RNA–Protein interactions for RNA: ENST00000429490.5

SGMS1-203, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 3,634 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-203ENST00000429490 LTB4RQ15722 352 aa12.91□□□□□ -0.34
SGMS1-203ENST00000429490 NNATQ16517 81 aa12.91□□□□□ -0.34
SGMS1-203ENST00000429490 DEFB134Q4QY38 66 aa12.91□□□□□ -0.34
SGMS1-203ENST00000429490 HENMT1Q5T8I9 393 aaKnown RBP12.91□□□□□ -0.34
SGMS1-203ENST00000429490 C18orf63Q68DL7 685 aa12.91□□□□□ -0.34
SGMS1-203ENST00000429490 AMER3Q8N944 861 aa12.91□□□□□ -0.34
SGMS1-203ENST00000429490 FBXO15Q8NCQ5 510 aaPredicted RBP12.91□□□□□ -0.34
SGMS1-203ENST00000429490 COQ8AQ8NI60 647 aa12.91□□□□□ -0.34
SGMS1-203ENST00000429490 TRMT2BQ96GJ1 504 aaKnown RBP12.91□□□□□ -0.34
SGMS1-203ENST00000429490 CCDC3Q9BQI4 270 aa12.91□□□□□ -0.34
SGMS1-203ENST00000429490 HCN3Q9P1Z3 774 aa12.91□□□□□ -0.34
SGMS1-203ENST00000429490 EXO1Q9UQ84 846 aaKnown RBP12.91□□□□□ -0.34
SGMS1-203ENST00000429490 FXYD6-FXYD2A0A087WZ82 144 aa12.91□□□□□ -0.34
SGMS1-203ENST00000429490 OR10H2O60403 315 aa12.91□□□□□ -0.34
SGMS1-203ENST00000429490 RFPL3O75679 317 aa12.91□□□□□ -0.34
SGMS1-203ENST00000429490 ABLIM3O94929 683 aa12.91□□□□□ -0.34
SGMS1-203ENST00000429490 SNRPBP14678 240 aaKnown RBP12.91□□□□□ -0.34
SGMS1-203ENST00000429490 C4BPBP20851 252 aa12.91□□□□□ -0.34
SGMS1-203ENST00000429490 CTNNB1P35222 781 aa12.91□□□□□ -0.34
SGMS1-203ENST00000429490 AKR1D1P51857 326 aa12.91□□□□□ -0.34
SGMS1-203ENST00000429490 P2RX3P56373 397 aa12.91□□□□□ -0.34
SGMS1-203ENST00000429490 DEFB103AP81534 67 aa12.91□□□□□ -0.34
SGMS1-203ENST00000429490 OC90Q02509 493 aaPredicted RBP12.91□□□□□ -0.34
SGMS1-203ENST00000429490 TP53I3Q53FA7 332 aa12.91□□□□□ -0.34
SGMS1-203ENST00000429490 PRSS45Q7RTY3 260 aa12.91□□□□□ -0.34
SGMS1-203ENST00000429490 LINC00471Q8N535 108 aa12.91□□□□□ -0.34
SGMS1-203ENST00000429490 TNFAIP8L1Q8WVP5 186 aa12.91□□□□□ -0.34
SGMS1-203ENST00000429490 LCN9Q8WX39 176 aa12.91□□□□□ -0.34
SGMS1-203ENST00000429490 MAP6Q96JE9 813 aa12.91□□□□□ -0.34
SGMS1-203ENST00000429490 FXYD6Q9H0Q3 95 aa12.91□□□□□ -0.34
SGMS1-203ENST00000429490 OR51J1Q9H342 316 aa12.91□□□□□ -0.34
SGMS1-203ENST00000429490 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.91□□□□□ -0.34
SGMS1-203ENST00000429490 STOML2Q9UJZ1 356 aa12.91□□□□□ -0.34
SGMS1-203ENST00000429490 PLA2G10O15496 165 aa12.9□□□□□ -0.34
SGMS1-203ENST00000429490 PIP5K1CO60331 668 aa12.9□□□□□ -0.34
SGMS1-203ENST00000429490 RGS9O75916 674 aaPredicted RBP12.9□□□□□ -0.34
SGMS1-203ENST00000429490 HLA-DQA2P01906 255 aa12.9□□□□□ -0.34
SGMS1-203ENST00000429490 H2AFB2P0C5Z0 115 aa12.9□□□□□ -0.34
SGMS1-203ENST00000429490 PEPDP12955 493 aa12.9□□□□□ -0.34
SGMS1-203ENST00000429490 EDNRAP25101 427 aa12.9□□□□□ -0.34
SGMS1-203ENST00000429490 OR10A3P58181 314 aa12.9□□□□□ -0.34
SGMS1-203ENST00000429490 ERMAPQ96PL5 475 aaPredicted RBP12.9□□□□□ -0.34
SGMS1-203ENST00000429490 TMEM27Q9HBJ8 222 aa12.9□□□□□ -0.34
SGMS1-203ENST00000429490 PRKAG2Q9UGJ0 569 aa12.9□□□□□ -0.34
SGMS1-203ENST00000429490 CACNG2Q9Y698 323 aa12.9□□□□□ -0.34
SGMS1-203ENST00000429490 SPACA6W5XKT8 324 aa12.9□□□□□ -0.34
SGMS1-203ENST00000429490 ANTXRLA6NF34 631 aa12.9□□□□□ -0.34
SGMS1-203ENST00000429490 SLC19A2O60779 497 aa12.9□□□□□ -0.34
SGMS1-203ENST00000429490 OR7A10O76100 309 aa12.9□□□□□ -0.34
SGMS1-203ENST00000429490 RHOP08100 348 aa12.9□□□□□ -0.34
SGMS1-203ENST00000429490 HK1P19367 917 aa12.9□□□□□ -0.34
SGMS1-203ENST00000429490 ACVR2AP27037 513 aa12.9□□□□□ -0.34
SGMS1-203ENST00000429490 LCN1P31025 176 aa12.9□□□□□ -0.34
SGMS1-203ENST00000429490 GPR176Q14439 515 aa12.9□□□□□ -0.34
SGMS1-203ENST00000429490 CDKN3Q16667 212 aa12.9□□□□□ -0.34
SGMS1-203ENST00000429490 C3orf38Q5JPI3 329 aa12.9□□□□□ -0.34
SGMS1-203ENST00000429490 ENTPD8Q5MY95 495 aa12.9□□□□□ -0.34
SGMS1-203ENST00000429490 MPP7Q5T2T1 576 aa12.9□□□□□ -0.34
SGMS1-203ENST00000429490 PXDC1Q5TGL8 231 aa12.9□□□□□ -0.34
SGMS1-203ENST00000429490 LYPD4Q6UWN0 246 aa12.9□□□□□ -0.34
SGMS1-203ENST00000429490 COMMD7Q86VX2 200 aa12.9□□□□□ -0.34
SGMS1-203ENST00000429490 SLC44A3Q8N4M1 653 aa12.9□□□□□ -0.34
SGMS1-203ENST00000429490 OR14C36Q8NHC7 312 aa12.9□□□□□ -0.34
SGMS1-203ENST00000429490 ZFAND1Q8TCF1 268 aa12.9□□□□□ -0.34
SGMS1-203ENST00000429490 ZMYND19Q96E35 227 aaPredicted RBP12.9□□□□□ -0.34
SGMS1-203ENST00000429490 SLC41A3Q96GZ6 507 aa12.9□□□□□ -0.34
SGMS1-203ENST00000429490 LMLNQ96KR4 655 aa12.9□□□□□ -0.34
SGMS1-203ENST00000429490 WSB2Q9NYS7 404 aaPredicted RBP12.9□□□□□ -0.34
SGMS1-203ENST00000429490 PLEKHB1Q9UF11 243 aaPredicted RBP12.9□□□□□ -0.34
SGMS1-203ENST00000429490 SLC23A1Q9UHI7 598 aa12.9□□□□□ -0.34
SGMS1-203ENST00000429490 TBC1D3DA0A087WVF3 549 aa12.9□□□□□ -0.34
SGMS1-203ENST00000429490 TBC1D3IA0A087WXS9 549 aa12.9□□□□□ -0.34
SGMS1-203ENST00000429490 TBC1D3EA0A087X179 549 aa12.9□□□□□ -0.34
SGMS1-203ENST00000429490 TBC1D3KA0A087X1G2 549 aa12.9□□□□□ -0.34
SGMS1-203ENST00000429490 TBC1D3FA6NER0 549 aaPredicted RBP12.9□□□□□ -0.34
SGMS1-203ENST00000429490 TBC1D3LB9A6J9 549 aa12.9□□□□□ -0.34
SGMS1-203ENST00000429490 FMO6PO60774 539 aa12.9□□□□□ -0.34
SGMS1-203ENST00000429490 SOX30O94993 753 aa12.9□□□□□ -0.34
SGMS1-203ENST00000429490 TBC1D3HP0C7X1 549 aa12.9□□□□□ -0.34
SGMS1-203ENST00000429490 MVDP53602 400 aa12.9□□□□□ -0.34
SGMS1-203ENST00000429490 HSF2Q03933 536 aa12.9□□□□□ -0.34
SGMS1-203ENST00000429490 HES5Q5TA89 166 aa12.9□□□□□ -0.34
SGMS1-203ENST00000429490 TBC1D3GQ6DHY5 549 aa12.9□□□□□ -0.34
SGMS1-203ENST00000429490 TBC1D3CQ6IPX1 549 aa12.9□□□□□ -0.34
SGMS1-203ENST00000429490 TBC1D3Q8IZP1 549 aaPredicted RBP12.9□□□□□ -0.34
SGMS1-203ENST00000429490 GJD3Q8N144 294 aa12.9□□□□□ -0.34
SGMS1-203ENST00000429490 FAM26EQ8N5C1 309 aa12.9□□□□□ -0.34
SGMS1-203ENST00000429490 ADAMTS19Q8TE59 1207 aa12.9□□□□□ -0.34
SGMS1-203ENST00000429490 TMEM255BQ8WV15 326 aa12.9□□□□□ -0.34
SGMS1-203ENST00000429490 UPRTQ96BW1 309 aa12.9□□□□□ -0.34
SGMS1-203ENST00000429490 DTD2Q96FN9 168 aa12.9□□□□□ -0.34
SGMS1-203ENST00000429490 NLGN3Q9NZ94 848 aa12.9□□□□□ -0.34
SGMS1-203ENST00000429490 CALML5Q9NZT1 146 aa12.9□□□□□ -0.34
SGMS1-203ENST00000429490 DPP7Q9UHL4 492 aa12.9□□□□□ -0.34
SGMS1-203ENST00000429490 SCN2AQ99250 2005 aa12.9□□□□□ -0.35
SGMS1-203ENST00000429490 L7N2F9 121 aa12.89□□□□□ -0.35
SGMS1-203ENST00000429490 RGS13O14921 159 aa12.89□□□□□ -0.35
SGMS1-203ENST00000429490 FLRT2O43155 660 aa12.89□□□□□ -0.35
SGMS1-203ENST00000429490 PIPP12273 146 aaPredicted RBP12.89□□□□□ -0.35
SGMS1-203ENST00000429490 CPEP16870 476 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms