RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 PTBP1P26599 531 aaKnown RBP eCLIP9.73□□□□□ -0.853e-6■■■■■ 30.2
CD44-210ENST00000434472 SDC2P34741 201 aa9.73□□□□□ -0.85
CD44-210ENST00000434472 TRHRP34981 398 aaPredicted RBP9.73□□□□□ -0.85
CD44-210ENST00000434472 ACTR1BP42025 376 aa9.73□□□□□ -0.85
CD44-210ENST00000434472 CASP3P42574 277 aa9.73□□□□□ -0.85
CD44-210ENST00000434472 ACTR1AP61163 376 aa9.73□□□□□ -0.85
CD44-210ENST00000434472 YPEL5P62699 121 aa9.73□□□□□ -0.85
CD44-210ENST00000434472 PPP3R1P63098 170 aa9.73□□□□□ -0.85
CD44-210ENST00000434472 EEF1A1P68104 462 aaKnown RBP9.73□□□□□ -0.85
CD44-210ENST00000434472 LSM11P83369 360 aaKnown RBP eCLIP9.73□□□□□ -0.85
CD44-210ENST00000434472 BDH1Q02338 343 aa9.73□□□□□ -0.85
CD44-210ENST00000434472 MLLT1Q03111 559 aaPredicted RBP9.73□□□□□ -0.85
CD44-210ENST00000434472 MAP4K2Q12851 820 aa9.73□□□□□ -0.85
CD44-210ENST00000434472 HNRNPA0Q13151 305 aaKnown RBP9.73□□□□□ -0.85
CD44-210ENST00000434472 RUNX2Q13950 521 aa9.73□□□□□ -0.85
CD44-210ENST00000434472 CRTC2Q53ET0 693 aaPredicted RBP9.73□□□□□ -0.85
CD44-210ENST00000434472 DDI2Q5TDH0 399 aa9.73□□□□□ -0.85
CD44-210ENST00000434472 AGAP6Q5VW22 663 aa9.73□□□□□ -0.85
CD44-210ENST00000434472 C22orf42Q6IC83 251 aa9.73□□□□□ -0.85
CD44-210ENST00000434472 FAM109BQ6ICB4 259 aaPredicted RBP9.73□□□□□ -0.85
CD44-210ENST00000434472 RPL13AP3Q6NVV1 102 aa9.73□□□□□ -0.85
CD44-210ENST00000434472 ZNF544Q6NX49 715 aa9.73□□□□□ -0.85
CD44-210ENST00000434472 FAM111BQ6SJ93 734 aa9.73□□□□□ -0.85
CD44-210ENST00000434472 FAM131AQ6UXB0 335 aa9.73□□□□□ -0.85
CD44-210ENST00000434472 ZNF836Q6ZNA1 936 aa9.73□□□□□ -0.85
CD44-210ENST00000434472 ZNF620Q6ZNG0 422 aa9.73□□□□□ -0.85
CD44-210ENST00000434472 TRIM48Q8IWZ4 208 aa9.73□□□□□ -0.85
CD44-210ENST00000434472 NRMQ8IXM6 262 aa9.73□□□□□ -0.85
CD44-210ENST00000434472 CACTIN-AS1Q8N1I8 211 aa9.73□□□□□ -0.85
CD44-210ENST00000434472 SCAIQ8N9R8 606 aa9.73□□□□□ -0.85
CD44-210ENST00000434472 SLC16A11Q8NCK7 471 aa9.73□□□□□ -0.85
CD44-210ENST00000434472 OR4Q3Q8NH05 313 aa9.73□□□□□ -0.85
CD44-210ENST00000434472 FLVCR1-AS1Q8TAF5 88 aa9.73□□□□□ -0.85
CD44-210ENST00000434472 ZCCHC10Q8TBK6 192 aa9.73□□□□□ -0.85
CD44-210ENST00000434472 BRIX1Q8TDN6 353 aaKnown RBP9.73□□□□□ -0.85
CD44-210ENST00000434472 GATAD2BQ8WXI9 593 aa9.73□□□□□ -0.85
CD44-210ENST00000434472 FGF14Q92915 247 aa9.73□□□□□ -0.85
CD44-210ENST00000434472 RERGQ96A58 199 aaPredicted RBP9.73□□□□□ -0.85
CD44-210ENST00000434472 COL26A1Q96A83 441 aa9.73□□□□□ -0.85
CD44-210ENST00000434472 ABHD8Q96I13 439 aa9.73□□□□□ -0.85
CD44-210ENST00000434472 AGAP4Q96P64 663 aa9.73□□□□□ -0.85
CD44-210ENST00000434472 STACQ99469 402 aa9.73□□□□□ -0.85
CD44-210ENST00000434472 SDF2Q99470 211 aa9.73□□□□□ -0.85
CD44-210ENST00000434472 SRRQ9GZT4 340 aa9.73□□□□□ -0.85
CD44-210ENST00000434472 MCOLN1Q9GZU1 580 aa9.73□□□□□ -0.85
CD44-210ENST00000434472 FN3KQ9H479 309 aa9.73□□□□□ -0.85
CD44-210ENST00000434472 SYNPO2LQ9H987 977 aa9.73□□□□□ -0.85
CD44-210ENST00000434472 ANKRA2Q9H9E1 313 aa9.73□□□□□ -0.85
CD44-210ENST00000434472 POLE3Q9NRF9 147 aa9.73□□□□□ -0.85
CD44-210ENST00000434472 SACM1LQ9NTJ5 587 aa9.73□□□□□ -0.85
CD44-210ENST00000434472 C14orf105Q9NVL8 296 aa9.73□□□□□ -0.85
CD44-210ENST00000434472 ASB6Q9NWX5 421 aa9.73□□□□□ -0.85
CD44-210ENST00000434472 ERVK13-1Q9NX77 482 aa9.73□□□□□ -0.85
CD44-210ENST00000434472 ACTR10Q9NZ32 417 aa9.73□□□□□ -0.85
CD44-210ENST00000434472 TMEM5Q9Y2B1 443 aa9.73□□□□□ -0.85
CD44-210ENST00000434472 CARD8Q9Y2G2 431 aa9.73□□□□□ -0.85
CD44-210ENST00000434472 YBX2Q9Y2T7 364 aaKnown RBP9.73□□□□□ -0.85
CD44-210ENST00000434472 CHST2Q9Y4C5 530 aa9.73□□□□□ -0.85
CD44-210ENST00000434472 A0A1W2PQF6 199 aa9.72□□□□□ -0.85
CD44-210ENST00000434472 POM121BA6NF01 834 aa9.72□□□□□ -0.85
CD44-210ENST00000434472 H3BQ06 376 aaPredicted RBP9.72□□□□□ -0.85
CD44-210ENST00000434472 PLD2O14939 933 aa9.72□□□□□ -0.85
CD44-210ENST00000434472 SCAMP1O15126 338 aa9.72□□□□□ -0.85
CD44-210ENST00000434472 STX11O75558 287 aa9.72□□□□□ -0.85
CD44-210ENST00000434472 EML2O95834 649 aa9.72□□□□□ -0.85
CD44-210ENST00000434472 IGHA1P01876 353 aa9.72□□□□□ -0.85
CD44-210ENST00000434472 HLA-DPB1P04440 258 aa9.72□□□□□ -0.85
CD44-210ENST00000434472 COL9A1P20849 921 aa9.72□□□□□ -0.85
CD44-210ENST00000434472 MAGP20916 626 aa9.72□□□□□ -0.85
CD44-210ENST00000434472 CFL1P23528 166 aaKnown RBP9.72□□□□□ -0.85
CD44-210ENST00000434472 AK4P27144 223 aaPredicted RBP9.72□□□□□ -0.85
CD44-210ENST00000434472 CLDN2P57739 230 aa9.72□□□□□ -0.85
CD44-210ENST00000434472 OR2B6P58173 313 aa9.72□□□□□ -0.85
CD44-210ENST00000434472 RPS25P62851 125 aaKnown RBP9.72□□□□□ -0.85
CD44-210ENST00000434472 CD300CQ08708 224 aa9.72□□□□□ -0.85
CD44-210ENST00000434472 DUSP5Q16690 384 aa9.72□□□□□ -0.85
CD44-210ENST00000434472 ZNF628Q5EBL2 1059 aa9.72□□□□□ -0.85
CD44-210ENST00000434472 EXOSC6Q5RKV6 272 aaKnown RBP9.72□□□□□ -0.85
CD44-210ENST00000434472 FHL5Q5TD97 284 aa9.72□□□□□ -0.85
CD44-210ENST00000434472 OR2G6Q5TZ20 316 aa9.72□□□□□ -0.85
CD44-210ENST00000434472 FCRL6Q6DN72 434 aa9.72□□□□□ -0.85
CD44-210ENST00000434472 METAP1DQ6UB28 335 aaPredicted RBP9.72□□□□□ -0.85
CD44-210ENST00000434472 RD3Q7Z3Z2 195 aa9.72□□□□□ -0.85
CD44-210ENST00000434472 CDK20Q8IZL9 346 aa9.72□□□□□ -0.85
CD44-210ENST00000434472 CDRT4Q8N9R6 151 aa9.72□□□□□ -0.85
CD44-210ENST00000434472 IL17RDQ8NFM7 739 aa9.72□□□□□ -0.85
CD44-210ENST00000434472 OR52L1Q8NGH7 329 aa9.72□□□□□ -0.85
CD44-210ENST00000434472 ZG16BQ96DA0 208 aa9.72□□□□□ -0.85
CD44-210ENST00000434472 ZFYVE21Q9BQ24 234 aa9.72□□□□□ -0.85
CD44-210ENST00000434472 PRR14Q9BWN1 585 aa9.72□□□□□ -0.85
CD44-210ENST00000434472 ZNF350Q9GZX5 532 aa9.72□□□□□ -0.85
CD44-210ENST00000434472 SLC6A17Q9H1V8 727 aa9.72□□□□□ -0.85
CD44-210ENST00000434472 POLMQ9NP87 494 aaPredicted RBP9.72□□□□□ -0.85
CD44-210ENST00000434472 DUSP22Q9NRW4 184 aa9.72□□□□□ -0.85
CD44-210ENST00000434472 TOR4AQ9NXH8 423 aa9.72□□□□□ -0.85
CD44-210ENST00000434472 PLEKHB1Q9UF11 243 aaPredicted RBP9.72□□□□□ -0.85
CD44-210ENST00000434472 PILRAQ9UKJ1 303 aa9.72□□□□□ -0.85
CD44-210ENST00000434472 TBC1D24Q9ULP9 559 aa9.72□□□□□ -0.85
CD44-210ENST00000434472 SLC7A7Q9UM01 511 aa9.72□□□□□ -0.85
CD44-210ENST00000434472 GPR52Q9Y2T5 361 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms