RNA–Protein interactions for RNA: ENST00000437600.8

CUX1-206, Transcript of cut like homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CUX1, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-206ENST00000437600 OR8D4Q8NGM9 314 aa8.85□□□□□ -0.99
CUX1-206ENST00000437600 OR9Q1Q8NGQ5 310 aa8.85□□□□□ -0.99
CUX1-206ENST00000437600 TMEM255BQ8WV15 326 aa8.85□□□□□ -0.99
CUX1-206ENST00000437600 MROQ9BYG7 248 aa8.85□□□□□ -0.99
CUX1-206ENST00000437600 WDR12Q9GZL7 423 aaKnown RBP8.85□□□□□ -0.99
CUX1-206ENST00000437600 ENKD1Q9H0I2 346 aa8.85□□□□□ -0.99
CUX1-206ENST00000437600 KIR3DX1Q9H7L2 352 aa8.85□□□□□ -0.99
CUX1-206ENST00000437600 ACSS1Q9NUB1 689 aaPredicted RBP8.85□□□□□ -0.99
CUX1-206ENST00000437600 CES1P1Q9UKY3 287 aa8.85□□□□□ -0.99
CUX1-206ENST00000437600 SIT1Q9Y3P8 196 aa8.85□□□□□ -0.99
CUX1-206ENST00000437600 CSNK1G3Q9Y6M4 447 aa8.85□□□□□ -0.99
CUX1-206ENST00000437600 SDC3O75056 442 aa8.85□□□□□ -0.99
CUX1-206ENST00000437600 LGI1O95970 557 aa8.85□□□□□ -0.99
CUX1-206ENST00000437600 THY1P04216 161 aa8.85□□□□□ -0.99
CUX1-206ENST00000437600 DDX5P17844 614 aaKnown RBP8.85□□□□□ -0.99
CUX1-206ENST00000437600 TGM1P22735 817 aa8.85□□□□□ -0.99
CUX1-206ENST00000437600 LSSP48449 732 aa8.85□□□□□ -0.99
CUX1-206ENST00000437600 STARD6P59095 220 aa8.85□□□□□ -0.99
CUX1-206ENST00000437600 KIAA1024LP59773 190 aa8.85□□□□□ -0.99
CUX1-206ENST00000437600 CSNK2BP67870 215 aa8.85□□□□□ -0.99
CUX1-206ENST00000437600 TUBA1BP68363 451 aa8.85□□□□□ -0.99
CUX1-206ENST00000437600 DAB2P98082 770 aa8.85□□□□□ -0.99
CUX1-206ENST00000437600 EXOSC7Q15024 291 aaKnown RBP8.85□□□□□ -0.99
CUX1-206ENST00000437600 ZIC1Q15915 447 aa8.85□□□□□ -0.99
CUX1-206ENST00000437600 TUBA1AQ71U36 451 aa8.85□□□□□ -0.99
CUX1-206ENST00000437600 VASH1Q7L8A9 365 aaPredicted RBP8.85□□□□□ -0.99
CUX1-206ENST00000437600 TRIM69Q86WT6 500 aa8.85□□□□□ -0.99
CUX1-206ENST00000437600 GALNT12Q8IXK2 581 aa8.85□□□□□ -0.99
CUX1-206ENST00000437600 AMER2Q8N7J2 671 aa8.85□□□□□ -0.99
CUX1-206ENST00000437600 BBS1Q8NFJ9 593 aa8.85□□□□□ -0.99
CUX1-206ENST00000437600 OR4F15Q8NGB8 312 aa8.85□□□□□ -0.99
CUX1-206ENST00000437600 ADAMTS15Q8TE58 950 aa8.85□□□□□ -0.99
CUX1-206ENST00000437600 SLC37A2Q8TED4 501 aa8.85□□□□□ -0.99
CUX1-206ENST00000437600 CAPSLQ8WWF8 208 aa8.85□□□□□ -0.99
CUX1-206ENST00000437600 TBX5Q99593 518 aa8.85□□□□□ -0.99
CUX1-206ENST00000437600 ASPNQ9BXN1 380 aa8.85□□□□□ -0.99
CUX1-206ENST00000437600 BARHL1Q9BZE3 327 aa8.85□□□□□ -0.99
CUX1-206ENST00000437600 SAP130Q9H0E3 1048 aa8.85□□□□□ -0.99
CUX1-206ENST00000437600 SLC9A8Q9Y2E8 581 aa8.85□□□□□ -0.99
CUX1-206ENST00000437600 AP1M2Q9Y6Q5 423 aa8.85□□□□□ -0.99
CUX1-206ENST00000437600 ZNF780BQ9Y6R6 833 aa8.85□□□□□ -0.99
CUX1-206ENST00000437600 CACNA1EQ15878 2313 aa8.84□□□□□ -0.99
CUX1-206ENST00000437600 AGAP5A6NIR3 686 aa8.84□□□□□ -0.99
CUX1-206ENST00000437600 C19orf67A6NJJ6 358 aa8.84□□□□□ -0.99
CUX1-206ENST00000437600 CCRL2O00421 344 aa8.84□□□□□ -0.99
CUX1-206ENST00000437600 DVL2O14641 736 aa8.84□□□□□ -0.99
CUX1-206ENST00000437600 GNB5O14775 395 aa8.84□□□□□ -0.99
CUX1-206ENST00000437600 ADAP00813 363 aa8.84□□□□□ -0.99
CUX1-206ENST00000437600 CTSEP14091 401 aa8.84□□□□□ -0.99
CUX1-206ENST00000437600 DRD2P14416 443 aa8.84□□□□□ -0.99
CUX1-206ENST00000437600 GNSP15586 552 aa8.84□□□□□ -0.99
CUX1-206ENST00000437600 CPN2P22792 545 aa8.84□□□□□ -0.99
CUX1-206ENST00000437600 CMPK1P30085 196 aa8.84□□□□□ -0.99
CUX1-206ENST00000437600 SSTR4P31391 388 aa8.84□□□□□ -0.99
CUX1-206ENST00000437600 S100A5P33763 92 aa8.84□□□□□ -0.99
CUX1-206ENST00000437600 SOX18P35713 384 aa8.84□□□□□ -0.99
CUX1-206ENST00000437600 GSTM5P46439 218 aa8.84□□□□□ -0.99
CUX1-206ENST00000437600 PPP5CP53041 499 aa8.84□□□□□ -0.99
CUX1-206ENST00000437600 ERV3-1Q14264 604 aa8.84□□□□□ -0.99
CUX1-206ENST00000437600 MAPK14Q16539 360 aa8.84□□□□□ -0.99
CUX1-206ENST00000437600 SYT14P1Q58G82 188 aa8.84□□□□□ -0.99
CUX1-206ENST00000437600 FAM209AQ5JX71 171 aa8.84□□□□□ -0.99
CUX1-206ENST00000437600 C22orf42Q6IC83 251 aa8.84□□□□□ -0.99
CUX1-206ENST00000437600 USP43Q70EL4 1123 aa8.84□□□□□ -0.99
CUX1-206ENST00000437600 LYSMD2Q8IV50 215 aa8.84□□□□□ -0.99
CUX1-206ENST00000437600 NRMQ8IXM6 262 aa8.84□□□□□ -0.99
CUX1-206ENST00000437600 KLHL6Q8WZ60 621 aa8.84□□□□□ -0.99
CUX1-206ENST00000437600 SCARF2Q96GP6 870 aaPredicted RBP8.84□□□□□ -0.99
CUX1-206ENST00000437600 CTRCQ99895 268 aa8.84□□□□□ -0.99
CUX1-206ENST00000437600 RACGAP1Q9H0H5 632 aa8.84□□□□□ -0.99
CUX1-206ENST00000437600 MED20Q9H944 212 aa8.84□□□□□ -0.99
CUX1-206ENST00000437600 FBRSQ9HAH7 460 aa8.84□□□□□ -0.99
CUX1-206ENST00000437600 SLC25A19Q9HC21 320 aa8.84□□□□□ -0.99
CUX1-206ENST00000437600 FBXO8Q9NRD0 319 aa8.84□□□□□ -0.99
CUX1-206ENST00000437600 SLC13A4Q9UKG4 626 aa8.84□□□□□ -0.99
CUX1-206ENST00000437600 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.84□□□□□ -0.99
CUX1-206ENST00000437600 DSPPQ9NZW4 1301 aa8.84□□□□□ -0.99
CUX1-206ENST00000437600 PEX12O00623 359 aa8.84□□□□□ -0.99
CUX1-206ENST00000437600 PDE9AO76083 593 aa8.84□□□□□ -0.99
CUX1-206ENST00000437600 IRF3Q14653 427 aa8.84□□□□□ -0.99
CUX1-206ENST00000437600 NNATQ16517 81 aa8.84□□□□□ -0.99
CUX1-206ENST00000437600 MRM1Q6IN84 353 aaKnown RBP8.84□□□□□ -0.99
CUX1-206ENST00000437600 TYW3Q6IPR3 259 aaKnown RBP8.84□□□□□ -0.99
CUX1-206ENST00000437600 PLEKHG7Q6ZR37 379 aa8.84□□□□□ -0.99
CUX1-206ENST00000437600 GRAMD2AQ8IUY3 354 aa8.84□□□□□ -0.99
CUX1-206ENST00000437600 OR8H2Q8N162 312 aa8.84□□□□□ -0.99
CUX1-206ENST00000437600 GHDCQ8N2G8 530 aa8.84□□□□□ -0.99
CUX1-206ENST00000437600 CAMKK1Q8N5S9 505 aa8.84□□□□□ -0.99
CUX1-206ENST00000437600 MORN4Q8NDC4 146 aa8.84□□□□□ -0.99
CUX1-206ENST00000437600 TM9SF4Q92544 642 aa8.84□□□□□ -0.99
CUX1-206ENST00000437600 RSC1A1Q92681 617 aa8.84□□□□□ -0.99
CUX1-206ENST00000437600 C1GALT1C1Q96EU7 318 aa8.84□□□□□ -0.99
CUX1-206ENST00000437600 TMEM80Q96HE8 168 aa8.84□□□□□ -0.99
CUX1-206ENST00000437600 ZNF681Q96N22 645 aa8.84□□□□□ -0.99
CUX1-206ENST00000437600 TIGARQ9NQ88 270 aa8.84□□□□□ -0.99
CUX1-206ENST00000437600 GIMAP4Q9NUV9 329 aa8.84□□□□□ -0.99
CUX1-206ENST00000437600 EVA1BQ9NVM1 165 aa8.84□□□□□ -0.99
CUX1-206ENST00000437600 HRASLS2Q9NWW9 162 aa8.84□□□□□ -0.99
CUX1-206ENST00000437600 TAS2R7Q9NYW3 318 aa8.84□□□□□ -0.99
CUX1-206ENST00000437600 ANKMY1Q9P2S6 941 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms