RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 ZIC2O95409 532 aaPredicted RBP19.09■□□□□ 0.65
CHD3-204ENST00000439235 NADKO95544 446 aaPredicted RBP19.09■□□□□ 0.65
CHD3-204ENST00000439235 ITGA3P26006 1051 aa19.09■□□□□ 0.65
CHD3-204ENST00000439235 EIF2S3P41091 472 aaKnown RBP19.09■□□□□ 0.65
CHD3-204ENST00000439235 PNLIPRP2P54317 469 aa19.09■□□□□ 0.65
CHD3-204ENST00000439235 EFR3AQ14156 821 aa19.09■□□□□ 0.65
CHD3-204ENST00000439235 GPR68Q15743 365 aa19.09■□□□□ 0.65
CHD3-204ENST00000439235 BROXQ5VW32 411 aa19.09■□□□□ 0.65
CHD3-204ENST00000439235 AP1ARQ63HQ0 302 aa19.09■□□□□ 0.65
CHD3-204ENST00000439235 H3F3CQ6NXT2 135 aa19.09■□□□□ 0.65
CHD3-204ENST00000439235 C16orf47Q6ZP98 133 aaPredicted RBP19.09■□□□□ 0.65
CHD3-204ENST00000439235 GALNT10Q86SR1 603 aa19.09■□□□□ 0.65
CHD3-204ENST00000439235 ARMC8Q8IUR7 673 aa19.09■□□□□ 0.65
CHD3-204ENST00000439235 PEX5LQ8IYB4 626 aa19.09■□□□□ 0.65
CHD3-204ENST00000439235 GOLM1Q8NBJ4 401 aa19.09■□□□□ 0.65
CHD3-204ENST00000439235 BRIX1Q8TDN6 353 aaKnown RBP19.09■□□□□ 0.65
CHD3-204ENST00000439235 OIT3Q8WWZ8 545 aa19.09■□□□□ 0.65
CHD3-204ENST00000439235 EFHD2Q96C19 240 aaPredicted RBP19.09■□□□□ 0.65
CHD3-204ENST00000439235 RSRC1Q96IZ7 334 aaKnown RBP19.09■□□□□ 0.65
CHD3-204ENST00000439235 LMF1Q96S06 567 aa19.09■□□□□ 0.65
CHD3-204ENST00000439235 RASL10BQ96S79 203 aa19.09■□□□□ 0.65
CHD3-204ENST00000439235 HOXD1Q9GZZ0 328 aa19.09■□□□□ 0.65
CHD3-204ENST00000439235 CDCP1Q9H5V8 836 aa19.09■□□□□ 0.65
CHD3-204ENST00000439235 SEC14L3Q9UDX4 400 aa19.09■□□□□ 0.65
CHD3-204ENST00000439235 TEKT2Q9UIF3 430 aa19.09■□□□□ 0.65
CHD3-204ENST00000439235 IFT52Q9Y366 437 aa19.09■□□□□ 0.65
CHD3-204ENST00000439235 EFSO43281 561 aa19.08■□□□□ 0.64
CHD3-204ENST00000439235 TSPAN2O60636 221 aa19.08■□□□□ 0.64
CHD3-204ENST00000439235 ITGA10O75578 1167 aa19.08■□□□□ 0.64
CHD3-204ENST00000439235 PPM1BO75688 479 aa19.08■□□□□ 0.64
CHD3-204ENST00000439235 OPN1SWP03999 348 aa19.08■□□□□ 0.64
CHD3-204ENST00000439235 SSR4P51571 173 aa19.08■□□□□ 0.64
CHD3-204ENST00000439235 MLF1P58340 268 aa19.08■□□□□ 0.64
CHD3-204ENST00000439235 CCNIQ14094 377 aa19.08■□□□□ 0.64
CHD3-204ENST00000439235 ST3GAL2Q16842 350 aa19.08■□□□□ 0.64
CHD3-204ENST00000439235 CYBRD1Q53TN4 286 aa19.08■□□□□ 0.64
CHD3-204ENST00000439235 OPN5Q6U736 354 aa19.08■□□□□ 0.64
CHD3-204ENST00000439235 CBLL1Q75N03 491 aa19.08■□□□□ 0.64
CHD3-204ENST00000439235 EIF3MQ7L2H7 374 aaKnown RBP19.08■□□□□ 0.64
CHD3-204ENST00000439235 ZAR1Q86SH2 424 aa19.08■□□□□ 0.64
CHD3-204ENST00000439235 SPACA3Q8IXA5 215 aa19.08■□□□□ 0.64
CHD3-204ENST00000439235 DND1Q8IYX4 353 aaKnown RBP19.08■□□□□ 0.64
CHD3-204ENST00000439235 LZICQ8WZA0 190 aa19.08■□□□□ 0.64
CHD3-204ENST00000439235 TAMM41Q96BW9 452 aa19.08■□□□□ 0.64
CHD3-204ENST00000439235 ZNF354BQ96LW1 612 aa19.08■□□□□ 0.64
CHD3-204ENST00000439235 FBXO34Q9NWN3 711 aa19.08■□□□□ 0.64
CHD3-204ENST00000439235 SSUH2Q9Y2M2 353 aa19.08■□□□□ 0.64
CHD3-204ENST00000439235 TCRBV5S2A0A599 114 aa19.07■□□□□ 0.64
CHD3-204ENST00000439235 OR6C70A6NIJ9 312 aa19.07■□□□□ 0.64
CHD3-204ENST00000439235 AGAP5A6NIR3 686 aa19.07■□□□□ 0.64
CHD3-204ENST00000439235 SUV39H1O43463 412 aa19.07■□□□□ 0.64
CHD3-204ENST00000439235 MFN2O95140 757 aa19.07■□□□□ 0.64
CHD3-204ENST00000439235 ZNF682O95780 498 aa19.07■□□□□ 0.64
CHD3-204ENST00000439235 DBIP07108 87 aaKnown RBP19.07■□□□□ 0.64
CHD3-204ENST00000439235 C8BP07358 591 aa19.07■□□□□ 0.64
CHD3-204ENST00000439235 THBS1P07996 1170 aa19.07■□□□□ 0.64
CHD3-204ENST00000439235 FBXO45P0C2W1 286 aa19.07■□□□□ 0.64
CHD3-204ENST00000439235 DCTP40126 519 aa19.07■□□□□ 0.64
CHD3-204ENST00000439235 MEP1AQ16819 746 aa19.07■□□□□ 0.64
CHD3-204ENST00000439235 LIN52Q52LA3 116 aa19.07■□□□□ 0.64
CHD3-204ENST00000439235 CCDC81Q6ZN84 652 aa19.07■□□□□ 0.64
CHD3-204ENST00000439235 LRRC69Q6ZNQ3 347 aa19.07■□□□□ 0.64
CHD3-204ENST00000439235 SIRT6Q8N6T7 355 aa19.07■□□□□ 0.64
CHD3-204ENST00000439235 ZNF527Q8NB42 609 aa19.07■□□□□ 0.64
CHD3-204ENST00000439235 ADOQ96SZ5 270 aa19.07■□□□□ 0.64
CHD3-204ENST00000439235 ABI3Q9P2A4 366 aa19.07■□□□□ 0.64
CHD3-204ENST00000439235 ZNF232Q9UNY5 417 aa19.07■□□□□ 0.64
CHD3-204ENST00000439235 ZFHX4Q86UP3 3567 aa19.07■□□□□ 0.64
CHD3-204ENST00000439235 SPTBN2O15020 2390 aa19.06■□□□□ 0.64
CHD3-204ENST00000439235 TCRBV3S1A0A5B6 114 aa19.06■□□□□ 0.64
CHD3-204ENST00000439235 UTS2O95399 124 aa19.06■□□□□ 0.64
CHD3-204ENST00000439235 GPIP06744 558 aa19.06■□□□□ 0.64
CHD3-204ENST00000439235 PABPC4LP0CB38 370 aaKnown RBP19.06■□□□□ 0.64
CHD3-204ENST00000439235 UMPSP11172 480 aa19.06■□□□□ 0.64
CHD3-204ENST00000439235 CYP4B1P13584 511 aa19.06■□□□□ 0.64
CHD3-204ENST00000439235 RPS4Y1P22090 263 aaKnown RBP19.06■□□□□ 0.64
CHD3-204ENST00000439235 PSMA4P25789 261 aaKnown RBP19.06■□□□□ 0.64
CHD3-204ENST00000439235 CRYBA2P53672 197 aa19.06■□□□□ 0.64
CHD3-204ENST00000439235 ATP12AP54707 1039 aa19.06■□□□□ 0.64
CHD3-204ENST00000439235 SOX8P57073 446 aa19.06■□□□□ 0.64
CHD3-204ENST00000439235 ELF3P78545 371 aaPredicted RBP19.06■□□□□ 0.64
CHD3-204ENST00000439235 RHDQ02161 417 aa19.06■□□□□ 0.64
CHD3-204ENST00000439235 LARS2Q15031 903 aaKnown RBP19.06■□□□□ 0.64
CHD3-204ENST00000439235 ZNF141Q15928 474 aa19.06■□□□□ 0.64
CHD3-204ENST00000439235 ZNF311Q5JNZ3 666 aa19.06■□□□□ 0.64
CHD3-204ENST00000439235 ACER2Q5QJU3 275 aa19.06■□□□□ 0.64
CHD3-204ENST00000439235 FCRLBQ6BAA4 426 aa19.06■□□□□ 0.64
CHD3-204ENST00000439235 GALNT16Q8N428 558 aa19.06■□□□□ 0.64
CHD3-204ENST00000439235 OR52P1PQ8NH57 321 aa19.06■□□□□ 0.64
CHD3-204ENST00000439235 ASB15Q8WXK1 588 aa19.06■□□□□ 0.64
CHD3-204ENST00000439235 STMN2Q93045 179 aa19.06■□□□□ 0.64
CHD3-204ENST00000439235 SPACA9Q96E40 222 aaPredicted RBP19.06■□□□□ 0.64
CHD3-204ENST00000439235 DCBLD2Q96PD2 775 aa19.06■□□□□ 0.64
CHD3-204ENST00000439235 UGT2B28Q9BY64 529 aa19.06■□□□□ 0.64
CHD3-204ENST00000439235 QRSL1Q9H0R6 528 aaKnown RBP19.06■□□□□ 0.64
CHD3-204ENST00000439235 ING2Q9H160 280 aa19.06■□□□□ 0.64
CHD3-204ENST00000439235 UBQLN4Q9NRR5 601 aa19.06■□□□□ 0.64
CHD3-204ENST00000439235 BAG5Q9UL15 447 aa19.06■□□□□ 0.64
CHD3-204ENST00000439235 NPIPA5A0A0B4J1W7 369 aa19.05■□□□□ 0.64
CHD3-204ENST00000439235 DHRS12A0PJE2 317 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms