RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 GPM6BQ13491 265 aa2.34□□□□□ -2.03
CLK1-204ENST00000432425 BTG3Q14201 252 aaPredicted RBP2.34□□□□□ -2.03
CLK1-204ENST00000432425 UNC50Q53HI1 259 aa2.34□□□□□ -2.03
CLK1-204ENST00000432425 DDI2Q5TDH0 399 aa2.34□□□□□ -2.03
CLK1-204ENST00000432425 HHATQ5VTY9 493 aa2.34□□□□□ -2.03
CLK1-204ENST00000432425 TTC19Q6DKK2 380 aaPredicted RBP2.34□□□□□ -2.03
CLK1-204ENST00000432425 C2orf66Q6UXQ4 117 aa2.34□□□□□ -2.03
CLK1-204ENST00000432425 TAF8Q7Z7C8 310 aa2.34□□□□□ -2.03
CLK1-204ENST00000432425 KLHDC8AQ8IYD2 350 aa2.34□□□□□ -2.03
CLK1-204ENST00000432425 UBQLNLQ8IYU4 475 aa2.34□□□□□ -2.03
CLK1-204ENST00000432425 BBS5Q8N3I7 341 aa2.34□□□□□ -2.03
CLK1-204ENST00000432425 ZCCHC7Q8N3Z6 543 aaKnown RBP2.34□□□□□ -2.03
CLK1-204ENST00000432425 CHDHQ8NE62 594 aaPredicted RBP2.34□□□□□ -2.03
CLK1-204ENST00000432425 OR9A1PQ8NGU1 263 aa2.34□□□□□ -2.03
CLK1-204ENST00000432425 OR4F5Q8NH21 305 aa2.34□□□□□ -2.03
CLK1-204ENST00000432425 OR8K3Q8NH51 312 aa2.34□□□□□ -2.03
CLK1-204ENST00000432425 THRSPQ92748 146 aa2.34□□□□□ -2.03
CLK1-204ENST00000432425 EFHD2Q96C19 240 aaPredicted RBP2.34□□□□□ -2.03
CLK1-204ENST00000432425 NUS1Q96E22 293 aa2.34□□□□□ -2.03
CLK1-204ENST00000432425 MAGEB18Q96M61 343 aa2.34□□□□□ -2.03
CLK1-204ENST00000432425 CCT8L2Q96SF2 557 aa2.34□□□□□ -2.03
CLK1-204ENST00000432425 THUMPD2Q9BTF0 503 aaKnown RBP2.34□□□□□ -2.03
CLK1-204ENST00000432425 CARD6Q9BX69 1037 aa2.34□□□□□ -2.03
CLK1-204ENST00000432425 RAB33BQ9H082 229 aa2.34□□□□□ -2.03
CLK1-204ENST00000432425 TSPYL1Q9H0U9 437 aa2.34□□□□□ -2.03
CLK1-204ENST00000432425 RHBGQ9H310 441 aa2.34□□□□□ -2.03
CLK1-204ENST00000432425 RNF41Q9H4P4 317 aaPredicted RBP2.34□□□□□ -2.03
CLK1-204ENST00000432425 HAUS4Q9H6D7 363 aa2.34□□□□□ -2.03
CLK1-204ENST00000432425 DCTPP1Q9H773 170 aa2.34□□□□□ -2.03
CLK1-204ENST00000432425 NGBQ9NPG2 151 aa2.34□□□□□ -2.03
CLK1-204ENST00000432425 TIGARQ9NQ88 270 aa2.34□□□□□ -2.03
CLK1-204ENST00000432425 FAM114A2Q9NRY5 505 aa2.34□□□□□ -2.03
CLK1-204ENST00000432425 AGPAT3Q9NRZ7 376 aa2.34□□□□□ -2.03
CLK1-204ENST00000432425 DNAJC17Q9NVM6 304 aaKnown RBP2.34□□□□□ -2.03
CLK1-204ENST00000432425 IL20Q9NYY1 176 aa2.34□□□□□ -2.03
CLK1-204ENST00000432425 CHRNA9Q9UGM1 479 aa2.34□□□□□ -2.03
CLK1-204ENST00000432425 MLXQ9UH92 298 aa2.34□□□□□ -2.03
CLK1-204ENST00000432425 TRMT6Q9UJA5 497 aaKnown RBP2.34□□□□□ -2.03
CLK1-204ENST00000432425 STK38LQ9Y2H1 464 aa2.34□□□□□ -2.03
CLK1-204ENST00000432425 IGHV3OR16-12A0A075B7B8 117 aa2.34□□□□□ -2.04
CLK1-204ENST00000432425 TRABD2BA6NFA1 517 aa2.34□□□□□ -2.04
CLK1-204ENST00000432425 EFCAB7A8K855 629 aa2.34□□□□□ -2.04
CLK1-204ENST00000432425 DNALI1O14645 258 aaPredicted RBP2.34□□□□□ -2.04
CLK1-204ENST00000432425 LYPD3O95274 346 aa2.34□□□□□ -2.04
CLK1-204ENST00000432425 AK1P00568 194 aa2.34□□□□□ -2.04
CLK1-204ENST00000432425 SNRPCP09234 159 aaKnown RBP2.34□□□□□ -2.04
CLK1-204ENST00000432425 VCLP18206 1134 aa2.34□□□□□ -2.04
CLK1-204ENST00000432425 SFNP31947 248 aa2.34□□□□□ -2.04
CLK1-204ENST00000432425 BMI1P35226 326 aa2.34□□□□□ -2.04
CLK1-204ENST00000432425 SERPINB6P35237 376 aa2.34□□□□□ -2.04
CLK1-204ENST00000432425 LONP1P36776 959 aaKnown RBP2.34□□□□□ -2.04
CLK1-204ENST00000432425 CCT6AP40227 531 aaKnown RBP2.34□□□□□ -2.04
CLK1-204ENST00000432425 ARHGDIAP52565 204 aa2.34□□□□□ -2.04
CLK1-204ENST00000432425 NDST1P52848 882 aa2.34□□□□□ -2.04
CLK1-204ENST00000432425 MFAP2P55001 183 aa2.34□□□□□ -2.04
CLK1-204ENST00000432425 NOP14P78316 857 aaKnown RBP2.34□□□□□ -2.04
CLK1-204ENST00000432425 GFPT1Q06210 699 aaPredicted RBP2.34□□□□□ -2.04
CLK1-204ENST00000432425 EIF4EBP2Q13542 120 aaPredicted RBP2.34□□□□□ -2.04
CLK1-204ENST00000432425 CUL1Q13616 776 aa2.34□□□□□ -2.04
CLK1-204ENST00000432425 COTL1Q14019 142 aa2.34□□□□□ -2.04
CLK1-204ENST00000432425 GNA13Q14344 377 aa2.34□□□□□ -2.04
CLK1-204ENST00000432425 SLC10A1Q14973 349 aa2.34□□□□□ -2.04
CLK1-204ENST00000432425 KIAA0040Q15053 153 aa2.34□□□□□ -2.04
CLK1-204ENST00000432425 P2RY14Q15391 338 aa2.34□□□□□ -2.04
CLK1-204ENST00000432425 FUT11Q495W5 492 aa2.34□□□□□ -2.04
CLK1-204ENST00000432425 CES3Q6UWW8 571 aa2.34□□□□□ -2.04
CLK1-204ENST00000432425 GCNT7Q6ZNI0 430 aa2.34□□□□□ -2.04
CLK1-204ENST00000432425 RNF10Q8N5U6 811 aaKnown RBP2.34□□□□□ -2.04
CLK1-204ENST00000432425 ZNF565Q8N9K5 539 aa2.34□□□□□ -2.04
CLK1-204ENST00000432425 TRPV3Q8NET8 790 aa2.34□□□□□ -2.04
CLK1-204ENST00000432425 FBXO25Q8TCJ0 367 aa2.34□□□□□ -2.04
CLK1-204ENST00000432425 GGHQ92820 318 aa2.34□□□□□ -2.04
CLK1-204ENST00000432425 PNPLA2Q96AD5 504 aa2.34□□□□□ -2.04
CLK1-204ENST00000432425 TMEM186Q96B77 213 aa2.34□□□□□ -2.04
CLK1-204ENST00000432425 C5orf30Q96GV9 206 aa2.34□□□□□ -2.04
CLK1-204ENST00000432425 IFT74Q96LB3 600 aa2.34□□□□□ -2.04
CLK1-204ENST00000432425 KCNK16Q96T55 309 aa2.34□□□□□ -2.04
CLK1-204ENST00000432425 S1PR3Q99500 378 aa2.34□□□□□ -2.04
CLK1-204ENST00000432425 AGPAT1Q99943 283 aa2.34□□□□□ -2.04
CLK1-204ENST00000432425 CCDC77Q9BR77 488 aa2.34□□□□□ -2.04
CLK1-204ENST00000432425 ZSCAN5AQ9BUG6 496 aa2.34□□□□□ -2.04
CLK1-204ENST00000432425 NTMT1Q9BV86 223 aa2.34□□□□□ -2.04
CLK1-204ENST00000432425 GPR61Q9BZJ8 451 aa2.34□□□□□ -2.04
CLK1-204ENST00000432425 GDF3Q9NR23 364 aa2.34□□□□□ -2.04
CLK1-204ENST00000432425 IMPAD1Q9NX62 359 aa2.34□□□□□ -2.04
CLK1-204ENST00000432425 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP2.34□□□□□ -2.04
CLK1-204ENST00000432425 CIDEBQ9UHD4 219 aa2.34□□□□□ -2.04
CLK1-204ENST00000432425 ANGPTL2Q9UKU9 493 aa2.34□□□□□ -2.04
CLK1-204ENST00000432425 SNX6Q9UNH7 406 aa2.34□□□□□ -2.04
CLK1-204ENST00000432425 STX8Q9UNK0 236 aa2.34□□□□□ -2.04
CLK1-204ENST00000432425 STRAPQ9Y3F4 350 aaKnown RBP2.34□□□□□ -2.04
CLK1-204ENST00000432425 COMMD3-BMI1R4GMX3 469 aa2.34□□□□□ -2.04
CLK1-204ENST00000432425 EVC2Q86UK5 1308 aa2.34□□□□□ -2.04
CLK1-204ENST00000432425 FAM149AA5PLN7 773 aa2.33□□□□□ -2.04
CLK1-204ENST00000432425 MFSD2BA6NFX1 497 aa2.33□□□□□ -2.04
CLK1-204ENST00000432425 FAM47DPA6NHR8 397 aa2.33□□□□□ -2.04
CLK1-204ENST00000432425 F8WDY8 70 aa2.33□□□□□ -2.04
CLK1-204ENST00000432425 ANGPT2O15123 496 aa2.33□□□□□ -2.04
CLK1-204ENST00000432425 TTI1O43156 1089 aa2.33□□□□□ -2.04
CLK1-204ENST00000432425 RRP8O43159 456 aaKnown RBP2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms