RNA–Protein interactions for RNA: ENST00000433271.6

TMEM248-205, Transcript of transmembrane protein 248, humanhuman

TSL 1 (best)

Gene TMEM248, Length 1,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-205ENST00000433271 DUS3LQ96G46 650 aaKnown RBP24.4■■□□□ 1.5
TMEM248-205ENST00000433271 PYURFQ96I23 114 aa24.4■■□□□ 1.5
TMEM248-205ENST00000433271 UGT2B28Q9BY64 529 aa24.4■■□□□ 1.5
TMEM248-205ENST00000433271 ATP13A2Q9NQ11 1180 aa24.4■■□□□ 1.5
TMEM248-205ENST00000433271 IFT52Q9Y366 437 aa24.4■■□□□ 1.5
TMEM248-205ENST00000433271 NPFFR2Q9Y5X5 522 aa24.4■■□□□ 1.5
TMEM248-205ENST00000433271 ZNF891A8MT65 544 aaPredicted RBP24.39■■□□□ 1.5
TMEM248-205ENST00000433271 TMEM229AB2RXF0 380 aa24.39■■□□□ 1.5
TMEM248-205ENST00000433271 OR2J2O76002 312 aa24.39■■□□□ 1.5
TMEM248-205ENST00000433271 NADKO95544 446 aaPredicted RBP24.39■■□□□ 1.5
TMEM248-205ENST00000433271 AIMP2Q13155 320 aaKnown RBP24.39■■□□□ 1.5
TMEM248-205ENST00000433271 ATP1A1-AS1Q5TC04 95 aa24.39■■□□□ 1.5
TMEM248-205ENST00000433271 JMJD6Q6NYC1 403 aaPredicted RBP24.39■■□□□ 1.5
TMEM248-205ENST00000433271 ADGRG5Q8IZF4 528 aa24.39■■□□□ 1.5
TMEM248-205ENST00000433271 SLC5A8Q8N695 610 aa24.39■■□□□ 1.5
TMEM248-205ENST00000433271 SLC15A4Q8N697 577 aa24.39■■□□□ 1.5
TMEM248-205ENST00000433271 FAM86B1Q8N7N1 296 aa24.39■■□□□ 1.5
TMEM248-205ENST00000433271 SMYD1Q8NB12 490 aa24.39■■□□□ 1.5
TMEM248-205ENST00000433271 OR52P1PQ8NH57 321 aa24.39■■□□□ 1.5
TMEM248-205ENST00000433271 SLC22A8Q8TCC7 542 aa24.39■■□□□ 1.5
TMEM248-205ENST00000433271 LZICQ8WZA0 190 aa24.39■■□□□ 1.5
TMEM248-205ENST00000433271 DOHHQ9BU89 302 aa24.39■■□□□ 1.5
TMEM248-205ENST00000433271 CACYBPQ9HB71 228 aaKnown RBP24.39■■□□□ 1.5
TMEM248-205ENST00000433271 ANAPC2Q9UJX6 822 aa24.39■■□□□ 1.5
TMEM248-205ENST00000433271 PCDHGA10Q9Y5H3 936 aa24.39■■□□□ 1.5
TMEM248-205ENST00000433271 V9GYQ6 96 aa24.39■■□□□ 1.5
TMEM248-205ENST00000433271 TSPAN2O60636 221 aa24.39■■□□□ 1.49
TMEM248-205ENST00000433271 PABPC4LP0CB38 370 aaKnown RBP24.39■■□□□ 1.49
TMEM248-205ENST00000433271 NAGAP17050 411 aa24.39■■□□□ 1.49
TMEM248-205ENST00000433271 RPS4Y1P22090 263 aaKnown RBP24.39■■□□□ 1.49
TMEM248-205ENST00000433271 IL12BP29460 328 aa24.39■■□□□ 1.49
TMEM248-205ENST00000433271 PNLIPRP2P54317 469 aa24.39■■□□□ 1.49
TMEM248-205ENST00000433271 DUSP7Q16829 419 aa24.39■■□□□ 1.49
TMEM248-205ENST00000433271 RPS19BP1Q86WX3 136 aaKnown RBP24.39■■□□□ 1.49
TMEM248-205ENST00000433271 TPD52L3Q96J77 140 aa24.39■■□□□ 1.49
TMEM248-205ENST00000433271 CCNL2Q96S94 520 aaPredicted RBP24.39■■□□□ 1.49
TMEM248-205ENST00000433271 ADOQ96SZ5 270 aa24.39■■□□□ 1.49
TMEM248-205ENST00000433271 RSPO3Q9BXY4 272 aaPredicted RBP24.39■■□□□ 1.49
TMEM248-205ENST00000433271 HOXD1Q9GZZ0 328 aa24.39■■□□□ 1.49
TMEM248-205ENST00000433271 TRIM45Q9H8W5 580 aaPredicted RBP24.39■■□□□ 1.49
TMEM248-205ENST00000433271 CCM2LQ9NUG4 571 aaPredicted RBP24.39■■□□□ 1.49
TMEM248-205ENST00000433271 RYDENQ9NUL5 291 aaKnown RBP24.39■■□□□ 1.49
TMEM248-205ENST00000433271 KCNE5Q9UJ90 142 aa24.39■■□□□ 1.49
TMEM248-205ENST00000433271 ANGPTL2Q9UKU9 493 aa24.39■■□□□ 1.49
TMEM248-205ENST00000433271 ZNF232Q9UNY5 417 aa24.39■■□□□ 1.49
TMEM248-205ENST00000433271 NPIPB9F8W1W9 429 aa24.38■■□□□ 1.49
TMEM248-205ENST00000433271 ZNF354AO60765 605 aaPredicted RBP24.38■■□□□ 1.49
TMEM248-205ENST00000433271 FKBP6O75344 327 aa24.38■■□□□ 1.49
TMEM248-205ENST00000433271 UGT2B17O75795 530 aa24.38■■□□□ 1.49
TMEM248-205ENST00000433271 DBIP07108 87 aaKnown RBP24.38■■□□□ 1.49
TMEM248-205ENST00000433271 SLC7A1P30825 629 aa24.38■■□□□ 1.49
TMEM248-205ENST00000433271 HOXD11P31277 338 aaPredicted RBP24.38■■□□□ 1.49
TMEM248-205ENST00000433271 ZNF311Q5JNZ3 666 aa24.38■■□□□ 1.49
TMEM248-205ENST00000433271 ZFP1Q6P2D0 407 aa24.38■■□□□ 1.49
TMEM248-205ENST00000433271 AAGABQ6PD74 315 aa24.38■■□□□ 1.49
TMEM248-205ENST00000433271 HMGN2P46Q86SG4 172 aa24.38■■□□□ 1.49
TMEM248-205ENST00000433271 TMEM102Q8N9M5 508 aaPredicted RBP24.38■■□□□ 1.49
TMEM248-205ENST00000433271 CLEC1AQ8NC01 280 aa24.38■■□□□ 1.49
TMEM248-205ENST00000433271 OR10Q1Q8NGQ4 319 aa24.38■■□□□ 1.49
TMEM248-205ENST00000433271 PYDC1Q8WXC3 89 aa24.38■■□□□ 1.49
TMEM248-205ENST00000433271 CCDC86Q9H6F5 360 aaKnown RBP24.38■■□□□ 1.49
TMEM248-205ENST00000433271 BAG5Q9UL15 447 aa24.38■■□□□ 1.49
TMEM248-205ENST00000433271 AURKCQ9UQB9 309 aa24.38■■□□□ 1.49
TMEM248-205ENST00000433271 YARS2Q9Y2Z4 477 aaKnown RBP24.38■■□□□ 1.49
TMEM248-205ENST00000433271 OR6C70A6NIJ9 312 aa24.37■■□□□ 1.49
TMEM248-205ENST00000433271 MGRN1O60291 552 aa24.37■■□□□ 1.49
TMEM248-205ENST00000433271 ABCB7O75027 752 aa24.37■■□□□ 1.49
TMEM248-205ENST00000433271 ITGA10O75578 1167 aa24.37■■□□□ 1.49
TMEM248-205ENST00000433271 PPM1BO75688 479 aa24.37■■□□□ 1.49
TMEM248-205ENST00000433271 THBS1P07996 1170 aa24.37■■□□□ 1.49
TMEM248-205ENST00000433271 PRKAR1AP10644 381 aa24.37■■□□□ 1.49
TMEM248-205ENST00000433271 IL7RP16871 459 aa24.37■■□□□ 1.49
TMEM248-205ENST00000433271 CD247P20963 164 aa24.37■■□□□ 1.49
TMEM248-205ENST00000433271 KCNJ5P48544 419 aa24.37■■□□□ 1.49
TMEM248-205ENST00000433271 ATP12AP54707 1039 aa24.37■■□□□ 1.49
TMEM248-205ENST00000433271 RRADP55042 308 aa24.37■■□□□ 1.49
TMEM248-205ENST00000433271 ZNF141Q15928 474 aa24.37■■□□□ 1.49
TMEM248-205ENST00000433271 FAM98BQ52LJ0 330 aaKnown RBP24.37■■□□□ 1.49
TMEM248-205ENST00000433271 FKBP9P1Q75LS8 142 aa24.37■■□□□ 1.49
TMEM248-205ENST00000433271 VTCN1Q7Z7D3 282 aa24.37■■□□□ 1.49
TMEM248-205ENST00000433271 OIT3Q8WWZ8 545 aa24.37■■□□□ 1.49
TMEM248-205ENST00000433271 SLCO4A1Q96BD0 722 aa24.37■■□□□ 1.49
TMEM248-205ENST00000433271 THOC3Q96J01 351 aaKnown RBP24.37■■□□□ 1.49
TMEM248-205ENST00000433271 HSH2DQ96JZ2 352 aa24.37■■□□□ 1.49
TMEM248-205ENST00000433271 RASL10BQ96S79 203 aa24.37■■□□□ 1.49
TMEM248-205ENST00000433271 SEPHS2Q99611 448 aa24.37■■□□□ 1.49
TMEM248-205ENST00000433271 CDCP1Q9H5V8 836 aa24.37■■□□□ 1.49
TMEM248-205ENST00000433271 MAGIXQ9H6Y5 334 aa24.37■■□□□ 1.49
TMEM248-205ENST00000433271 S100A14Q9HCY8 104 aa24.37■■□□□ 1.49
TMEM248-205ENST00000433271 UBQLN4Q9NRR5 601 aa24.37■■□□□ 1.49
TMEM248-205ENST00000433271 NPIPA5A0A0B4J1W7 369 aa24.36■■□□□ 1.49
TMEM248-205ENST00000433271 NPIPA7E9PJI5 369 aa24.36■■□□□ 1.49
TMEM248-205ENST00000433271 NPIPA8P0DM63 369 aa24.36■■□□□ 1.49
TMEM248-205ENST00000433271 HOXB6P17509 224 aaKnown RBP24.36■■□□□ 1.49
TMEM248-205ENST00000433271 PRKAR1BP31321 381 aa24.36■■□□□ 1.49
TMEM248-205ENST00000433271 DCTP40126 519 aa24.36■■□□□ 1.49
TMEM248-205ENST00000433271 MLF1P58340 268 aa24.36■■□□□ 1.49
TMEM248-205ENST00000433271 LARS2Q15031 903 aaKnown RBP24.36■■□□□ 1.49
TMEM248-205ENST00000433271 MAPK14Q16539 360 aa24.36■■□□□ 1.49
TMEM248-205ENST00000433271 VRK2Q86Y07 508 aa24.36■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms