RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 DPH7Q9BTV6 452 aa5.06□□□□□ -1.6
PTPN4-203ENST00000430976 TMPRSS13Q9BYE2 586 aa5.06□□□□□ -1.6
PTPN4-203ENST00000430976 ARV1Q9H2C2 271 aa5.06□□□□□ -1.6
PTPN4-203ENST00000430976 ACOXLQ9NUZ1 547 aa5.06□□□□□ -1.6
PTPN4-203ENST00000430976 TMEM161AQ9NX61 479 aa5.06□□□□□ -1.6
PTPN4-203ENST00000430976 SERTAD3Q9UJW9 196 aa5.06□□□□□ -1.6
PTPN4-203ENST00000430976 UBE2J1Q9Y385 318 aaPredicted RBP5.06□□□□□ -1.6
PTPN4-203ENST00000430976 ACTL7BQ9Y614 415 aa5.06□□□□□ -1.6
PTPN4-203ENST00000430976 TMEM218A2RU14 115 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 C5orf58C9J3I9 102 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 EPHB6O15197 1021 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 GALR2O43603 387 aaPredicted RBP5.05□□□□□ -1.6
PTPN4-203ENST00000430976 SNAP91O60641 907 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 UGT2B11O75310 529 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 CILPO75339 1184 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 ECI2O75521 394 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 CELF2O95319 508 aaKnown RBP5.05□□□□□ -1.6
PTPN4-203ENST00000430976 MT-CYBP00156 380 aaPredicted RBP5.05□□□□□ -1.6
PTPN4-203ENST00000430976 FGBP02675 491 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 GPIP06744 558 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 SYPP08247 313 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 CMPK1P30085 196 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 UQCRFS1P47985 274 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 RAB28P51157 221 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 ERVFRD-1P60508 538 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 IDI1Q13907 227 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 HAGHQ16775 308 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 FAM45BPQ6NSW5 357 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 ZNF613Q6PF04 617 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 CRTC3Q6UUV7 619 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 LYSMD3Q7Z3D4 306 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 TMED4Q7Z7H5 227 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 GID4Q8IVV7 300 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 OR6V1Q8N148 313 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 OR5D13Q8NGL4 314 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 LYPD6BQ8NI32 183 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 FBXO25Q8TCJ0 367 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 MARVELD3Q96A59 401 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 ASB9Q96DX5 294 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 FCRL2Q96LA5 508 aaPredicted RBP5.05□□□□□ -1.6
PTPN4-203ENST00000430976 MAGEB18Q96M61 343 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 SLC22A12Q96S37 553 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 CPNE1Q99829 537 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 ALG12Q9BV10 488 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 BARHL1Q9BZE3 327 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 WWTR1Q9GZV5 400 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 FN3KRPQ9HA64 309 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 ISYNA1Q9NPH2 558 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 LHX9Q9NQ69 397 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 TUBD1Q9UJT1 453 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 KLF2Q9Y5W3 355 aaPredicted RBP5.05□□□□□ -1.6
PTPN4-203ENST00000430976 LYVE1Q9Y5Y7 322 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 ANKRD50Q9ULJ7 1429 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 NID2Q14112 1375 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 TRAV25A0A0B4J276 109 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 PRSS37A4D1T9 235 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 H0YGN5 161 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 H3BMQ9 156 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 M0QZ24 198 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 XPNPEP2O43895 674 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 ENTPD6O75354 484 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 PDYNP01213 254 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 EPHX1P07099 455 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 UCHL1P09936 223 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 IMPDH1P20839 514 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 TBXA2RP21731 343 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 UQCRC2P22695 453 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 GIPRP48546 466 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 RRAS2P62070 204 aaPredicted RBP5.05□□□□□ -1.6
PTPN4-203ENST00000430976 PPP3R1P63098 170 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 ST3GAL1Q11201 340 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 FFAR4Q5NUL3 377 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 ACOT7LQ6ZUV0 252 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 CPEB2Q7Z5Q1 589 aaKnown RBP5.05□□□□□ -1.6
PTPN4-203ENST00000430976 FAM222BQ8WU58 562 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 TMEM234Q8WY98 164 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 HAS1Q92839 578 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 TMEM203Q969S6 136 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 FAM162AQ96A26 154 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 TLCD1Q96CP7 247 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 GPA33Q99795 319 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 CPEB1Q9BZB8 566 aaKnown RBP5.05□□□□□ -1.6
PTPN4-203ENST00000430976 CHST5Q9GZS9 411 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 RBM38Q9H0Z9 239 aaKnown RBP5.05□□□□□ -1.6
PTPN4-203ENST00000430976 TUBB1Q9H4B7 451 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 ADAP2Q9NPF8 381 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 IL17RBQ9NRM6 502 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 ZDHHC7Q9NXF8 308 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 BTG4Q9NY30 223 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 NFS1Q9Y697 457 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 ABCC12Q96J65 1359 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 ZNF541Q9H0D2 1346 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 A0A1B0GUH1 482 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 PLRG1O43660 514 aaKnown RBP5.05□□□□□ -1.6
PTPN4-203ENST00000430976 UGT2B17O75795 530 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 KLF8O95600 359 aaPredicted RBP5.05□□□□□ -1.6
PTPN4-203ENST00000430976 GLB1P16278 677 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 CNR1P21554 472 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 EPHA2P29317 976 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 SRP9P49458 86 aaKnown RBP5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms