RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 ALOXE3Q9BYJ1 711 aa10.61□□□□□ -0.71
SCN4A-201ENST00000435607 MYH3P11055 1940 aa10.61□□□□□ -0.71
SCN4A-201ENST00000435607 K7EQM0 130 aa10.61□□□□□ -0.71
SCN4A-201ENST00000435607 ZBTB22O15209 634 aa10.61□□□□□ -0.71
SCN4A-201ENST00000435607 VIPR2P41587 438 aa10.61□□□□□ -0.71
SCN4A-201ENST00000435607 SMCO4Q9NRQ5 59 aa10.61□□□□□ -0.71
SCN4A-201ENST00000435607 SPO11Q9Y5K1 396 aa10.61□□□□□ -0.71
SCN4A-201ENST00000435607 SALL3Q9BXA9 1300 aa10.61□□□□□ -0.71
SCN4A-201ENST00000435607 TRBV11-1A0A0K0K1C0 115 aa10.61□□□□□ -0.71
SCN4A-201ENST00000435607 PKLRP30613 574 aa10.61□□□□□ -0.71
SCN4A-201ENST00000435607 SOX3P41225 446 aa10.61□□□□□ -0.71
SCN4A-201ENST00000435607 OR1E2P47887 323 aa10.61□□□□□ -0.71
SCN4A-201ENST00000435607 AQP4P55087 323 aa10.61□□□□□ -0.71
SCN4A-201ENST00000435607 RAB11AP62491 216 aa10.61□□□□□ -0.71
SCN4A-201ENST00000435607 CATR1Q13166 79 aa10.61□□□□□ -0.71
SCN4A-201ENST00000435607 AGAP7PQ5VUJ5 663 aa10.61□□□□□ -0.71
SCN4A-201ENST00000435607 AGAP6Q5VW22 663 aa10.61□□□□□ -0.71
SCN4A-201ENST00000435607 SLC46A3Q7Z3Q1 461 aa10.61□□□□□ -0.71
SCN4A-201ENST00000435607 AGAP4Q96P64 663 aa10.61□□□□□ -0.71
SCN4A-201ENST00000435607 OR4K3Q96R72 315 aa10.61□□□□□ -0.71
SCN4A-201ENST00000435607 SLC25A31Q9H0C2 315 aa10.61□□□□□ -0.71
SCN4A-201ENST00000435607 KCND1Q9NSA2 647 aa10.61□□□□□ -0.71
SCN4A-201ENST00000435607 SIDT1Q9NXL6 827 aaKnown RBP10.61□□□□□ -0.71
SCN4A-201ENST00000435607 HTRA2O43464 458 aaPredicted RBP10.61□□□□□ -0.71
SCN4A-201ENST00000435607 SLC43A1O75387 559 aa10.61□□□□□ -0.71
SCN4A-201ENST00000435607 DBHP09172 617 aa10.61□□□□□ -0.71
SCN4A-201ENST00000435607 ACPPP15309 386 aa10.61□□□□□ -0.71
SCN4A-201ENST00000435607 DEFB133Q30KQ1 61 aa10.61□□□□□ -0.71
SCN4A-201ENST00000435607 GARNL3Q5VVW2 1013 aa10.61□□□□□ -0.71
SCN4A-201ENST00000435607 OR52W1Q6IF63 320 aa10.61□□□□□ -0.71
SCN4A-201ENST00000435607 RTP3Q9BQQ7 232 aa10.61□□□□□ -0.71
SCN4A-201ENST00000435607 A0A0D9SEW6 157 aa10.61□□□□□ -0.71
SCN4A-201ENST00000435607 A0A1W2PQ09 198 aa10.61□□□□□ -0.71
SCN4A-201ENST00000435607 FANCGO15287 622 aa10.61□□□□□ -0.71
SCN4A-201ENST00000435607 CRHBPP24387 322 aa10.61□□□□□ -0.71
SCN4A-201ENST00000435607 NPBWR1P48145 328 aa10.61□□□□□ -0.71
SCN4A-201ENST00000435607 UBE2G2P60604 165 aa10.61□□□□□ -0.71
SCN4A-201ENST00000435607 OR8B8Q15620 311 aa10.61□□□□□ -0.71
SCN4A-201ENST00000435607 WDR53Q7Z5U6 358 aaPredicted RBP10.61□□□□□ -0.71
SCN4A-201ENST00000435607 LRRC57Q8N9N7 239 aa10.61□□□□□ -0.71
SCN4A-201ENST00000435607 PHOSPHO2Q8TCD6 241 aa10.61□□□□□ -0.71
SCN4A-201ENST00000435607 FAM71F1Q96KD3 344 aaPredicted RBP10.61□□□□□ -0.71
SCN4A-201ENST00000435607 TSSK2Q96PF2 358 aa10.61□□□□□ -0.71
SCN4A-201ENST00000435607 PELI2Q9HAT8 420 aa10.61□□□□□ -0.71
SCN4A-201ENST00000435607 B3GAT1Q9P2W7 334 aa10.61□□□□□ -0.71
SCN4A-201ENST00000435607 C12orf71A8MTZ7 269 aa10.61□□□□□ -0.71
SCN4A-201ENST00000435607 H7C1Q1 480 aa10.61□□□□□ -0.71
SCN4A-201ENST00000435607 AHSGP02765 367 aa10.61□□□□□ -0.71
SCN4A-201ENST00000435607 EDN1P05305 212 aa10.61□□□□□ -0.71
SCN4A-201ENST00000435607 IL1RNP18510 177 aa10.61□□□□□ -0.71
SCN4A-201ENST00000435607 PBX2P40425 430 aa10.61□□□□□ -0.71
SCN4A-201ENST00000435607 METTL2BQ6P1Q9 378 aaKnown RBP10.61□□□□□ -0.71
SCN4A-201ENST00000435607 APOBEC3GQ9HC16 384 aaKnown RBP10.61□□□□□ -0.71
SCN4A-201ENST00000435607 ANKMY1Q9P2S6 941 aa10.61□□□□□ -0.71
SCN4A-201ENST00000435607 CDC14CA4D256 554 aa10.6□□□□□ -0.71
SCN4A-201ENST00000435607 VEGFCP49767 419 aa10.6□□□□□ -0.71
SCN4A-201ENST00000435607 FAM109AQ8N4B1 249 aa10.6□□□□□ -0.71
SCN4A-201ENST00000435607 CANT1Q8WVQ1 401 aa10.6□□□□□ -0.71
SCN4A-201ENST00000435607 SGK3Q96BR1 496 aa10.6□□□□□ -0.71
SCN4A-201ENST00000435607 ZNF286AQ9HBT8 521 aa10.6□□□□□ -0.71
SCN4A-201ENST00000435607 INMT-MINDY4F8WBC2 141 aa10.6□□□□□ -0.71
SCN4A-201ENST00000435607 TULP2O00295 520 aa10.6□□□□□ -0.71
SCN4A-201ENST00000435607 ONECUT3O60422 494 aaPredicted RBP10.6□□□□□ -0.71
SCN4A-201ENST00000435607 CD38P28907 300 aa10.6□□□□□ -0.71
SCN4A-201ENST00000435607 GALNT1Q10472 559 aaPredicted RBP10.6□□□□□ -0.71
SCN4A-201ENST00000435607 ZFAND4Q86XD8 727 aa10.6□□□□□ -0.71
SCN4A-201ENST00000435607 ANKLE1Q8NAG6 615 aa10.6□□□□□ -0.71
SCN4A-201ENST00000435607 IL1F10Q8WWZ1 152 aa10.6□□□□□ -0.71
SCN4A-201ENST00000435607 SLC6A5Q9Y345 797 aa10.6□□□□□ -0.71
SCN4A-201ENST00000435607 BCORL1Q5H9F3 1711 aa10.6□□□□□ -0.71
SCN4A-201ENST00000435607 PEX10O60683 326 aa10.6□□□□□ -0.71
SCN4A-201ENST00000435607 DIRAS1O95057 198 aa10.6□□□□□ -0.71
SCN4A-201ENST00000435607 GRPRP30550 384 aa10.6□□□□□ -0.71
SCN4A-201ENST00000435607 GKP32189 559 aa10.6□□□□□ -0.71
SCN4A-201ENST00000435607 APOFQ13790 326 aa10.6□□□□□ -0.71
SCN4A-201ENST00000435607 C9orf152Q5JTZ5 239 aa10.6□□□□□ -0.71
SCN4A-201ENST00000435607 DCST2Q5T1A1 773 aa10.6□□□□□ -0.71
SCN4A-201ENST00000435607 SLC22A10Q63ZE4 541 aa10.6□□□□□ -0.71
SCN4A-201ENST00000435607 MMP21Q8N119 569 aa10.6□□□□□ -0.71
SCN4A-201ENST00000435607 BBS1Q8NFJ9 593 aa10.6□□□□□ -0.71
SCN4A-201ENST00000435607 OR2T27Q8NH04 317 aa10.6□□□□□ -0.71
SCN4A-201ENST00000435607 F2RL3Q96RI0 385 aa10.6□□□□□ -0.71
SCN4A-201ENST00000435607 CMSS1Q9BQ75 279 aaKnown RBP10.6□□□□□ -0.71
SCN4A-201ENST00000435607 BEX2Q9BXY8 128 aa10.6□□□□□ -0.71
SCN4A-201ENST00000435607 BEX1Q9HBH7 125 aa10.6□□□□□ -0.71
SCN4A-201ENST00000435607 CA5BQ9Y2D0 317 aa10.6□□□□□ -0.71
SCN4A-201ENST00000435607 MYOCOSA0A1B0GUC4 107 aa10.6□□□□□ -0.71
SCN4A-201ENST00000435607 AMY2AP04746 511 aa10.6□□□□□ -0.71
SCN4A-201ENST00000435607 BDKRB2P30411 391 aa10.6□□□□□ -0.71
SCN4A-201ENST00000435607 UPP1Q16831 310 aa10.6□□□□□ -0.71
SCN4A-201ENST00000435607 ZNF767PQ75MW2 155 aa10.6□□□□□ -0.71
SCN4A-201ENST00000435607 CDRT4Q8N9R6 151 aa10.6□□□□□ -0.71
SCN4A-201ENST00000435607 STEAP2Q8NFT2 490 aa10.6□□□□□ -0.71
SCN4A-201ENST00000435607 DMBX1Q8NFW5 382 aa10.6□□□□□ -0.71
SCN4A-201ENST00000435607 OR7G2Q8NG99 324 aa10.6□□□□□ -0.71
SCN4A-201ENST00000435607 OR7G1Q8NGA0 311 aa10.6□□□□□ -0.71
SCN4A-201ENST00000435607 FOXRED1Q96CU9 486 aaPredicted RBP10.6□□□□□ -0.71
SCN4A-201ENST00000435607 NICN1Q9BSH3 213 aa10.6□□□□□ -0.71
SCN4A-201ENST00000435607 IER2Q9BTL4 223 aa10.6□□□□□ -0.71
SCN4A-201ENST00000435607 NXF5Q9H1B4 397 aaKnown RBP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms