RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 OVOS1Q6IE37 1185 aa8.34□□□□□ -1.07
CDC42BPA-206ENST00000429440 METTL7BQ6UX53 244 aa8.34□□□□□ -1.07
CDC42BPA-206ENST00000429440 SSX6Q7RTT6 188 aa8.34□□□□□ -1.07
CDC42BPA-206ENST00000429440 RABEPKQ7Z6M1 372 aa8.34□□□□□ -1.07
CDC42BPA-206ENST00000429440 SERPINA11Q86U17 422 aa8.34□□□□□ -1.07
CDC42BPA-206ENST00000429440 UNC93AQ86WB7 457 aa8.34□□□□□ -1.07
CDC42BPA-206ENST00000429440 ANGPTL5Q86XS5 388 aa8.34□□□□□ -1.07
CDC42BPA-206ENST00000429440 OR6V1Q8N148 313 aa8.34□□□□□ -1.07
CDC42BPA-206ENST00000429440 TMEM130Q8N3G9 435 aa8.34□□□□□ -1.07
CDC42BPA-206ENST00000429440 DBF4BQ8NFT6 615 aa8.34□□□□□ -1.07
CDC42BPA-206ENST00000429440 OR10G2Q8NGC3 310 aa8.34□□□□□ -1.07
CDC42BPA-206ENST00000429440 GPR150Q8NGU9 434 aa8.34□□□□□ -1.07
CDC42BPA-206ENST00000429440 OR56A3Q8NH54 315 aa8.34□□□□□ -1.07
CDC42BPA-206ENST00000429440 TMEM203Q969S6 136 aa8.34□□□□□ -1.07
CDC42BPA-206ENST00000429440 KCTD12Q96CX2 325 aaKnown RBP8.34□□□□□ -1.07
CDC42BPA-206ENST00000429440 FBXO17Q96EF6 278 aa8.34□□□□□ -1.07
CDC42BPA-206ENST00000429440 PIWIL1Q96J94 861 aaKnown RBP8.34□□□□□ -1.07
CDC42BPA-206ENST00000429440 PKP4Q99569 1192 aa8.34□□□□□ -1.07
CDC42BPA-206ENST00000429440 GINS4Q9BRT9 223 aa8.34□□□□□ -1.07
CDC42BPA-206ENST00000429440 C11orf84Q9BUA3 381 aaPredicted RBP8.34□□□□□ -1.07
CDC42BPA-206ENST00000429440 TEX12Q9BXU0 123 aa8.34□□□□□ -1.07
CDC42BPA-206ENST00000429440 WDR26Q9H7D7 661 aa8.34□□□□□ -1.07
CDC42BPA-206ENST00000429440 TUBA4BQ9H853 241 aa8.34□□□□□ -1.07
CDC42BPA-206ENST00000429440 CERS4Q9HA82 394 aa8.34□□□□□ -1.07
CDC42BPA-206ENST00000429440 TMEM138Q9NPI0 162 aa8.34□□□□□ -1.07
CDC42BPA-206ENST00000429440 MIEF1Q9NQG6 463 aa8.34□□□□□ -1.07
CDC42BPA-206ENST00000429440 FNDC3AQ9Y2H6 1198 aaKnown RBP8.34□□□□□ -1.07
CDC42BPA-206ENST00000429440 A0A1B0GTL3 188 aa8.34□□□□□ -1.07
CDC42BPA-206ENST00000429440 SMIM30A4D0T7 59 aa8.34□□□□□ -1.07
CDC42BPA-206ENST00000429440 LRRC14BA6NHZ5 514 aa8.34□□□□□ -1.07
CDC42BPA-206ENST00000429440 SNRPGP15A8MWD9 76 aa8.34□□□□□ -1.07
CDC42BPA-206ENST00000429440 OR2T1O43869 369 aa8.34□□□□□ -1.07
CDC42BPA-206ENST00000429440 RDH16O75452 317 aa8.34□□□□□ -1.07
CDC42BPA-206ENST00000429440 INHAP05111 366 aa8.34□□□□□ -1.07
CDC42BPA-206ENST00000429440 HOXC6P09630 235 aa8.34□□□□□ -1.07
CDC42BPA-206ENST00000429440 STAG3L1P0CL83 205 aa8.34□□□□□ -1.07
CDC42BPA-206ENST00000429440 KDELR2P33947 212 aa8.34□□□□□ -1.07
CDC42BPA-206ENST00000429440 GPR3P46089 330 aa8.34□□□□□ -1.07
CDC42BPA-206ENST00000429440 PTGES3Q15185 160 aaKnown RBP8.34□□□□□ -1.07
CDC42BPA-206ENST00000429440 USF2Q15853 346 aaPredicted RBP8.34□□□□□ -1.07
CDC42BPA-206ENST00000429440 DUOXA1Q1HG43 343 aa8.34□□□□□ -1.07
CDC42BPA-206ENST00000429440 SLC27A1Q6PCB7 646 aa8.34□□□□□ -1.07
CDC42BPA-206ENST00000429440 ZNF613Q6PF04 617 aa8.34□□□□□ -1.07
CDC42BPA-206ENST00000429440 CLEC2AQ6UVW9 174 aa8.34□□□□□ -1.07
CDC42BPA-206ENST00000429440 TMEM207Q6UWW9 146 aa8.34□□□□□ -1.07
CDC42BPA-206ENST00000429440 SIAH3Q8IW03 269 aa8.34□□□□□ -1.07
CDC42BPA-206ENST00000429440 GPC2Q8N158 579 aa8.34□□□□□ -1.07
CDC42BPA-206ENST00000429440 PRSS35Q8N3Z0 413 aa8.34□□□□□ -1.07
CDC42BPA-206ENST00000429440 PPHLN1Q8NEY8 458 aaKnown RBP8.34□□□□□ -1.07
CDC42BPA-206ENST00000429440 OR9Q2Q8NGE9 314 aa8.34□□□□□ -1.07
CDC42BPA-206ENST00000429440 PXYLP1Q8TE99 480 aa8.34□□□□□ -1.07
CDC42BPA-206ENST00000429440 ASB13Q8WXK3 278 aa8.34□□□□□ -1.07
CDC42BPA-206ENST00000429440 KHSRPQ92945 711 aaKnown RBP eCLIP8.34□□□□□ -1.071e-6■■■■□ 21.9
CDC42BPA-206ENST00000429440 GCDHQ92947 438 aaPredicted RBP8.34□□□□□ -1.07
CDC42BPA-206ENST00000429440 BSCL2Q96G97 398 aaPredicted RBP8.34□□□□□ -1.07
CDC42BPA-206ENST00000429440 HSH2DQ96JZ2 352 aa8.34□□□□□ -1.07
CDC42BPA-206ENST00000429440 ZNF385AQ96PM9 386 aaKnown RBP8.34□□□□□ -1.07
CDC42BPA-206ENST00000429440 FCRL5Q96RD9 977 aa8.34□□□□□ -1.07
CDC42BPA-206ENST00000429440 PIGQQ9BRB3 760 aa8.34□□□□□ -1.07
CDC42BPA-206ENST00000429440 COLEC11Q9BWP8 271 aa8.34□□□□□ -1.07
CDC42BPA-206ENST00000429440 OR51V1Q9H2C8 321 aa8.34□□□□□ -1.07
CDC42BPA-206ENST00000429440 PTPRHQ9HD43 1115 aa8.34□□□□□ -1.07
CDC42BPA-206ENST00000429440 TXNRD2Q9NNW7 524 aa8.34□□□□□ -1.07
CDC42BPA-206ENST00000429440 SIRT7Q9NRC8 400 aa8.34□□□□□ -1.07
CDC42BPA-206ENST00000429440 TREX1Q9NSU2 369 aa8.34□□□□□ -1.07
CDC42BPA-206ENST00000429440 SPIN1Q9Y657 262 aaPredicted RBP8.34□□□□□ -1.07
CDC42BPA-206ENST00000429440 CARNS1A5YM72 827 aa8.33□□□□□ -1.08
CDC42BPA-206ENST00000429440 GABRR3A8MPY1 467 aa8.33□□□□□ -1.08
CDC42BPA-206ENST00000429440 TNFRSF11BO00300 401 aa8.33□□□□□ -1.08
CDC42BPA-206ENST00000429440 PRRG1O14668 218 aa8.33□□□□□ -1.08
CDC42BPA-206ENST00000429440 CIDEAO60543 219 aa8.33□□□□□ -1.08
CDC42BPA-206ENST00000429440 ENTPD6O75354 484 aa8.33□□□□□ -1.08
CDC42BPA-206ENST00000429440 IGHA2P01877 340 aa8.33□□□□□ -1.08
CDC42BPA-206ENST00000429440 GJB1P08034 283 aa8.33□□□□□ -1.08
CDC42BPA-206ENST00000429440 RHOP08100 348 aa8.33□□□□□ -1.08
CDC42BPA-206ENST00000429440 C1GALT1C1LP0DN25 315 aa8.33□□□□□ -1.08
CDC42BPA-206ENST00000429440 GKP32189 559 aa8.33□□□□□ -1.08
CDC42BPA-206ENST00000429440 SRP9P49458 86 aaKnown RBP8.33□□□□□ -1.08
CDC42BPA-206ENST00000429440 EPHB3P54753 998 aa8.33□□□□□ -1.08
CDC42BPA-206ENST00000429440 RPS25P62851 125 aaKnown RBP8.33□□□□□ -1.08
CDC42BPA-206ENST00000429440 LAMTOR4Q0VGL1 99 aa8.33□□□□□ -1.08
CDC42BPA-206ENST00000429440 SGCGQ13326 291 aa8.33□□□□□ -1.08
CDC42BPA-206ENST00000429440 NAE1Q13564 534 aa8.33□□□□□ -1.08
CDC42BPA-206ENST00000429440 SF1Q15637 639 aaKnown RBP8.33□□□□□ -1.08
CDC42BPA-206ENST00000429440 FAM187BQ17R55 369 aa8.33□□□□□ -1.08
CDC42BPA-206ENST00000429440 ZNF699Q32M78 642 aa8.33□□□□□ -1.08
CDC42BPA-206ENST00000429440 FAM69AQ5T7M9 428 aa8.33□□□□□ -1.08
CDC42BPA-206ENST00000429440 OR52W1Q6IF63 320 aa8.33□□□□□ -1.08
CDC42BPA-206ENST00000429440 ARHGAP11AQ6P4F7 1023 aa8.33□□□□□ -1.08
CDC42BPA-206ENST00000429440 ZNF783Q6ZMS7 281 aa8.33□□□□□ -1.08
CDC42BPA-206ENST00000429440 MSANTD1Q6ZTZ1 278 aa8.33□□□□□ -1.08
CDC42BPA-206ENST00000429440 PDZD4Q76G19 769 aaPredicted RBP8.33□□□□□ -1.08
CDC42BPA-206ENST00000429440 GPR135Q8IZ08 494 aa8.33□□□□□ -1.08
CDC42BPA-206ENST00000429440 COL26A1Q96A83 441 aa8.33□□□□□ -1.08
CDC42BPA-206ENST00000429440 ZNF707Q96C28 371 aaPredicted RBP8.33□□□□□ -1.08
CDC42BPA-206ENST00000429440 MED8Q96G25 268 aa8.33□□□□□ -1.08
CDC42BPA-206ENST00000429440 ATOH8Q96SQ7 321 aa8.33□□□□□ -1.08
CDC42BPA-206ENST00000429440 GPR20Q99678 358 aa8.33□□□□□ -1.08
CDC42BPA-206ENST00000429440 SPACA1Q9HBV2 294 aa8.33□□□□□ -1.08
CDC42BPA-206ENST00000429440 SEMA4BQ9NPR2 832 aaPredicted RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms