RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 SPG11Q96JI7 2443 aa16.69■□□□□ 0.26
AC004540.1-201ENST00000439120 SLC22A20A6NK97 555 aa16.69■□□□□ 0.26
AC004540.1-201ENST00000439120 C17orf51A8MQB3 221 aa16.69■□□□□ 0.26
AC004540.1-201ENST00000439120 AKAP10O43572 662 aa16.69■□□□□ 0.26
AC004540.1-201ENST00000439120 FADS1O60427 444 aa16.69■□□□□ 0.26
AC004540.1-201ENST00000439120 TRIM13O60858 407 aa16.69■□□□□ 0.26
AC004540.1-201ENST00000439120 IFI6P09912 130 aa16.69■□□□□ 0.26
AC004540.1-201ENST00000439120 LINC00032P0C843 101 aa16.69■□□□□ 0.26
AC004540.1-201ENST00000439120 PRPS2P11908 318 aa16.69■□□□□ 0.26
AC004540.1-201ENST00000439120 GABRA3P34903 492 aa16.69■□□□□ 0.26
AC004540.1-201ENST00000439120 PRKAG1P54619 331 aa16.69■□□□□ 0.26
AC004540.1-201ENST00000439120 PCLAFQ15004 111 aa16.69■□□□□ 0.26
AC004540.1-201ENST00000439120 KIAA0040Q15053 153 aa16.69■□□□□ 0.26
AC004540.1-201ENST00000439120 GALNTL6Q49A17 601 aa16.69■□□□□ 0.26
AC004540.1-201ENST00000439120 DDIASQ8IXT1 998 aa16.69■□□□□ 0.26
AC004540.1-201ENST00000439120 CEP70Q8NHQ1 597 aa16.69■□□□□ 0.26
AC004540.1-201ENST00000439120 DUSP19Q8WTR2 217 aa16.69■□□□□ 0.26
AC004540.1-201ENST00000439120 CIDECQ96AQ7 238 aaPredicted RBP16.69■□□□□ 0.26
AC004540.1-201ENST00000439120 ZBED6CLQ96FA7 236 aaPredicted RBP16.69■□□□□ 0.26
AC004540.1-201ENST00000439120 TSSK3Q96PN8 268 aa16.69■□□□□ 0.26
AC004540.1-201ENST00000439120 PIGQQ9BRB3 760 aa16.69■□□□□ 0.26
AC004540.1-201ENST00000439120 GATA5Q9BWX5 397 aaPredicted RBP16.69■□□□□ 0.26
AC004540.1-201ENST00000439120 REEP4Q9H6H4 257 aa16.69■□□□□ 0.26
AC004540.1-201ENST00000439120 FLRT3Q9NZU0 649 aa16.69■□□□□ 0.26
AC004540.1-201ENST00000439120 SH3BP4Q9P0V3 963 aa16.69■□□□□ 0.26
AC004540.1-201ENST00000439120 H3BML4 177 aa16.68■□□□□ 0.26
AC004540.1-201ENST00000439120 LINC01387J3KSC0 135 aa16.68■□□□□ 0.26
AC004540.1-201ENST00000439120 SEC14L5O43304 696 aa16.68■□□□□ 0.26
AC004540.1-201ENST00000439120 HCRTR2O43614 444 aa16.68■□□□□ 0.26
AC004540.1-201ENST00000439120 SMNDC1O75940 238 aaKnown RBP eCLIP16.68■□□□□ 0.26
AC004540.1-201ENST00000439120 GOSR1O95249 250 aa16.68■□□□□ 0.26
AC004540.1-201ENST00000439120 UTS2O95399 124 aa16.68■□□□□ 0.26
AC004540.1-201ENST00000439120 DDX5P17844 614 aaKnown RBP16.68■□□□□ 0.26
AC004540.1-201ENST00000439120 MANFP55145 182 aaKnown RBP16.68■□□□□ 0.26
AC004540.1-201ENST00000439120 B3GALT5-AS1P59052 145 aa16.68■□□□□ 0.26
AC004540.1-201ENST00000439120 PPP2R2AP63151 447 aa16.68■□□□□ 0.26
AC004540.1-201ENST00000439120 SLC18A2Q05940 514 aa16.68■□□□□ 0.26
AC004540.1-201ENST00000439120 C17orf67Q0P5P2 114 aa16.68■□□□□ 0.26
AC004540.1-201ENST00000439120 MARCH3Q86UD3 253 aa16.68■□□□□ 0.26
AC004540.1-201ENST00000439120 CNEP1R1Q8N9A8 125 aa16.68■□□□□ 0.26
AC004540.1-201ENST00000439120 CLHC1Q8NHS4 586 aa16.68■□□□□ 0.26
AC004540.1-201ENST00000439120 SLC9A6Q92581 669 aa16.68■□□□□ 0.26
AC004540.1-201ENST00000439120 APOPT1Q96IL0 206 aa16.68■□□□□ 0.26
AC004540.1-201ENST00000439120 EML4Q9HC35 981 aaKnown RBP16.68■□□□□ 0.26
AC004540.1-201ENST00000439120 NDRG3Q9UGV2 375 aa16.68■□□□□ 0.26
AC004540.1-201ENST00000439120 TMED5Q9Y3A6 229 aa16.68■□□□□ 0.26
AC004540.1-201ENST00000439120 A0A1W2PNV4 684 aa16.67■□□□□ 0.26
AC004540.1-201ENST00000439120 SH3D21A4FU49 640 aa16.67■□□□□ 0.26
AC004540.1-201ENST00000439120 B4DXG7 233 aa16.67■□□□□ 0.26
AC004540.1-201ENST00000439120 NPIPB8E9PQR5 432 aa16.67■□□□□ 0.26
AC004540.1-201ENST00000439120 CASKO14936 926 aa16.67■□□□□ 0.26
AC004540.1-201ENST00000439120 GMFGO60234 142 aa16.67■□□□□ 0.26
AC004540.1-201ENST00000439120 TGM6O95932 706 aa16.67■□□□□ 0.26
AC004540.1-201ENST00000439120 CRHP06850 196 aa16.67■□□□□ 0.26
AC004540.1-201ENST00000439120 SDC1P18827 310 aa16.67■□□□□ 0.26
AC004540.1-201ENST00000439120 IFFO1Q0D2I5 559 aa16.67■□□□□ 0.26
AC004540.1-201ENST00000439120 KANK2Q63ZY3 851 aa16.67■□□□□ 0.26
AC004540.1-201ENST00000439120 Q6ZSR9 355 aa16.67■□□□□ 0.26
AC004540.1-201ENST00000439120 CDRT4Q8N9R6 151 aa16.67■□□□□ 0.26
AC004540.1-201ENST00000439120 NUP43Q8NFH3 380 aa16.67■□□□□ 0.26
AC004540.1-201ENST00000439120 OR2T11Q8NH01 316 aa16.67■□□□□ 0.26
AC004540.1-201ENST00000439120 SMPDL3BQ92485 455 aa16.67■□□□□ 0.26
AC004540.1-201ENST00000439120 PIK3R3Q92569 461 aa16.67■□□□□ 0.26
AC004540.1-201ENST00000439120 C1GALT1C1Q96EU7 318 aa16.67■□□□□ 0.26
AC004540.1-201ENST00000439120 ZNF764Q96H86 408 aaPredicted RBP16.67■□□□□ 0.26
AC004540.1-201ENST00000439120 DACH2Q96NX9 599 aa16.67■□□□□ 0.26
AC004540.1-201ENST00000439120 MS4A4EQ96PG1 132 aa16.67■□□□□ 0.26
AC004540.1-201ENST00000439120 CXXC4Q9H2H0 198 aa16.67■□□□□ 0.26
AC004540.1-201ENST00000439120 HHATLQ9HCP6 504 aa16.67■□□□□ 0.26
AC004540.1-201ENST00000439120 STOML1Q9UBI4 398 aa16.67■□□□□ 0.26
AC004540.1-201ENST00000439120 MED12LQ86YW9 2145 aa16.66■□□□□ 0.26
AC004540.1-201ENST00000439120 UQCRHLA0A096LP55 91 aa16.66■□□□□ 0.26
AC004540.1-201ENST00000439120 GXYLT2A0PJZ3 443 aa16.66■□□□□ 0.26
AC004540.1-201ENST00000439120 MSTNO14793 375 aa16.66■□□□□ 0.26
AC004540.1-201ENST00000439120 ANGPTL1O95841 491 aa16.66■□□□□ 0.26
AC004540.1-201ENST00000439120 RAF1P04049 648 aa16.66■□□□□ 0.26
AC004540.1-201ENST00000439120 CD99P14209 185 aa16.66■□□□□ 0.26
AC004540.1-201ENST00000439120 ASMTP46597 345 aa16.66■□□□□ 0.26
AC004540.1-201ENST00000439120 RPS3AP61247 264 aaKnown RBP16.66■□□□□ 0.26
AC004540.1-201ENST00000439120 KEAP1Q14145 624 aa16.66■□□□□ 0.26
AC004540.1-201ENST00000439120 RFTN2Q52LD8 501 aaPredicted RBP16.66■□□□□ 0.26
AC004540.1-201ENST00000439120 PAMR1Q6UXH9 720 aa16.66■□□□□ 0.26
AC004540.1-201ENST00000439120 RNF165Q6ZSG1 346 aa16.66■□□□□ 0.26
AC004540.1-201ENST00000439120 R3HCC1LQ7Z5L2 792 aaKnown RBP16.66■□□□□ 0.26
AC004540.1-201ENST00000439120 CAMKMTQ7Z624 323 aa16.66■□□□□ 0.26
AC004540.1-201ENST00000439120 RIBC1Q8N443 379 aaPredicted RBP16.66■□□□□ 0.26
AC004540.1-201ENST00000439120 OR5M1Q8NGP8 315 aa16.66■□□□□ 0.26
AC004540.1-201ENST00000439120 FBXO30Q8TB52 745 aa16.66■□□□□ 0.26
AC004540.1-201ENST00000439120 TWIST2Q8WVJ9 160 aa16.66■□□□□ 0.26
AC004540.1-201ENST00000439120 FAM111AQ96PZ2 611 aa16.66■□□□□ 0.26
AC004540.1-201ENST00000439120 PINK1Q9BXM7 581 aa16.66■□□□□ 0.26
AC004540.1-201ENST00000439120 MKS1Q9NXB0 559 aa16.66■□□□□ 0.26
AC004540.1-201ENST00000439120 BAIAP2L1Q9UHR4 511 aa16.66■□□□□ 0.26
AC004540.1-201ENST00000439120 ZNF337Q9Y3M9 751 aa16.66■□□□□ 0.26
AC004540.1-201ENST00000439120 DNAJC15Q9Y5T4 150 aa16.66■□□□□ 0.26
AC004540.1-201ENST00000439120 MPDZO75970 2070 aa16.65■□□□□ 0.26
AC004540.1-201ENST00000439120 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.65■□□□□ 0.26
AC004540.1-201ENST00000439120 OR2M5A3KFT3 312 aa16.65■□□□□ 0.26
AC004540.1-201ENST00000439120 A8MXE2 369 aa16.65■□□□□ 0.26
AC004540.1-201ENST00000439120 TMEM114B3SHH9 223 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms