8.03□□□□□ -1.12
HPS4-206ENST00000439453 PDE7AQ13946 482 aa8.03□□□□□ -1.12
HPS4-206ENST00000439453 LIPIQ6XZB0 460 aa8.03□□□□□ -1.12
HPS4-206ENST00000439453 OR4N4Q8N0Y3 316 aa8.03□□□□□ -1.12
HPS4-206ENST00000439453 MS4A15Q8N5U1 240 aa8.03□□□□□ -1.12
HPS4-206ENST00000439453 OR4D11Q8NGI4 311 aa8.03□□□□□ -1.12
HPS4-206ENST00000439453 ACOT12Q8WYK0 555 aa8.03□□□□□ -1.12
HPS4-206ENST00000439453 SLC9A6Q92581 669 aa8.03□□□□□ -1.12
HPS4-206ENST00000439453 RIT1Q92963 219 aa8.03□□□□□ -1.12
HPS4-206ENST00000439453 PDXPQ96GD0 296 aa8.03□□□□□ -1.12
HPS4-206ENST00000439453 OR4K3Q96R72 315 aa8.03□□□□□ -1.12
HPS4-206ENST00000439453 CDCP1Q9H5V8 836 aa8.03□□□□□ -1.12
HPS4-206ENST00000439453 CYSLTR2Q9NS75 346 aa8.03□□□□□ -1.12
HPS4-206ENST00000439453 LYARQ9NX58 379 aaKnown RBP8.03□□□□□ -1.12
HPS4-206ENST00000439453 KCMF1Q9P0J7 381 aa8.03□□□□□ -1.12
HPS4-206ENST00000439453 NUBP2Q9Y5Y2 271 aa8.03□□□□□ -1.12
HPS4-206ENST00000439453 DCHS1Q96JQ0 3298 aa8.03□□□□□ -1.12
HPS4-206ENST00000439453 A0A1B0GVI7 797 aa8.03□□□□□ -1.12
HPS4-206ENST00000439453 FAM170BA6NMN3 283 aa8.03□□□□□ -1.12
HPS4-206ENST00000439453 EPHX1P07099 455 aa8.03□□□□□ -1.12
HPS4-206ENST00000439453 TYRP14679 529 aa8.03□□□□□ -1.12
HPS4-206ENST00000439453 CELP19835 753 aa8.03□□□□□ -1.12
HPS4-206ENST00000439453 KIR2DL1P43626 348 aaPredicted RBP8.03□□□□□ -1.12
HPS4-206ENST00000439453 MTNR1AP48039 350 aa8.03□□□□□ -1.12
HPS4-206ENST00000439453 SMIM11AP58511 58 aa8.03□□□□□ -1.12
HPS4-206ENST00000439453 CDK5Q00535 292 aa8.03□□□□□ -1.12
HPS4-206ENST00000439453 PLEKHS1Q5SXH7 462 aa8.03□□□□□ -1.12
HPS4-206ENST00000439453 ADGRF1Q5T601 910 aa8.03□□□□□ -1.12
HPS4-206ENST00000439453 PODNL1Q6PEZ8 512 aa8.03□□□□□ -1.12
HPS4-206ENST00000439453 BHLHB9Q6PI77 547 aa8.03□□□□□ -1.12
HPS4-206ENST00000439453 SERPINA13PQ6UXR4 307 aa8.03□□□□□ -1.12
HPS4-206ENST00000439453 SLC36A4Q6YBV0 504 aa8.03□□□□□ -1.12
HPS4-206ENST00000439453 RFLNAQ6ZTI6 216 aa8.03□□□□□ -1.12
HPS4-206ENST00000439453 CHMP1BQ7LBR1 199 aa8.03□□□□□ -1.12
HPS4-206ENST00000439453 KRT74Q7RTS7 529 aa8.03□□□□□ -1.12
HPS4-206ENST00000439453 SRFBP1Q8NEF9 429 aaKnown RBP8.03□□□□□ -1.12
HPS4-206ENST00000439453 OR5M3Q8NGP4 307 aa8.03□□□□□ -1.12
HPS4-206ENST00000439453 SLC38A5Q8WUX1 472 aa8.03□□□□□ -1.12
HPS4-206ENST00000439453 ST8SIA4Q92187 359 aa8.03□□□□□ -1.12
HPS4-206ENST00000439453 HSD17B8Q92506 261 aa8.03□□□□□ -1.12
HPS4-206ENST00000439453 WFDC6Q9BQY6 131 aa8.03□□□□□ -1.12
HPS4-206ENST00000439453 CHRDQ9H2X0 955 aa8.03□□□□□ -1.12
HPS4-206ENST00000439453 MEIKINA0A087WXM9 373 aa8.02□□□□□ -1.12
HPS4-206ENST00000439453 A0A1W2PRG6 482 aa8.02□□□□□ -1.12
HPS4-206ENST00000439453 NPIPB15A6NHN6 443 aaPredicted RBP8.02□□□□□ -1.12
HPS4-206ENST00000439453 PRRT4C9JH25 899 aa8.02□□□□□ -1.12
HPS4-206ENST00000439453 H3BUI4 141 aa8.02□□□□□ -1.12
HPS4-206ENST00000439453 TCRBP04435 133 aa8.02□□□□□ -1.12
HPS4-206ENST00000439453 ACSM4P0C7M7 580 aa8.02□□□□□ -1.12
HPS4-206ENST00000439453 ZP3P21754 424 aa8.02□□□□□ -1.12
HPS4-206ENST00000439453 MMP11P24347 488 aa8.02□□□□□ -1.12
HPS4-206ENST00000439453 RPS26P62854 115 aaKnown RBP8.02□□□□□ -1.12
HPS4-206ENST00000439453 TAP2Q03519 686 aa8.02□□□□□ -1.12
HPS4-206ENST00000439453 CRYZQ08257 329 aaKnown RBP8.02□□□□□ -1.12
HPS4-206ENST00000439453 UAP1L1Q3KQV9 507 aa8.02□□□□□ -1.12
HPS4-206ENST00000439453 MINDY4Q4G0A6 757 aa8.02□□□□□ -1.12
HPS4-206ENST00000439453 TNFAIP8L2Q6P589 184 aaPredicted RBP8.02□□□□□ -1.12
HPS4-206ENST00000439453 AGTRAPQ6RW13 159 aa8.02□□□□□ -1.12
HPS4-206ENST00000439453 COMMD6Q7Z4G1 85 aa8.02□□□□□ -1.12
HPS4-206ENST00000439453 GPR135Q8IZ08 494 aa8.02□□□□□ -1.12
HPS4-206ENST00000439453 PIAS4Q8N2W9 510 aaPredicted RBP8.02□□□□□ -1.12
HPS4-206ENST00000439453 C16orf78Q8WTQ4 265 aa8.02□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms