RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 ARF5P84085 180 aa2.64□□□□□ -1.99
HMGB3P12-201ENST00000438745 SEMG2Q02383 582 aa2.64□□□□□ -1.99
HMGB3P12-201ENST00000438745 MECOMQ03112 1051 aa2.64□□□□□ -1.99
HMGB3P12-201ENST00000438745 FCHO2Q0JRZ9 810 aa2.64□□□□□ -1.99
HMGB3P12-201ENST00000438745 HTR4Q13639 388 aa2.64□□□□□ -1.99
HMGB3P12-201ENST00000438745 LCE3EQ5T5B0 92 aa2.64□□□□□ -1.99
HMGB3P12-201ENST00000438745 RTL6Q6ICC9 239 aa2.64□□□□□ -1.99
HMGB3P12-201ENST00000438745 CD164L2Q6UWJ8 174 aa2.64□□□□□ -1.99
HMGB3P12-201ENST00000438745 ZNF410Q86VK4 478 aa2.64□□□□□ -1.99
HMGB3P12-201ENST00000438745 CATSPER3Q86XQ3 398 aa2.64□□□□□ -1.99
HMGB3P12-201ENST00000438745 RNF130Q86XS8 419 aa2.64□□□□□ -1.99
HMGB3P12-201ENST00000438745 ABHD12Q8N2K0 398 aa2.64□□□□□ -1.99
HMGB3P12-201ENST00000438745 LINC00612Q8N6U2 182 aa2.64□□□□□ -1.99
HMGB3P12-201ENST00000438745 BANPQ8N9N5 519 aa2.64□□□□□ -1.99
HMGB3P12-201ENST00000438745 COLGALT1Q8NBJ5 622 aa2.64□□□□□ -1.99
HMGB3P12-201ENST00000438745 C17orf47Q8NEP4 570 aa2.64□□□□□ -1.99
HMGB3P12-201ENST00000438745 OR6F1Q8NGZ6 308 aa2.64□□□□□ -1.99
HMGB3P12-201ENST00000438745 NPRL2Q8WTW4 380 aa2.64□□□□□ -1.99
HMGB3P12-201ENST00000438745 RASL10AQ92737 203 aa2.64□□□□□ -1.99
HMGB3P12-201ENST00000438745 ATP6V0A1Q93050 837 aa2.64□□□□□ -1.99
HMGB3P12-201ENST00000438745 NABP1Q96AH0 204 aa2.64□□□□□ -1.99
HMGB3P12-201ENST00000438745 ESAMQ96AP7 390 aa2.64□□□□□ -1.99
HMGB3P12-201ENST00000438745 MRPL53Q96EL3 112 aaKnown RBP2.64□□□□□ -1.99
HMGB3P12-201ENST00000438745 TAAR6Q96RI8 345 aa2.64□□□□□ -1.99
HMGB3P12-201ENST00000438745 FAM213AQ9BRX8 229 aa2.64□□□□□ -1.99
HMGB3P12-201ENST00000438745 CCDC28BQ9BUN5 200 aa2.64□□□□□ -1.99
HMGB3P12-201ENST00000438745 KRTAP4-3Q9BYR4 195 aa2.64□□□□□ -1.99
HMGB3P12-201ENST00000438745 DPEP3Q9H4B8 488 aa2.64□□□□□ -1.99
HMGB3P12-201ENST00000438745 THAP9Q9H5L6 903 aa2.64□□□□□ -1.99
HMGB3P12-201ENST00000438745 VCPKMTQ9H867 229 aa2.64□□□□□ -1.99
HMGB3P12-201ENST00000438745 HEBP1Q9NRV9 189 aa2.64□□□□□ -1.99
HMGB3P12-201ENST00000438745 DEPPQ9NTK1 212 aa2.64□□□□□ -1.99
HMGB3P12-201ENST00000438745 AATFQ9NY61 560 aaKnown RBP eCLIP2.64□□□□□ -1.99
HMGB3P12-201ENST00000438745 CTSZQ9UBR2 303 aa2.64□□□□□ -1.99
HMGB3P12-201ENST00000438745 FETUBQ9UGM5 382 aa2.64□□□□□ -1.99
HMGB3P12-201ENST00000438745 TEKT2Q9UIF3 430 aa2.64□□□□□ -1.99
HMGB3P12-201ENST00000438745 ISY1Q9ULR0 285 aaKnown RBP2.64□□□□□ -1.99
HMGB3P12-201ENST00000438745 TDRKHQ9Y2W6 561 aaKnown RBP2.64□□□□□ -1.99
HMGB3P12-201ENST00000438745 AUP1Q9Y679 476 aa2.64□□□□□ -1.99
HMGB3P12-201ENST00000438745 STYXL1Q9Y6J8 313 aa2.64□□□□□ -1.99
HMGB3P12-201ENST00000438745 DDX49Q9Y6V7 483 aaKnown RBP2.64□□□□□ -1.99
HMGB3P12-201ENST00000438745 DOPEY2Q9Y3R5 2298 aa2.64□□□□□ -1.99
HMGB3P12-201ENST00000438745 MICAL3Q7RTP6 2002 aa2.64□□□□□ -1.99
HMGB3P12-201ENST00000438745 PCNX1Q96RV3 2341 aa2.64□□□□□ -1.99
HMGB3P12-201ENST00000438745 ABCA2Q9BZC7 2435 aa2.63□□□□□ -1.99
HMGB3P12-201ENST00000438745 SHROOM3Q8TF72 1996 aa2.63□□□□□ -1.99
HMGB3P12-201ENST00000438745 KALRNO60229 2985 aa2.63□□□□□ -1.99
HMGB3P12-201ENST00000438745 TRBV5-4A0A0C4DH59 114 aa2.63□□□□□ -1.99
HMGB3P12-201ENST00000438745 BCLAF3A2AJT9 711 aaKnown RBP2.63□□□□□ -1.99
HMGB3P12-201ENST00000438745 SHISA9B4DS77 424 aa2.63□□□□□ -1.99
HMGB3P12-201ENST00000438745 TLR4O00206 839 aa2.63□□□□□ -1.99
HMGB3P12-201ENST00000438745 SLC28A1O00337 649 aa2.63□□□□□ -1.99
HMGB3P12-201ENST00000438745 HSF2BPO75031 334 aa2.63□□□□□ -1.99
HMGB3P12-201ENST00000438745 IGHV3-13P01766 116 aa2.63□□□□□ -1.99
HMGB3P12-201ENST00000438745 FHP07954 510 aa2.63□□□□□ -1.99
HMGB3P12-201ENST00000438745 VDRP11473 427 aa2.63□□□□□ -1.99
HMGB3P12-201ENST00000438745 HLA-EP13747 358 aa2.63□□□□□ -1.99
HMGB3P12-201ENST00000438745 AREGP15514 252 aa2.63□□□□□ -1.99
HMGB3P12-201ENST00000438745 MTIF2P46199 727 aaKnown RBP2.63□□□□□ -1.99
HMGB3P12-201ENST00000438745 NT5C2P49902 561 aa2.63□□□□□ -1.99
HMGB3P12-201ENST00000438745 CCR4P51679 360 aa2.63□□□□□ -1.99
HMGB3P12-201ENST00000438745 RIDAP52758 137 aaKnown RBP2.63□□□□□ -1.99
HMGB3P12-201ENST00000438745 CRYBA2P53672 197 aa2.63□□□□□ -1.99
HMGB3P12-201ENST00000438745 UCNP55089 124 aa2.63□□□□□ -1.99
HMGB3P12-201ENST00000438745 RIPK4P57078 832 aa2.63□□□□□ -1.99
HMGB3P12-201ENST00000438745 SRPXP78539 464 aa2.63□□□□□ -1.99
HMGB3P12-201ENST00000438745 CCDC173Q0VFZ6 552 aa2.63□□□□□ -1.99
HMGB3P12-201ENST00000438745 COX10Q12887 443 aa2.63□□□□□ -1.99
HMGB3P12-201ENST00000438745 SLC17A1Q14916 467 aa2.63□□□□□ -1.99
HMGB3P12-201ENST00000438745 P2RY14Q15391 338 aa2.63□□□□□ -1.99
HMGB3P12-201ENST00000438745 SIX1Q15475 284 aaPredicted RBP2.63□□□□□ -1.99
HMGB3P12-201ENST00000438745 OR1C1Q15619 314 aa2.63□□□□□ -1.99
HMGB3P12-201ENST00000438745 MAPK6Q16659 721 aa2.63□□□□□ -1.99
HMGB3P12-201ENST00000438745 PRAMEF7Q5VXH5 474 aa2.63□□□□□ -1.99
HMGB3P12-201ENST00000438745 TATDN1Q6P1N9 297 aa2.63□□□□□ -1.99
HMGB3P12-201ENST00000438745 B3GLCTQ6Y288 498 aa2.63□□□□□ -1.99
HMGB3P12-201ENST00000438745 Q6ZR54 194 aa2.63□□□□□ -1.99
HMGB3P12-201ENST00000438745 Q6ZRG5 221 aa2.63□□□□□ -1.99
HMGB3P12-201ENST00000438745 TIPARPQ7Z3E1 657 aaKnown RBP2.63□□□□□ -1.99
HMGB3P12-201ENST00000438745 PARP8Q8N3A8 854 aa2.63□□□□□ -1.99
HMGB3P12-201ENST00000438745 MRPL43Q8N983 215 aaKnown RBP2.63□□□□□ -1.99
HMGB3P12-201ENST00000438745 SIDT2Q8NBJ9 832 aaKnown RBP2.63□□□□□ -1.99
HMGB3P12-201ENST00000438745 TCP11Q8WWU5 503 aa2.63□□□□□ -1.99
HMGB3P12-201ENST00000438745 FAM3CQ92520 227 aa2.63□□□□□ -1.99
HMGB3P12-201ENST00000438745 GLYATL1Q969I3 302 aa2.63□□□□□ -1.99
HMGB3P12-201ENST00000438745 DTD2Q96FN9 168 aa2.63□□□□□ -1.99
HMGB3P12-201ENST00000438745 RCHY1Q96PM5 261 aa2.63□□□□□ -1.99
HMGB3P12-201ENST00000438745 RAB40CQ96S21 281 aa2.63□□□□□ -1.99
HMGB3P12-201ENST00000438745 S1PR3Q99500 378 aa2.63□□□□□ -1.99
HMGB3P12-201ENST00000438745 TSPYL1Q9H0U9 437 aa2.63□□□□□ -1.99
HMGB3P12-201ENST00000438745 SLC26A1Q9H2B4 701 aa2.63□□□□□ -1.99
HMGB3P12-201ENST00000438745 PNNQ9H307 717 aaKnown RBP2.63□□□□□ -1.99
HMGB3P12-201ENST00000438745 TUBB1Q9H4B7 451 aa2.63□□□□□ -1.99
HMGB3P12-201ENST00000438745 HEXA-AS1Q9H8Q6 139 aa2.63□□□□□ -1.99
HMGB3P12-201ENST00000438745 MOB1AQ9H8S9 216 aa2.63□□□□□ -1.99
HMGB3P12-201ENST00000438745 SP140LQ9H930 580 aa2.63□□□□□ -1.99
HMGB3P12-201ENST00000438745 NMUR1Q9HB89 426 aa2.63□□□□□ -1.99
HMGB3P12-201ENST00000438745 SLC25A19Q9HC21 320 aa2.63□□□□□ -1.99
HMGB3P12-201ENST00000438745 COMMD8Q9NX08 183 aa2.63□□□□□ -1.99
HMGB3P12-201ENST00000438745 TAS2R16Q9NYV7 291 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms