RNA–Protein interactions for RNA: ENST00000431889.6

SMARCE1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2 BASIC

Gene SMARCE1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-205ENST00000431889 DIO3P55073 304 aa12.85□□□□□ -0.35
SMARCE1-205ENST00000431889 PKNOX1P55347 436 aa12.85□□□□□ -0.35
SMARCE1-205ENST00000431889 NKX6-1P78426 367 aaPredicted RBP12.85□□□□□ -0.35
SMARCE1-205ENST00000431889 PON3Q15166 354 aa12.85□□□□□ -0.35
SMARCE1-205ENST00000431889 FAM71E1Q6IPT2 247 aa12.85□□□□□ -0.35
SMARCE1-205ENST00000431889 CAMKMTQ7Z624 323 aa12.85□□□□□ -0.35
SMARCE1-205ENST00000431889 SLC22A9Q8IVM8 553 aa12.85□□□□□ -0.35
SMARCE1-205ENST00000431889 ZNF610Q8N9Z0 462 aa12.85□□□□□ -0.35
SMARCE1-205ENST00000431889 MZB1Q8WU39 189 aa12.85□□□□□ -0.35
SMARCE1-205ENST00000431889 RNF138Q8WVD3 245 aa12.85□□□□□ -0.35
SMARCE1-205ENST00000431889 EDARQ9UNE0 448 aa12.85□□□□□ -0.35
SMARCE1-205ENST00000431889 EIF3LQ9Y262 564 aaKnown RBP12.85□□□□□ -0.35
SMARCE1-205ENST00000431889 VDAC3Q9Y277 283 aa12.85□□□□□ -0.35
SMARCE1-205ENST00000431889 TESMINQ9Y4I5 508 aa12.85□□□□□ -0.35
SMARCE1-205ENST00000431889 NAV3Q8IVL0 2385 aa12.85□□□□□ -0.35
SMARCE1-205ENST00000431889 SMAD7O15105 426 aaKnown RBP12.84□□□□□ -0.35
SMARCE1-205ENST00000431889 HCRTR2O43614 444 aa12.84□□□□□ -0.35
SMARCE1-205ENST00000431889 UTS2O95399 124 aa12.84□□□□□ -0.35
SMARCE1-205ENST00000431889 GSTA1P08263 222 aa12.84□□□□□ -0.35
SMARCE1-205ENST00000431889 ADSLP30566 484 aaPredicted RBP12.84□□□□□ -0.35
SMARCE1-205ENST00000431889 CCKARP32238 428 aa12.84□□□□□ -0.35
SMARCE1-205ENST00000431889 SLC6A8P48029 635 aa12.84□□□□□ -0.35
SMARCE1-205ENST00000431889 GRAMD1BQ3KR37 738 aa12.84□□□□□ -0.35
SMARCE1-205ENST00000431889 ALKBH2Q6NS38 261 aa12.84□□□□□ -0.35
SMARCE1-205ENST00000431889 NOXRED1Q6NXP6 359 aa12.84□□□□□ -0.35
SMARCE1-205ENST00000431889 CCDC63Q8NA47 563 aa12.84□□□□□ -0.35
SMARCE1-205ENST00000431889 MNS1Q8NEH6 495 aa12.84□□□□□ -0.35
SMARCE1-205ENST00000431889 ELP4Q96EB1 424 aa12.84□□□□□ -0.35
SMARCE1-205ENST00000431889 AMDHD1Q96NU7 426 aa12.84□□□□□ -0.35
SMARCE1-205ENST00000431889 UCN2Q96RP3 112 aa12.84□□□□□ -0.35
SMARCE1-205ENST00000431889 MED18Q9BUE0 208 aa12.84□□□□□ -0.35
SMARCE1-205ENST00000431889 KLHL4Q9C0H6 718 aa12.84□□□□□ -0.35
SMARCE1-205ENST00000431889 PIGMQ9H3S5 423 aa12.84□□□□□ -0.35
SMARCE1-205ENST00000431889 NEUROD4Q9HD90 331 aa12.84□□□□□ -0.35
SMARCE1-205ENST00000431889 NDRG3Q9UGV2 375 aa12.84□□□□□ -0.35
SMARCE1-205ENST00000431889 DEFB108AA8MXU0 73 aa12.83□□□□□ -0.36
SMARCE1-205ENST00000431889 COQ9O75208 318 aa12.83□□□□□ -0.36
SMARCE1-205ENST00000431889 SEC22BO75396 215 aa12.83□□□□□ -0.36
SMARCE1-205ENST00000431889 AQP8O94778 261 aa12.83□□□□□ -0.36
SMARCE1-205ENST00000431889 ABHD2P08910 425 aa12.83□□□□□ -0.36
SMARCE1-205ENST00000431889 PEPDP12955 493 aa12.83□□□□□ -0.36
SMARCE1-205ENST00000431889 POU2F1P14859 743 aa12.83□□□□□ -0.36
SMARCE1-205ENST00000431889 NTSP30990 170 aa12.83□□□□□ -0.36
SMARCE1-205ENST00000431889 LTBQ06643 244 aa12.83□□□□□ -0.36
SMARCE1-205ENST00000431889 DECR1Q16698 335 aa12.83□□□□□ -0.36
SMARCE1-205ENST00000431889 ZNF385BQ569K4 471 aa12.83□□□□□ -0.36
SMARCE1-205ENST00000431889 GALNT18Q6P9A2 607 aa12.83□□□□□ -0.36
SMARCE1-205ENST00000431889 FIGNL1Q6PIW4 674 aa12.83□□□□□ -0.36
SMARCE1-205ENST00000431889 ZYG11AQ6WRX3 759 aa12.83□□□□□ -0.36
SMARCE1-205ENST00000431889 ZAR1Q86SH2 424 aa12.83□□□□□ -0.36
SMARCE1-205ENST00000431889 CXorf67Q86X51 503 aaPredicted RBP12.83□□□□□ -0.36
SMARCE1-205ENST00000431889 MEIOBQ8N635 442 aa12.83□□□□□ -0.36
SMARCE1-205ENST00000431889 C1GALT1C1Q96EU7 318 aa12.83□□□□□ -0.36
SMARCE1-205ENST00000431889 PERPQ96FX8 193 aa12.83□□□□□ -0.36
SMARCE1-205ENST00000431889 ZFP3Q96NJ6 502 aa12.83□□□□□ -0.36
SMARCE1-205ENST00000431889 TMEM185BQ9H7F4 350 aa12.83□□□□□ -0.36
SMARCE1-205ENST00000431889 ZNF395Q9H8N7 513 aaPredicted RBP12.83□□□□□ -0.36
SMARCE1-205ENST00000431889 FBXO34Q9NWN3 711 aa12.83□□□□□ -0.36
SMARCE1-205ENST00000431889 PSMC3IPQ9P2W1 217 aaPredicted RBP12.83□□□□□ -0.36
SMARCE1-205ENST00000431889 BAIAP2L1Q9UHR4 511 aa12.83□□□□□ -0.36
SMARCE1-205ENST00000431889 C19orf53Q9UNZ5 99 aaPredicted RBP12.83□□□□□ -0.36
SMARCE1-205ENST00000431889 NTN1O95631 604 aa12.82□□□□□ -0.36
SMARCE1-205ENST00000431889 ANGPTL1O95841 491 aa12.82□□□□□ -0.36
SMARCE1-205ENST00000431889 PROCP04070 461 aa12.82□□□□□ -0.36
SMARCE1-205ENST00000431889 GPC1P35052 558 aa12.82□□□□□ -0.36
SMARCE1-205ENST00000431889 GLE1Q53GS7 698 aaKnown RBP12.82□□□□□ -0.36
SMARCE1-205ENST00000431889 CFAP157Q5JU67 520 aa12.82□□□□□ -0.36
SMARCE1-205ENST00000431889 TRMT10CQ7L0Y3 403 aaKnown RBP12.82□□□□□ -0.36
SMARCE1-205ENST00000431889 LSRQ86X29 649 aaPredicted RBP12.82□□□□□ -0.36
SMARCE1-205ENST00000431889 SAMD14Q8IZD0 417 aaPredicted RBP12.82□□□□□ -0.36
SMARCE1-205ENST00000431889 OR2L13Q8N349 312 aa12.82□□□□□ -0.36
SMARCE1-205ENST00000431889 OR2T11Q8NH01 316 aa12.82□□□□□ -0.36
SMARCE1-205ENST00000431889 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.82□□□□□ -0.36
SMARCE1-205ENST00000431889 GPR151Q8TDV0 419 aa12.82□□□□□ -0.36
SMARCE1-205ENST00000431889 NUDT8Q8WV74 236 aa12.82□□□□□ -0.36
SMARCE1-205ENST00000431889 SH3YL1Q96HL8 342 aaPredicted RBP12.82□□□□□ -0.36
SMARCE1-205ENST00000431889 TSSK3Q96PN8 268 aa12.82□□□□□ -0.36
SMARCE1-205ENST00000431889 TBL1XR1Q9BZK7 514 aa12.82□□□□□ -0.36
SMARCE1-205ENST00000431889 ACBD3Q9H3P7 528 aa12.82□□□□□ -0.36
SMARCE1-205ENST00000431889 Q9N2J8 555 aa12.82□□□□□ -0.36
SMARCE1-205ENST00000431889 MYNNQ9NPC7 610 aa12.82□□□□□ -0.36
SMARCE1-205ENST00000431889 GIMAP2Q9UG22 337 aa12.82□□□□□ -0.36
SMARCE1-205ENST00000431889 EIF1AYO14602 144 aaKnown RBP12.81□□□□□ -0.36
SMARCE1-205ENST00000431889 MSTNO14793 375 aa12.81□□□□□ -0.36
SMARCE1-205ENST00000431889 CTIFO43310 598 aaKnown RBP12.81□□□□□ -0.36
SMARCE1-205ENST00000431889 IL33O95760 270 aa12.81□□□□□ -0.36
SMARCE1-205ENST00000431889 UGT2B10P36537 528 aa12.81□□□□□ -0.36
SMARCE1-205ENST00000431889 CD79BP40259 229 aa12.81□□□□□ -0.36
SMARCE1-205ENST00000431889 EIF1AXP47813 144 aaKnown RBP12.81□□□□□ -0.36
SMARCE1-205ENST00000431889 SGCBQ16585 318 aa12.81□□□□□ -0.36
SMARCE1-205ENST00000431889 CYP27C1Q4G0S4 372 aa12.81□□□□□ -0.36
SMARCE1-205ENST00000431889 Q5PR19 223 aa12.81□□□□□ -0.36
SMARCE1-205ENST00000431889 CCNJQ5T5M9 372 aa12.81□□□□□ -0.36
SMARCE1-205ENST00000431889 CLEC9AQ6UXN8 241 aa12.81□□□□□ -0.36
SMARCE1-205ENST00000431889 FRMD7Q6ZUT3 714 aa12.81□□□□□ -0.36
SMARCE1-205ENST00000431889 IFT20Q8IY31 132 aa12.81□□□□□ -0.36
SMARCE1-205ENST00000431889 C4orf33Q8N1A6 199 aa12.81□□□□□ -0.36
SMARCE1-205ENST00000431889 OR4C3Q8NH37 302 aa12.81□□□□□ -0.36
SMARCE1-205ENST00000431889 ERP27Q96DN0 273 aa12.81□□□□□ -0.36
SMARCE1-205ENST00000431889 C16orf58Q96GQ5 468 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms