RNA–Protein interactions for RNA: ENST00000430158.5

USP40-205, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 1,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-205ENST00000430158 FAM13CQ8NE31 585 aa11.38□□□□□ -0.59
USP40-205ENST00000430158 OR2M7Q8NG81 312 aa11.38□□□□□ -0.59
USP40-205ENST00000430158 OR5M3Q8NGP4 307 aa11.38□□□□□ -0.59
USP40-205ENST00000430158 ADAMTS15Q8TE58 950 aa11.38□□□□□ -0.59
USP40-205ENST00000430158 RAB8BQ92930 207 aa11.38□□□□□ -0.59
USP40-205ENST00000430158 RMND5BQ96G75 393 aaPredicted RBP11.38□□□□□ -0.59
USP40-205ENST00000430158 SACM1LQ9NTJ5 587 aa11.38□□□□□ -0.59
USP40-205ENST00000430158 FAF1Q9UNN5 650 aaPredicted RBP11.38□□□□□ -0.59
USP40-205ENST00000430158 KLF13Q9Y2Y9 288 aaPredicted RBP11.38□□□□□ -0.59
USP40-205ENST00000430158 NDUFAF1Q9Y375 327 aa11.38□□□□□ -0.59
USP40-205ENST00000430158 OR10H1Q9Y4A9 318 aa11.38□□□□□ -0.59
USP40-205ENST00000430158 LOC100653049A0A140TA62 436 aa11.37□□□□□ -0.59
USP40-205ENST00000430158 LRRC3CA6NJW4 275 aa11.37□□□□□ -0.59
USP40-205ENST00000430158 DUXAA6NLW8 204 aa11.37□□□□□ -0.59
USP40-205ENST00000430158 G3V3Y1 287 aa11.37□□□□□ -0.59
USP40-205ENST00000430158 CLIC1O00299 241 aa11.37□□□□□ -0.59
USP40-205ENST00000430158 TP53I11O14683 189 aa11.37□□□□□ -0.59
USP40-205ENST00000430158 ICOSLGO75144 302 aa11.37□□□□□ -0.59
USP40-205ENST00000430158 TNFRSF21O75509 655 aa11.37□□□□□ -0.59
USP40-205ENST00000430158 KRT34O76011 436 aa11.37□□□□□ -0.59
USP40-205ENST00000430158 KRT75O95678 551 aa11.37□□□□□ -0.59
USP40-205ENST00000430158 NGFRP08138 427 aa11.37□□□□□ -0.59
USP40-205ENST00000430158 OR12D1P0DN82 309 aa11.37□□□□□ -0.59
USP40-205ENST00000430158 GPX2P18283 190 aa11.37□□□□□ -0.59
USP40-205ENST00000430158 MST1P26927 711 aa11.37□□□□□ -0.59
USP40-205ENST00000430158 LCN1P31025 176 aa11.37□□□□□ -0.59
USP40-205ENST00000430158 DNASE1L1P49184 302 aa11.37□□□□□ -0.59
USP40-205ENST00000430158 MEOX1P50221 254 aa11.37□□□□□ -0.59
USP40-205ENST00000430158 MLLT10P55197 1068 aa11.37□□□□□ -0.59
USP40-205ENST00000430158 GPR85P60893 370 aa11.37□□□□□ -0.59
USP40-205ENST00000430158 POU6F2P78424 691 aaPredicted RBP11.37□□□□□ -0.59
USP40-205ENST00000430158 TXNL4AP83876 142 aaKnown RBP11.37□□□□□ -0.59
USP40-205ENST00000430158 PMP22Q01453 160 aa11.37□□□□□ -0.59
USP40-205ENST00000430158 SNTA1Q13424 505 aa11.37□□□□□ -0.59
USP40-205ENST00000430158 EFR3AQ14156 821 aa11.37□□□□□ -0.59
USP40-205ENST00000430158 ARHGAP11BQ3KRB8 267 aa11.37□□□□□ -0.59
USP40-205ENST00000430158 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.37□□□□□ -0.59
USP40-205ENST00000430158 CCNJQ5T5M9 372 aa11.37□□□□□ -0.59
USP40-205ENST00000430158 FIGNL1Q6PIW4 674 aa11.37□□□□□ -0.59
USP40-205ENST00000430158 OLIG3Q7RTU3 272 aa11.37□□□□□ -0.59
USP40-205ENST00000430158 COX18Q8N8Q8 333 aa11.37□□□□□ -0.59
USP40-205ENST00000430158 OR52N2Q8NGI0 321 aa11.37□□□□□ -0.59
USP40-205ENST00000430158 OR4C3Q8NH37 302 aa11.37□□□□□ -0.59
USP40-205ENST00000430158 DNAJB8Q8NHS0 232 aa11.37□□□□□ -0.59
USP40-205ENST00000430158 JADE3Q92613 823 aa11.37□□□□□ -0.59
USP40-205ENST00000430158 TMEM125Q96AQ2 219 aa11.37□□□□□ -0.59
USP40-205ENST00000430158 FAM173AQ9BQD7 235 aa11.37□□□□□ -0.59
USP40-205ENST00000430158 CPPED1Q9BRF8 314 aaPredicted RBP11.37□□□□□ -0.59
USP40-205ENST00000430158 SAP130Q9H0E3 1048 aa11.37□□□□□ -0.59
USP40-205ENST00000430158 IL1RL2Q9HB29 575 aa11.37□□□□□ -0.59
USP40-205ENST00000430158 TUBA8Q9NY65 449 aaPredicted RBP11.37□□□□□ -0.59
USP40-205ENST00000430158 KCNE5Q9UJ90 142 aa11.37□□□□□ -0.59
USP40-205ENST00000430158 DIDO1Q9BTC0 2240 aaKnown RBP11.37□□□□□ -0.59
USP40-205ENST00000430158 USP9XQ93008 2570 aaPredicted RBP11.37□□□□□ -0.59
USP40-205ENST00000430158 MYO7BQ6PIF6 2116 aa11.36□□□□□ -0.59
USP40-205ENST00000430158 C17orf51A8MQB3 221 aa11.36□□□□□ -0.59
USP40-205ENST00000430158 BBIP1A8MTZ0 92 aa11.36□□□□□ -0.59
USP40-205ENST00000430158 KLRC4-KLRK1H3BQV0 150 aa11.36□□□□□ -0.59
USP40-205ENST00000430158 FCMRO60667 390 aa11.36□□□□□ -0.59
USP40-205ENST00000430158 KCNH1O95259 989 aa11.36□□□□□ -0.59
USP40-205ENST00000430158 RASAL1O95294 804 aa11.36□□□□□ -0.59
USP40-205ENST00000430158 UTS2O95399 124 aa11.36□□□□□ -0.59
USP40-205ENST00000430158 P04436 131 aa11.36□□□□□ -0.59
USP40-205ENST00000430158 COX4I1P13073 169 aa11.36□□□□□ -0.59
USP40-205ENST00000430158 CHI3L1P36222 383 aaPredicted RBP11.36□□□□□ -0.59
USP40-205ENST00000430158 GZMMP51124 257 aa11.36□□□□□ -0.59
USP40-205ENST00000430158 TDGF1P3P51864 188 aa11.36□□□□□ -0.59
USP40-205ENST00000430158 SELPLGQ14242 412 aa11.36□□□□□ -0.59
USP40-205ENST00000430158 RGNQ15493 299 aa11.36□□□□□ -0.59
USP40-205ENST00000430158 ADRM1Q16186 407 aa11.36□□□□□ -0.59
USP40-205ENST00000430158 GRAMD1BQ3KR37 738 aa11.36□□□□□ -0.59
USP40-205ENST00000430158 DCST2Q5T1A1 773 aa11.36□□□□□ -0.59
USP40-205ENST00000430158 PRAMEF20Q5VT98 475 aa11.36□□□□□ -0.59
USP40-205ENST00000430158 REP15Q6BDI9 236 aa11.36□□□□□ -0.59
USP40-205ENST00000430158 SLC30A6Q6NXT4 461 aa11.36□□□□□ -0.59
USP40-205ENST00000430158 DHDDSQ86SQ9 333 aa11.36□□□□□ -0.59
USP40-205ENST00000430158 GALNT10Q86SR1 603 aa11.36□□□□□ -0.59
USP40-205ENST00000430158 POU5F2Q8N7G0 328 aa11.36□□□□□ -0.59
USP40-205ENST00000430158 WDSUB1Q8N9V3 476 aa11.36□□□□□ -0.59
USP40-205ENST00000430158 POGLUT1Q8NBL1 392 aa11.36□□□□□ -0.59
USP40-205ENST00000430158 RP9Q8TA86 221 aaKnown RBP11.36□□□□□ -0.59
USP40-205ENST00000430158 PNPT1Q8TCS8 783 aaKnown RBP11.36□□□□□ -0.59
USP40-205ENST00000430158 FAR1Q8WVX9 515 aa11.36□□□□□ -0.59
USP40-205ENST00000430158 ANKRD27Q96NW4 1050 aa11.36□□□□□ -0.59
USP40-205ENST00000430158 CGREF1Q99674 301 aa11.36□□□□□ -0.59
USP40-205ENST00000430158 SLX1AQ9BQ83 275 aa11.36□□□□□ -0.59
USP40-205ENST00000430158 ZNF350Q9GZX5 532 aa11.36□□□□□ -0.59
USP40-205ENST00000430158 GALNT9Q9HCQ5 603 aa11.36□□□□□ -0.59
USP40-205ENST00000430158 ASF1BQ9NVP2 202 aa11.36□□□□□ -0.59
USP40-205ENST00000430158 CENPVL1A0A0U1RR11 272 aa11.35□□□□□ -0.59
USP40-205ENST00000430158 PRAMEF25A6NGN4 478 aa11.35□□□□□ -0.59
USP40-205ENST00000430158 TTLL8A6PVC2 850 aa11.35□□□□□ -0.59
USP40-205ENST00000430158 ALG1L2C9J202 215 aa11.35□□□□□ -0.59
USP40-205ENST00000430158 ANGPT2O15123 496 aa11.35□□□□□ -0.59
USP40-205ENST00000430158 SNX4O95219 450 aa11.35□□□□□ -0.59
USP40-205ENST00000430158 ANP32DO95626 131 aa11.35□□□□□ -0.59
USP40-205ENST00000430158 AGR2O95994 175 aa11.35□□□□□ -0.59
USP40-205ENST00000430158 AK1P00568 194 aa11.35□□□□□ -0.59
USP40-205ENST00000430158 TFPTP0C1Z6 253 aa11.35□□□□□ -0.59
USP40-205ENST00000430158 RFPL3SP0C7P2 107 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms