RNA–Protein interactions for RNA: ENST00000428982.4

SYNGAP1-203, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-203ENST00000428982 RLN1P04808 185 aa13.61□□□□□ -0.23
SYNGAP1-203ENST00000428982 CERS1P27544 350 aa13.61□□□□□ -0.23
SYNGAP1-203ENST00000428982 NSG1P42857 185 aa13.61□□□□□ -0.23
SYNGAP1-203ENST00000428982 PPT1P50897 306 aa13.61□□□□□ -0.23
SYNGAP1-203ENST00000428982 FNDC3BQ53EP0 1204 aaKnown RBP13.61□□□□□ -0.23
SYNGAP1-203ENST00000428982 RAET1GQ6H3X3 334 aa13.61□□□□□ -0.23
SYNGAP1-203ENST00000428982 SLC30A6Q6NXT4 461 aa13.61□□□□□ -0.23
SYNGAP1-203ENST00000428982 GRASPQ7Z6J2 395 aaPredicted RBP13.61□□□□□ -0.23
SYNGAP1-203ENST00000428982 PHYKPLQ8IUZ5 450 aa13.61□□□□□ -0.23
SYNGAP1-203ENST00000428982 APOLD1Q96LR9 279 aa13.61□□□□□ -0.23
SYNGAP1-203ENST00000428982 FEVQ99581 238 aa13.61□□□□□ -0.23
SYNGAP1-203ENST00000428982 CWH43Q9H720 699 aa13.61□□□□□ -0.23
SYNGAP1-203ENST00000428982 TDP1Q9NUW8 608 aa13.61□□□□□ -0.23
SYNGAP1-203ENST00000428982 AKAP7Q9P0M2 348 aaPredicted RBP13.61□□□□□ -0.23
SYNGAP1-203ENST00000428982 PCDHGA6Q9Y5G7 932 aa13.61□□□□□ -0.23
SYNGAP1-203ENST00000428982 GNG14A0A1W2PPG7 69 aa13.61□□□□□ -0.23
SYNGAP1-203ENST00000428982 A8MXK9 166 aa13.61□□□□□ -0.23
SYNGAP1-203ENST00000428982 GPR31O00270 319 aa13.61□□□□□ -0.23
SYNGAP1-203ENST00000428982 CATP04040 527 aaKnown RBP13.61□□□□□ -0.23
SYNGAP1-203ENST00000428982 APEHP13798 732 aaKnown RBP13.61□□□□□ -0.23
SYNGAP1-203ENST00000428982 CXCL3P19876 107 aa13.61□□□□□ -0.23
SYNGAP1-203ENST00000428982 RAP2BP61225 183 aa13.61□□□□□ -0.23
SYNGAP1-203ENST00000428982 HMGCS1Q01581 520 aa13.61□□□□□ -0.23
SYNGAP1-203ENST00000428982 ACY1Q03154 408 aa13.61□□□□□ -0.23
SYNGAP1-203ENST00000428982 CLINT1Q14677 625 aa13.61□□□□□ -0.23
SYNGAP1-203ENST00000428982 CARD16Q5EG05 197 aa13.61□□□□□ -0.23
SYNGAP1-203ENST00000428982 FRMPD2BQ6IN97 320 aa13.61□□□□□ -0.23
SYNGAP1-203ENST00000428982 SKA3Q8IX90 412 aa13.61□□□□□ -0.23
SYNGAP1-203ENST00000428982 OR52B6Q8NGF0 335 aa13.61□□□□□ -0.23
SYNGAP1-203ENST00000428982 HSH2DQ96JZ2 352 aa13.61□□□□□ -0.23
SYNGAP1-203ENST00000428982 TOLLIPQ9H0E2 274 aa13.61□□□□□ -0.23
SYNGAP1-203ENST00000428982 DLL4Q9NR61 685 aa13.61□□□□□ -0.23
SYNGAP1-203ENST00000428982 VAPAQ9P0L0 249 aa13.61□□□□□ -0.23
SYNGAP1-203ENST00000428982 SLC13A4Q9UKG4 626 aa13.61□□□□□ -0.23
SYNGAP1-203ENST00000428982 HYKKA2RU49 373 aa13.61□□□□□ -0.23
SYNGAP1-203ENST00000428982 FAM221BA6H8Z2 402 aa13.61□□□□□ -0.23
SYNGAP1-203ENST00000428982 CTPS1P17812 591 aa13.61□□□□□ -0.23
SYNGAP1-203ENST00000428982 CHI3L1P36222 383 aaPredicted RBP13.61□□□□□ -0.23
SYNGAP1-203ENST00000428982 AKR1C2P52895 323 aa13.61□□□□□ -0.23
SYNGAP1-203ENST00000428982 AKR1C1Q04828 323 aa13.61□□□□□ -0.23
SYNGAP1-203ENST00000428982 TEAD2Q15562 447 aa13.61□□□□□ -0.23
SYNGAP1-203ENST00000428982 NCEH1Q6PIU2 408 aa13.61□□□□□ -0.23
SYNGAP1-203ENST00000428982 SAMD12Q8N8I0 201 aa13.61□□□□□ -0.23
SYNGAP1-203ENST00000428982 ZDHHC6Q9H6R6 413 aa13.61□□□□□ -0.23
SYNGAP1-203ENST00000428982 PLCXD1Q9NUJ7 323 aa13.61□□□□□ -0.23
SYNGAP1-203ENST00000428982 TXNL4BQ9NX01 149 aaKnown RBP13.61□□□□□ -0.23
SYNGAP1-203ENST00000428982 DNAJC27Q9NZQ0 273 aa13.61□□□□□ -0.23
SYNGAP1-203ENST00000428982 WASF3Q9UPY6 502 aa13.61□□□□□ -0.23
SYNGAP1-203ENST00000428982 DYRK1BQ9Y463 629 aa13.61□□□□□ -0.23
SYNGAP1-203ENST00000428982 URADA6NGE7 173 aa13.6□□□□□ -0.23
SYNGAP1-203ENST00000428982 CLIC1O00299 241 aa13.6□□□□□ -0.23
SYNGAP1-203ENST00000428982 GFRA2O00451 464 aa13.6□□□□□ -0.23
SYNGAP1-203ENST00000428982 PITPNAQ00169 270 aa13.6□□□□□ -0.23
SYNGAP1-203ENST00000428982 ABRAXAS2Q15018 415 aa13.6□□□□□ -0.23
SYNGAP1-203ENST00000428982 P2RY14Q15391 338 aa13.6□□□□□ -0.23
SYNGAP1-203ENST00000428982 GLYR1Q49A26 553 aaPredicted RBP13.6□□□□□ -0.23
SYNGAP1-203ENST00000428982 TMEM240Q5SV17 173 aa13.6□□□□□ -0.23
SYNGAP1-203ENST00000428982 CPTPQ5TA50 214 aa13.6□□□□□ -0.23
SYNGAP1-203ENST00000428982 MAMDC2Q7Z304 686 aaPredicted RBP13.6□□□□□ -0.23
SYNGAP1-203ENST00000428982 RELL2Q8NC24 303 aaPredicted RBP13.6□□□□□ -0.23
SYNGAP1-203ENST00000428982 GTF3AQ92664 365 aaKnown RBP13.6□□□□□ -0.23
SYNGAP1-203ENST00000428982 CLP1Q92989 425 aaKnown RBP13.6□□□□□ -0.23
SYNGAP1-203ENST00000428982 RAB3CQ96E17 227 aa13.6□□□□□ -0.23
SYNGAP1-203ENST00000428982 CPNE2Q96FN4 548 aaPredicted RBP13.6□□□□□ -0.23
SYNGAP1-203ENST00000428982 ANGPT4Q9Y264 503 aa13.6□□□□□ -0.23
SYNGAP1-203ENST00000428982 HTR4Q13639 388 aa13.6□□□□□ -0.23
SYNGAP1-203ENST00000428982 TRIM40Q6P9F5 258 aa13.6□□□□□ -0.23
SYNGAP1-203ENST00000428982 LINGO4Q6UY18 593 aa13.6□□□□□ -0.23
SYNGAP1-203ENST00000428982 TMUB2Q71RG4 321 aa13.6□□□□□ -0.23
SYNGAP1-203ENST00000428982 LHFPL3Q86UP9 236 aa13.6□□□□□ -0.23
SYNGAP1-203ENST00000428982 ZNF548Q8NEK5 533 aaPredicted RBP13.6□□□□□ -0.23
SYNGAP1-203ENST00000428982 OR2L5Q8NG80 312 aa13.6□□□□□ -0.23
SYNGAP1-203ENST00000428982 NEIL3Q8TAT5 605 aa13.6□□□□□ -0.23
SYNGAP1-203ENST00000428982 ZNF671Q8TAW3 534 aa13.6□□□□□ -0.23
SYNGAP1-203ENST00000428982 SUSD6Q92537 303 aa13.6□□□□□ -0.23
SYNGAP1-203ENST00000428982 RHOVQ96L33 236 aa13.6□□□□□ -0.23
SYNGAP1-203ENST00000428982 MFFQ9GZY8 342 aa13.6□□□□□ -0.23
SYNGAP1-203ENST00000428982 LMAN2LQ9H0V9 348 aa13.6□□□□□ -0.23
SYNGAP1-203ENST00000428982 NSUN3Q9H649 340 aaKnown RBP13.6□□□□□ -0.23
SYNGAP1-203ENST00000428982 ASIC5Q9NY37 505 aa13.6□□□□□ -0.23
SYNGAP1-203ENST00000428982 ASF1AQ9Y294 204 aa13.6□□□□□ -0.23
SYNGAP1-203ENST00000428982 C17orf113A0A1B0GUU1 675 aa13.6□□□□□ -0.23
SYNGAP1-203ENST00000428982 C2orf78A6NCI8 922 aa13.6□□□□□ -0.23
SYNGAP1-203ENST00000428982 TNFRSF10BO14763 440 aa13.6□□□□□ -0.23
SYNGAP1-203ENST00000428982 SCAMP2O15127 329 aaKnown RBP13.6□□□□□ -0.23
SYNGAP1-203ENST00000428982 IGHA2P01877 340 aa13.6□□□□□ -0.23
SYNGAP1-203ENST00000428982 RHOP08100 348 aa13.6□□□□□ -0.23
SYNGAP1-203ENST00000428982 MMP2P08253 660 aa13.6□□□□□ -0.23
SYNGAP1-203ENST00000428982 NQO2P16083 231 aa13.6□□□□□ -0.23
SYNGAP1-203ENST00000428982 HTR6P50406 440 aa13.6□□□□□ -0.23
SYNGAP1-203ENST00000428982 BHLHA9Q7RTU4 235 aa13.6□□□□□ -0.23
SYNGAP1-203ENST00000428982 ANKRD46Q86W74 232 aa13.6□□□□□ -0.23
SYNGAP1-203ENST00000428982 OR52P1PQ8NH57 321 aa13.6□□□□□ -0.23
SYNGAP1-203ENST00000428982 TMEM185BQ9H7F4 350 aa13.6□□□□□ -0.23
SYNGAP1-203ENST00000428982 DEC1Q9P2X7 70 aa13.6□□□□□ -0.23
SYNGAP1-203ENST00000428982 EXO1Q9UQ84 846 aaKnown RBP13.6□□□□□ -0.23
SYNGAP1-203ENST00000428982 MED16Q9Y2X0 877 aa13.6□□□□□ -0.23
SYNGAP1-203ENST00000428982 OR2AT4A6NND4 320 aa13.6□□□□□ -0.23
SYNGAP1-203ENST00000428982 LOC730098B7Z3J9 87 aa13.6□□□□□ -0.23
SYNGAP1-203ENST00000428982 WASH3PC4AMC7 463 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms