RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 SF3A2Q15428 464 aaKnown RBP3.55□□□□□ -1.84
SHPRH-205ENST00000433355 CHRNA6Q15825 494 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 SAXO2Q658L1 398 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 GLT8D1Q68CQ7 371 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 GTF2IRD2BQ6EKJ0 949 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 GPRIN1Q7Z2K8 1008 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 GTF2IRD2Q86UP8 949 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 SPPL2CQ8IUH8 684 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 CEP76Q8TAP6 659 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 ZBTB10Q96DT7 871 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 PHYHIPLQ96FC7 376 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 DHRS9Q9BPW9 319 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 NMNAT1Q9HAN9 279 aaPredicted RBP3.55□□□□□ -1.84
SHPRH-205ENST00000433355 C1GALT1Q9NS00 363 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 SLC6A14Q9UN76 642 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 FZD1Q9UP38 647 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 DOLKQ9UPQ8 538 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.55□□□□□ -1.84
SHPRH-205ENST00000433355 SCDO00767 359 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 ANKRD34CP0C6C1 535 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 RPL17P18621 184 aaKnown RBP3.55□□□□□ -1.84
SHPRH-205ENST00000433355 GABRB3P28472 473 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 S100A7P31151 101 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 CASRP41180 1078 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 ABCG1P45844 678 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 ARSDP51689 593 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 KCNQ1P51787 676 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 SLC25A1P53007 311 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 CDK3Q00526 305 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 ABRAXAS2Q15018 415 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 ESCO2Q56NI9 601 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 C9orf64Q5T6V5 341 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 METTL11BQ5VVY1 283 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 TMEM198Q66K66 360 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 TRAF7Q6Q0C0 670 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 MOB2Q70IA6 237 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 MAVSQ7Z434 540 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 MRPL41Q8IXM3 137 aaKnown RBP3.55□□□□□ -1.84
SHPRH-205ENST00000433355 ZNF480Q8WV37 535 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 RBP7Q96R05 134 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 RTP3Q9BQQ7 232 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 WDR54Q9H977 334 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 VAPAQ9P0L0 249 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 ARL5AQ9Y689 179 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 NCOA6Q14686 2063 aaPredicted RBP3.55□□□□□ -1.84
SHPRH-205ENST00000433355 ABCA12Q86UK0 2595 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 TEX51A0A1B0GUA7 166 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 TCRBV7S3A2A0A539 114 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 ANKRD33BA6NCL7 494 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 KRBOX1C9JBD0 128 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 TGOLN2O43493 480 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 CCR7P32248 378 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 CNR2P34972 360 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 STARP49675 285 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 TAS2R46P59540 309 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 TARDBPQ13148 414 aaKnown RBP eCLIP3.54□□□□□ -1.84
SHPRH-205ENST00000433355 POU4F3Q15319 338 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 PXDC1Q5TGL8 231 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 SLC48A1Q6P1K1 146 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 TMEM220Q6QAJ8 160 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 KIAA0907Q7Z7F0 614 aaPredicted RBP3.54□□□□□ -1.84
SHPRH-205ENST00000433355 MARCH5Q9NX47 278 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 PCDHGC4Q9Y5F7 938 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 PCDHGA4Q9Y5G9 962 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 UPK1BO75841 260 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 CCL5P13501 91 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 CFPP27918 469 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 DCTDP32321 178 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 NFATC4Q14934 902 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 MPPED2Q15777 294 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 FGF14Q92915 247 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 IGSF8Q969P0 613 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 COMMD9Q9P000 198 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 PCDHB14Q9Y5E9 798 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 NUBP2Q9Y5Y2 271 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 ELOA3DA6NLF2 546 aaPredicted RBP3.54□□□□□ -1.84
SHPRH-205ENST00000433355 ZNF354AO60765 605 aaPredicted RBP3.54□□□□□ -1.84
SHPRH-205ENST00000433355 POP7O75817 140 aaKnown RBP3.54□□□□□ -1.84
SHPRH-205ENST00000433355 CKMT2P17540 419 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 ALAS2P22557 587 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 IGFALSP35858 605 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 ZNF133P52736 654 aaPredicted RBP3.54□□□□□ -1.84
SHPRH-205ENST00000433355 RABGGTBP53611 331 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 CDKN2DP55273 166 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 WNT7BP56706 349 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 TNFRSF17Q02223 184 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 ELOA3BQ3SY89 546 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 LY6G5CQ5SRR4 150 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 SLC39A5Q6ZMH5 540 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 NCCRP1Q6ZVX7 275 aaPredicted RBP3.54□□□□□ -1.84
SHPRH-205ENST00000433355 MBOAT2Q6ZWT7 520 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 OR2L13Q8N349 312 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 ELOA3Q8NG57 546 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 MRGPRX1Q96LB2 322 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 KCNJ15Q99712 375 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 DOCK9Q9BZ29 2069 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 RNF13O43567 381 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 AHSA1O95433 338 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 CLDN7O95471 211 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 C1orf105O95561 183 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms