RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 ZNF431Q8TF32 576 aaPredicted RBP11.69□□□□□ -0.54
CDH3-202ENST00000429102 CNRIP1Q96F85 164 aaPredicted RBP11.69□□□□□ -0.54
CDH3-202ENST00000429102 HCAR1Q9BXC0 346 aa11.69□□□□□ -0.54
CDH3-202ENST00000429102 POLDIP3Q9BY77 421 aaKnown RBP11.69□□□□□ -0.54
CDH3-202ENST00000429102 SLC28A3Q9HAS3 691 aa11.69□□□□□ -0.54
CDH3-202ENST00000429102 NEUROD4Q9HD90 331 aa11.69□□□□□ -0.54
CDH3-202ENST00000429102 HINT3Q9NQE9 182 aaKnown RBP11.69□□□□□ -0.54
CDH3-202ENST00000429102 SLC7A7Q9UM01 511 aa11.69□□□□□ -0.54
CDH3-202ENST00000429102 PLXNA3P51805 1871 aa11.69□□□□□ -0.54
CDH3-202ENST00000429102 IQCMA0A1B0GVH7 501 aa11.69□□□□□ -0.54
CDH3-202ENST00000429102 OTOL1A6NHN0 477 aaPredicted RBP11.69□□□□□ -0.54
CDH3-202ENST00000429102 CDC42EP2O14613 210 aa11.69□□□□□ -0.54
CDH3-202ENST00000429102 EPCAMP16422 314 aa11.69□□□□□ -0.54
CDH3-202ENST00000429102 GIFP27352 417 aa11.69□□□□□ -0.54
CDH3-202ENST00000429102 PYCR1P32322 319 aa11.69□□□□□ -0.54
CDH3-202ENST00000429102 OR3A3P47888 321 aa11.69□□□□□ -0.54
CDH3-202ENST00000429102 RPA4Q13156 261 aa11.69□□□□□ -0.54
CDH3-202ENST00000429102 YIF1BQ5BJH7 314 aa11.69□□□□□ -0.54
CDH3-202ENST00000429102 ENTPD8Q5MY95 495 aa11.69□□□□□ -0.54
CDH3-202ENST00000429102 OR4C11Q6IEV9 310 aa11.69□□□□□ -0.54
CDH3-202ENST00000429102 KLHDC8AQ8IYD2 350 aa11.69□□□□□ -0.54
CDH3-202ENST00000429102 SLC38A6Q8IZM9 456 aa11.69□□□□□ -0.54
CDH3-202ENST00000429102 KLHL36Q8N4N3 616 aa11.69□□□□□ -0.54
CDH3-202ENST00000429102 OR4E2Q8NGC2 313 aa11.69□□□□□ -0.54
CDH3-202ENST00000429102 PIGXQ8TBF5 258 aa11.69□□□□□ -0.54
CDH3-202ENST00000429102 CXorf40BQ96DE9 158 aa11.69□□□□□ -0.54
CDH3-202ENST00000429102 MRGPRX3Q96LB0 322 aa11.69□□□□□ -0.54
CDH3-202ENST00000429102 FAIM2Q9BWQ8 316 aa11.69□□□□□ -0.54
CDH3-202ENST00000429102 LHX9Q9NQ69 397 aa11.69□□□□□ -0.54
CDH3-202ENST00000429102 MRPS23Q9Y3D9 190 aaKnown RBP11.69□□□□□ -0.54
CDH3-202ENST00000429102 TRAV27A0A087WT01 109 aa11.69□□□□□ -0.54
CDH3-202ENST00000429102 A0A1W2PR48 441 aa11.69□□□□□ -0.54
CDH3-202ENST00000429102 SNTNA6NMZ2 147 aa11.69□□□□□ -0.54
CDH3-202ENST00000429102 CENPBD1B2RD01 187 aa11.69□□□□□ -0.54
CDH3-202ENST00000429102 SLC31A1O15431 190 aa11.69□□□□□ -0.54
CDH3-202ENST00000429102 UBXN7O94888 489 aa11.69□□□□□ -0.54
CDH3-202ENST00000429102 LATS1O95835 1130 aa11.69□□□□□ -0.54
CDH3-202ENST00000429102 HLA-DPB1P04440 258 aa11.69□□□□□ -0.54
CDH3-202ENST00000429102 ALPPP05187 535 aa11.69□□□□□ -0.54
CDH3-202ENST00000429102 SNRPBP14678 240 aaKnown RBP11.69□□□□□ -0.54
CDH3-202ENST00000429102 NAA10P41227 235 aaPredicted RBP11.69□□□□□ -0.54
CDH3-202ENST00000429102 PDX1P52945 283 aa11.69□□□□□ -0.54
CDH3-202ENST00000429102 VSX2P58304 361 aaPredicted RBP11.69□□□□□ -0.54
CDH3-202ENST00000429102 MAB21L1Q13394 359 aa11.69□□□□□ -0.54
CDH3-202ENST00000429102 GPR176Q14439 515 aa11.69□□□□□ -0.54
CDH3-202ENST00000429102 NNATQ16517 81 aa11.69□□□□□ -0.54
CDH3-202ENST00000429102 CHMP1BQ7LBR1 199 aa11.69□□□□□ -0.54
CDH3-202ENST00000429102 FAM26EQ8N5C1 309 aa11.69□□□□□ -0.54
CDH3-202ENST00000429102 LRRC17Q8N6Y2 441 aa11.69□□□□□ -0.54
CDH3-202ENST00000429102 NUP43Q8NFH3 380 aa11.69□□□□□ -0.54
CDH3-202ENST00000429102 LRRC20Q8TCA0 184 aa11.69□□□□□ -0.54
CDH3-202ENST00000429102 RIPOR3Q96MK2 946 aa11.69□□□□□ -0.54
CDH3-202ENST00000429102 ATF6BQ99941 703 aa11.69□□□□□ -0.54
CDH3-202ENST00000429102 THAP7Q9BT49 309 aaPredicted RBP11.69□□□□□ -0.54
CDH3-202ENST00000429102 IFT27Q9BW83 186 aa11.69□□□□□ -0.54
CDH3-202ENST00000429102 RBCK1Q9BYM8 510 aa11.69□□□□□ -0.54
CDH3-202ENST00000429102 EIF3KQ9UBQ5 218 aaKnown RBP11.69□□□□□ -0.54
CDH3-202ENST00000429102 KCND3Q9UK17 655 aa11.69□□□□□ -0.54
CDH3-202ENST00000429102 NCKAP1Q9Y2A7 1128 aa11.69□□□□□ -0.54
CDH3-202ENST00000429102 PPIL1Q9Y3C6 166 aa11.69□□□□□ -0.54
CDH3-202ENST00000429102 SPTBN5Q9NRC6 3674 aaKnown RBP11.69□□□□□ -0.54
CDH3-202ENST00000429102 REV3LO60673 3130 aa11.69□□□□□ -0.54
CDH3-202ENST00000429102 GATBO75879 557 aaKnown RBP11.68□□□□□ -0.54
CDH3-202ENST00000429102 SOX30O94993 753 aa11.68□□□□□ -0.54
CDH3-202ENST00000429102 MT-ND4P03905 459 aa11.68□□□□□ -0.54
CDH3-202ENST00000429102 GZMKP49863 264 aa11.68□□□□□ -0.54
CDH3-202ENST00000429102 ZNF81P51508 661 aa11.68□□□□□ -0.54
CDH3-202ENST00000429102 LIMK1P53667 647 aa11.68□□□□□ -0.54
CDH3-202ENST00000429102 CLDN12P56749 244 aa11.68□□□□□ -0.54
CDH3-202ENST00000429102 SNRPNP63162 240 aaKnown RBP11.68□□□□□ -0.54
CDH3-202ENST00000429102 E2F1Q01094 437 aa11.68□□□□□ -0.54
CDH3-202ENST00000429102 NTRK2Q16620 822 aa11.68□□□□□ -0.54
CDH3-202ENST00000429102 SLC25A35Q3KQZ1 300 aa11.68□□□□□ -0.54
CDH3-202ENST00000429102 PXDC1Q5TGL8 231 aa11.68□□□□□ -0.54
CDH3-202ENST00000429102 C19orf48Q6RUI8 117 aa11.68□□□□□ -0.54
CDH3-202ENST00000429102 DPPA4Q7L190 304 aa11.68□□□□□ -0.54
CDH3-202ENST00000429102 NR2C2APQ86WQ0 139 aa11.68□□□□□ -0.54
CDH3-202ENST00000429102 RDH10Q8IZV5 341 aa11.68□□□□□ -0.54
CDH3-202ENST00000429102 LINC01555Q8NAE3 123 aa11.68□□□□□ -0.54
CDH3-202ENST00000429102 ZNF671Q8TAW3 534 aa11.68□□□□□ -0.54
CDH3-202ENST00000429102 RNF170Q96K19 258 aa11.68□□□□□ -0.54
CDH3-202ENST00000429102 NKX3-1Q99801 234 aaPredicted RBP11.68□□□□□ -0.54
CDH3-202ENST00000429102 GSDMCQ9BYG8 508 aa11.68□□□□□ -0.54
CDH3-202ENST00000429102 CREBZFQ9NS37 354 aa11.68□□□□□ -0.54
CDH3-202ENST00000429102 PPIEQ9UNP9 301 aaKnown RBP11.68□□□□□ -0.54
CDH3-202ENST00000429102 TRAPPC4Q9Y296 219 aa11.68□□□□□ -0.54
CDH3-202ENST00000429102 HELZP42694 1942 aaKnown RBP11.68□□□□□ -0.54
CDH3-202ENST00000429102 TRPM6Q9BX84 2022 aa11.68□□□□□ -0.54
CDH3-202ENST00000429102 A0A0A6YYJ9 748 aa11.68□□□□□ -0.54
CDH3-202ENST00000429102 EIF4EP06730 217 aaKnown RBP11.68□□□□□ -0.54
CDH3-202ENST00000429102 ADH1AP07327 375 aa11.68□□□□□ -0.54
CDH3-202ENST00000429102 CXCL3P19876 107 aa11.68□□□□□ -0.54
CDH3-202ENST00000429102 P2RX3P56373 397 aa11.68□□□□□ -0.54
CDH3-202ENST00000429102 TAS2R38P59533 333 aa11.68□□□□□ -0.54
CDH3-202ENST00000429102 SRSF5Q13243 272 aaKnown RBP11.68□□□□□ -0.54
CDH3-202ENST00000429102 FAAP20Q6NZ36 180 aa11.68□□□□□ -0.54
CDH3-202ENST00000429102 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.68□□□□□ -0.54
CDH3-202ENST00000429102 PEX5LQ8IYB4 626 aa11.68□□□□□ -0.54
CDH3-202ENST00000429102 PFN4Q8NHR9 129 aa11.68□□□□□ -0.54
CDH3-202ENST00000429102 CDS1Q92903 461 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms