RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 ADAD1Q96M93 576 aaKnown RBP12.13□□□□□ -0.47
PTCH1-207ENST00000429896 DPH2Q9BQC3 489 aaPredicted RBP12.13□□□□□ -0.47
PTCH1-207ENST00000429896 FBXL3Q9UKT7 428 aa12.13□□□□□ -0.47
PTCH1-207ENST00000429896 SLITRK5O94991 958 aa12.13□□□□□ -0.47
PTCH1-207ENST00000429896 S100A10P60903 97 aa12.13□□□□□ -0.47
PTCH1-207ENST00000429896 BOLLQ8N9W6 283 aaKnown RBP12.13□□□□□ -0.47
PTCH1-207ENST00000429896 C1orf216Q8TAB5 229 aa12.13□□□□□ -0.47
PTCH1-207ENST00000429896 IL4I1Q96RQ9 567 aa12.13□□□□□ -0.47
PTCH1-207ENST00000429896 SGPP1Q9BX95 441 aa12.13□□□□□ -0.47
PTCH1-207ENST00000429896 METTL8Q9H825 291 aaKnown RBP12.13□□□□□ -0.47
PTCH1-207ENST00000429896 ERVMER34-1Q9H9K5 563 aa12.13□□□□□ -0.47
PTCH1-207ENST00000429896 DIRAS1O95057 198 aa12.13□□□□□ -0.47
PTCH1-207ENST00000429896 DNAJA1P31689 397 aaKnown RBP12.13□□□□□ -0.47
PTCH1-207ENST00000429896 CCL11P51671 97 aa12.13□□□□□ -0.47
PTCH1-207ENST00000429896 TRAM2Q15035 370 aa12.13□□□□□ -0.47
PTCH1-207ENST00000429896 SF3B4Q15427 424 aaKnown RBP eCLIP12.13□□□□□ -0.47
PTCH1-207ENST00000429896 TCEAL3Q969E4 200 aa12.13□□□□□ -0.47
PTCH1-207ENST00000429896 INPP5KQ9BT40 448 aa12.13□□□□□ -0.47
PTCH1-207ENST00000429896 NUP50Q9UKX7 468 aa12.13□□□□□ -0.47
PTCH1-207ENST00000429896 EFCAB9A8MZ26 197 aa12.13□□□□□ -0.47
PTCH1-207ENST00000429896 PPM1DO15297 605 aa12.13□□□□□ -0.47
PTCH1-207ENST00000429896 GALR2O43603 387 aaPredicted RBP12.13□□□□□ -0.47
PTCH1-207ENST00000429896 PSMA1P25786 263 aaKnown RBP12.13□□□□□ -0.47
PTCH1-207ENST00000429896 MERTKQ12866 999 aa12.13□□□□□ -0.47
PTCH1-207ENST00000429896 ARFRP1Q13795 201 aa12.13□□□□□ -0.47
PTCH1-207ENST00000429896 LGI4Q8N135 537 aa12.13□□□□□ -0.47
PTCH1-207ENST00000429896 CRELD1Q96HD1 420 aa12.13□□□□□ -0.47
PTCH1-207ENST00000429896 UTP23Q9BRU9 249 aaKnown RBP12.13□□□□□ -0.47
PTCH1-207ENST00000429896 LYRM4Q9HD34 91 aa12.13□□□□□ -0.47
PTCH1-207ENST00000429896 RHCGQ9UBD6 479 aa12.13□□□□□ -0.47
PTCH1-207ENST00000429896 ZNF69Q9UC07 566 aa12.13□□□□□ -0.47
PTCH1-207ENST00000429896 MPZL2O60487 215 aa12.12□□□□□ -0.47
PTCH1-207ENST00000429896 RCBTB2O95199 551 aa12.12□□□□□ -0.47
PTCH1-207ENST00000429896 SLC6A12P48065 614 aa12.12□□□□□ -0.47
PTCH1-207ENST00000429896 SNU13P55769 128 aaKnown RBP12.12□□□□□ -0.47
PTCH1-207ENST00000429896 ADAM8P78325 824 aa12.12□□□□□ -0.47
PTCH1-207ENST00000429896 KCNC4Q03721 635 aa12.12□□□□□ -0.47
PTCH1-207ENST00000429896 PLET1Q6UQ28 207 aa12.12□□□□□ -0.47
PTCH1-207ENST00000429896 HACD2Q6Y1H2 254 aa12.12□□□□□ -0.47
PTCH1-207ENST00000429896 NAGSQ8N159 534 aa12.12□□□□□ -0.47
PTCH1-207ENST00000429896 CREB3L4Q8TEY5 395 aa12.12□□□□□ -0.47
PTCH1-207ENST00000429896 CBLCQ9ULV8 474 aa12.12□□□□□ -0.47
PTCH1-207ENST00000429896 BLOC1S5-TXNDC5H3BN57 136 aa12.12□□□□□ -0.47
PTCH1-207ENST00000429896 TSPAN4O14817 238 aa12.12□□□□□ -0.47
PTCH1-207ENST00000429896 DSCR3O14972 297 aa12.12□□□□□ -0.47
PTCH1-207ENST00000429896 AIREO43918 545 aa12.12□□□□□ -0.47
PTCH1-207ENST00000429896 CELA2BP08218 269 aaPredicted RBP12.12□□□□□ -0.47
PTCH1-207ENST00000429896 EXT1Q16394 746 aa12.12□□□□□ -0.47
PTCH1-207ENST00000429896 CARM1Q86X55 608 aa12.12□□□□□ -0.47
PTCH1-207ENST00000429896 TMEM19Q96HH6 336 aa12.12□□□□□ -0.47
PTCH1-207ENST00000429896 OR1F2PQ96R84 312 aa12.12□□□□□ -0.47
PTCH1-207ENST00000429896 ZNF559Q9BR84 538 aa12.12□□□□□ -0.47
PTCH1-207ENST00000429896 TMEM5Q9Y2B1 443 aa12.12□□□□□ -0.47
PTCH1-207ENST00000429896 TRIM64BA6NI03 449 aa12.12□□□□□ -0.47
PTCH1-207ENST00000429896 GJE1A6NN92 205 aa12.12□□□□□ -0.47
PTCH1-207ENST00000429896 CTNSO60931 367 aa12.12□□□□□ -0.47
PTCH1-207ENST00000429896 ETFAP13804 333 aa12.12□□□□□ -0.47
PTCH1-207ENST00000429896 LIM2P55344 173 aa12.12□□□□□ -0.47
PTCH1-207ENST00000429896 OR2B6P58173 313 aa12.12□□□□□ -0.47
PTCH1-207ENST00000429896 RGNQ15493 299 aa12.12□□□□□ -0.47
PTCH1-207ENST00000429896 UBQLNLQ8IYU4 475 aa12.12□□□□□ -0.47
PTCH1-207ENST00000429896 ZNF639Q9UID6 485 aa12.12□□□□□ -0.47
PTCH1-207ENST00000429896 ZNF221Q9UK13 617 aa12.12□□□□□ -0.47
PTCH1-207ENST00000429896 ANTXRLA6NF34 631 aa12.12□□□□□ -0.47
PTCH1-207ENST00000429896 VSTM2BA6NLU5 285 aa12.12□□□□□ -0.47
PTCH1-207ENST00000429896 PLD2O14939 933 aa12.12□□□□□ -0.47
PTCH1-207ENST00000429896 NPTX1Q15818 432 aa12.12□□□□□ -0.47
PTCH1-207ENST00000429896 CRB2Q5IJ48 1285 aa12.12□□□□□ -0.47
PTCH1-207ENST00000429896 OGFRL1Q5TC84 451 aaPredicted RBP12.12□□□□□ -0.47
PTCH1-207ENST00000429896 OR2T5Q6IEZ7 315 aa12.12□□□□□ -0.47
PTCH1-207ENST00000429896 LAPTM4BQ86VI4 370 aa12.12□□□□□ -0.47
PTCH1-207ENST00000429896 ZNF101Q8IZC7 436 aa12.12□□□□□ -0.47
PTCH1-207ENST00000429896 OR2T29Q8NH02 315 aa12.12□□□□□ -0.47
PTCH1-207ENST00000429896 EID2BQ96D98 161 aa12.12□□□□□ -0.47
PTCH1-207ENST00000429896 C3orf30Q96M34 536 aa12.12□□□□□ -0.47
PTCH1-207ENST00000429896 NAA11Q9BSU3 229 aaPredicted RBP12.12□□□□□ -0.47
PTCH1-207ENST00000429896 ACSS1Q9NUB1 689 aaPredicted RBP12.12□□□□□ -0.47
PTCH1-207ENST00000429896 ZNF226Q9NYT6 803 aa12.12□□□□□ -0.47
PTCH1-207ENST00000429896 KDM4BO94953 1096 aa12.12□□□□□ -0.47
PTCH1-207ENST00000429896 OR3A3P47888 321 aa12.12□□□□□ -0.47
PTCH1-207ENST00000429896 OR3A2P47893 321 aa12.12□□□□□ -0.47
PTCH1-207ENST00000429896 SSR4P51571 173 aa12.12□□□□□ -0.47
PTCH1-207ENST00000429896 PAPD4Q6PIY7 484 aaKnown RBP12.12□□□□□ -0.47
PTCH1-207ENST00000429896 ZNF782Q6ZMW2 699 aaPredicted RBP12.12□□□□□ -0.47
PTCH1-207ENST00000429896 GPAT4Q86UL3 456 aa12.12□□□□□ -0.47
PTCH1-207ENST00000429896 ZNF619Q8N2I2 560 aa12.12□□□□□ -0.47
PTCH1-207ENST00000429896 ZNF285Q96NJ3 590 aa12.12□□□□□ -0.47
PTCH1-207ENST00000429896 A0A1W2PPL8 197 aa12.11□□□□□ -0.47
PTCH1-207ENST00000429896 GATBO75879 557 aaKnown RBP12.11□□□□□ -0.47
PTCH1-207ENST00000429896 CTBP2P56545 445 aa12.11□□□□□ -0.47
PTCH1-207ENST00000429896 PRAMEF17Q5VTA0 474 aa12.11□□□□□ -0.47
PTCH1-207ENST00000429896 TESCQ96BS2 214 aa12.11□□□□□ -0.47
PTCH1-207ENST00000429896 ZNF578Q96N58 590 aaPredicted RBP12.11□□□□□ -0.47
PTCH1-207ENST00000429896 IP6K3Q96PC2 410 aa12.11□□□□□ -0.47
PTCH1-207ENST00000429896 DOHHQ9BU89 302 aa12.11□□□□□ -0.47
PTCH1-207ENST00000429896 TEX10Q9NXF1 929 aaPredicted RBP12.11□□□□□ -0.47
PTCH1-207ENST00000429896 LOC105369274A0A096LPK9 316 aa12.11□□□□□ -0.47
PTCH1-207ENST00000429896 LOC102723532A0A0G2JNH3 316 aa12.11□□□□□ -0.47
PTCH1-207ENST00000429896 LRIT2A6NDA9 550 aa12.11□□□□□ -0.47
PTCH1-207ENST00000429896 J3QLW9 94 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms