RNA–Protein interactions for RNA: ENST00000428848.7

CDH13-202, Transcript of cadherin 13, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CDH13, Length 2,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-202ENST00000428848 SF3A2Q15428 464 aaKnown RBP8.28□□□□□ -1.08
CDH13-202ENST00000428848 WSCD2Q2TBF2 565 aa8.28□□□□□ -1.08
CDH13-202ENST00000428848 CLVS2Q5SYC1 327 aa8.28□□□□□ -1.08
CDH13-202ENST00000428848 TRIQKQ629K1 86 aa8.28□□□□□ -1.08
CDH13-202ENST00000428848 VASNQ6EMK4 673 aa8.28□□□□□ -1.08
CDH13-202ENST00000428848 TMEM81Q6P7N7 255 aa8.28□□□□□ -1.08
CDH13-202ENST00000428848 KIAA1324Q6UXG2 1013 aaKnown RBP8.28□□□□□ -1.08
CDH13-202ENST00000428848 C16orf62Q7Z3J2 963 aa8.28□□□□□ -1.08
CDH13-202ENST00000428848 TRMT11Q7Z4G4 463 aaKnown RBP8.28□□□□□ -1.08
CDH13-202ENST00000428848 UBE3DQ7Z6J8 389 aa8.28□□□□□ -1.08
CDH13-202ENST00000428848 C11orf96Q7Z7L8 435 aa8.28□□□□□ -1.08
CDH13-202ENST00000428848 TRAPPC5Q8IUR0 188 aa8.28□□□□□ -1.08
CDH13-202ENST00000428848 OR5D16Q8NGK9 328 aa8.28□□□□□ -1.08
CDH13-202ENST00000428848 OR2L2Q8NH16 312 aa8.28□□□□□ -1.08
CDH13-202ENST00000428848 BBS10Q8TAM1 723 aa8.28□□□□□ -1.08
CDH13-202ENST00000428848 ZFPM2Q8WW38 1151 aa8.28□□□□□ -1.08
CDH13-202ENST00000428848 UCN3Q969E3 161 aa8.28□□□□□ -1.08
CDH13-202ENST00000428848 CREB3L1Q96BA8 519 aa8.28□□□□□ -1.08
CDH13-202ENST00000428848 ZSWIM3Q96MP5 696 aa8.28□□□□□ -1.08
CDH13-202ENST00000428848 EGLN3Q9H6Z9 239 aa8.28□□□□□ -1.08
CDH13-202ENST00000428848 NT5DC2Q9H857 520 aa8.28□□□□□ -1.08
CDH13-202ENST00000428848 FOLH1BQ9HBA9 442 aa8.28□□□□□ -1.08
CDH13-202ENST00000428848 CUEDC1Q9NWM3 386 aaPredicted RBP8.28□□□□□ -1.08
CDH13-202ENST00000428848 HCFC1R1Q9NWW0 138 aa8.28□□□□□ -1.08
CDH13-202ENST00000428848 TEX10Q9NXF1 929 aaPredicted RBP8.28□□□□□ -1.08
CDH13-202ENST00000428848 PCDH10Q9P2E7 1040 aa8.28□□□□□ -1.08
CDH13-202ENST00000428848 COMMD3Q9UBI1 195 aa8.28□□□□□ -1.08
CDH13-202ENST00000428848 LIPT1Q9Y234 373 aa8.28□□□□□ -1.08
CDH13-202ENST00000428848 SLC9A8Q9Y2E8 581 aa8.28□□□□□ -1.08
CDH13-202ENST00000428848 ZNF175Q9Y473 711 aa8.28□□□□□ -1.08
CDH13-202ENST00000428848 CDH10Q9Y6N8 788 aa8.28□□□□□ -1.08
CDH13-202ENST00000428848 RNF215Q9Y6U7 377 aa8.28□□□□□ -1.08
CDH13-202ENST00000428848 MDC1Q14676 2089 aaKnown RBP8.27□□□□□ -1.08
CDH13-202ENST00000428848 FAM240BA0A1B0GVZ2 78 aa8.27□□□□□ -1.09
CDH13-202ENST00000428848 POP7O75817 140 aaKnown RBP8.27□□□□□ -1.09
CDH13-202ENST00000428848 UBXN7O94888 489 aa8.27□□□□□ -1.09
CDH13-202ENST00000428848 OR5F1O95221 314 aa8.27□□□□□ -1.09
CDH13-202ENST00000428848 APOL3O95236 402 aa8.27□□□□□ -1.09
CDH13-202ENST00000428848 CHRM4P08173 479 aa8.27□□□□□ -1.09
CDH13-202ENST00000428848 LINC00271P0C7V0 271 aa8.27□□□□□ -1.09
CDH13-202ENST00000428848 SOX18P35713 384 aa8.27□□□□□ -1.09
CDH13-202ENST00000428848 SLC1A3P43003 542 aa8.27□□□□□ -1.09
CDH13-202ENST00000428848 BTG1P62324 171 aa8.27□□□□□ -1.09
CDH13-202ENST00000428848 REEP5Q00765 189 aa8.27□□□□□ -1.09
CDH13-202ENST00000428848 DBPQ10586 325 aaPredicted RBP8.27□□□□□ -1.09
CDH13-202ENST00000428848 SPDYE7PQ495Y7 208 aa8.27□□□□□ -1.09
CDH13-202ENST00000428848 EOGTQ5NDL2 527 aa8.27□□□□□ -1.09
CDH13-202ENST00000428848 AADACL4Q5VUY2 407 aa8.27□□□□□ -1.09
CDH13-202ENST00000428848 BICRALQ6AI39 1079 aa8.27□□□□□ -1.09
CDH13-202ENST00000428848 SLC27A4Q6P1M0 643 aa8.27□□□□□ -1.09
CDH13-202ENST00000428848 RASSF6Q6ZTQ3 369 aa8.27□□□□□ -1.09
CDH13-202ENST00000428848 ZNF765Q7L2R6 523 aa8.27□□□□□ -1.09
CDH13-202ENST00000428848 DENND4AQ7Z401 1863 aa8.27□□□□□ -1.09
CDH13-202ENST00000428848 KRT77Q7Z794 578 aa8.27□□□□□ -1.09
CDH13-202ENST00000428848 PIAS4Q8N2W9 510 aaPredicted RBP8.27□□□□□ -1.09
CDH13-202ENST00000428848 SPPL3Q8TCT6 385 aa8.27□□□□□ -1.09
CDH13-202ENST00000428848 GNPDA2Q8TDQ7 276 aa8.27□□□□□ -1.09
CDH13-202ENST00000428848 ZNF431Q8TF32 576 aaPredicted RBP8.27□□□□□ -1.09
CDH13-202ENST00000428848 SLC9A6Q92581 669 aa8.27□□□□□ -1.09
CDH13-202ENST00000428848 RBPMSQ93062 196 aaKnown RBP8.27□□□□□ -1.09
CDH13-202ENST00000428848 RAD51AP1Q96B01 352 aa8.27□□□□□ -1.09
CDH13-202ENST00000428848 EXOSC8Q96B26 276 aaKnown RBP8.27□□□□□ -1.09
CDH13-202ENST00000428848 TCEAL4Q96EI5 215 aa8.27□□□□□ -1.09
CDH13-202ENST00000428848 CHFRQ96EP1 664 aa8.27□□□□□ -1.09
CDH13-202ENST00000428848 SLC35G5Q96KT7 338 aa8.27□□□□□ -1.09
CDH13-202ENST00000428848 UBL7Q96S82 380 aaPredicted RBP8.27□□□□□ -1.09
CDH13-202ENST00000428848 SECISBP2Q96T21 854 aaKnown RBP8.27□□□□□ -1.09
CDH13-202ENST00000428848 NOTCH4Q99466 2003 aa8.27□□□□□ -1.09
CDH13-202ENST00000428848 JAM3Q9BX67 310 aa8.27□□□□□ -1.09
CDH13-202ENST00000428848 RNF32Q9H0A6 362 aa8.27□□□□□ -1.09
CDH13-202ENST00000428848 LINC00597Q9H2U6 94 aa8.27□□□□□ -1.09
CDH13-202ENST00000428848 GLIPR2Q9H4G4 154 aa8.27□□□□□ -1.09
CDH13-202ENST00000428848 RERGLQ9H628 205 aa8.27□□□□□ -1.09
CDH13-202ENST00000428848 HEXA-AS1Q9H8Q6 139 aa8.27□□□□□ -1.09
CDH13-202ENST00000428848 EMC7Q9NPA0 242 aa8.27□□□□□ -1.09
CDH13-202ENST00000428848 EVA1BQ9NVM1 165 aa8.27□□□□□ -1.09
CDH13-202ENST00000428848 GLS2Q9UI32 602 aa8.27□□□□□ -1.09
CDH13-202ENST00000428848 ADAM29Q9UKF5 820 aa8.27□□□□□ -1.09
CDH13-202ENST00000428848 GPR34Q9UPC5 381 aa8.27□□□□□ -1.09
CDH13-202ENST00000428848 EXOGQ9Y2C4 368 aaKnown RBP8.27□□□□□ -1.09
CDH13-202ENST00000428848 STON1Q9Y6Q2 735 aa8.27□□□□□ -1.09
CDH13-202ENST00000428848 A8MUA0 341 aa8.27□□□□□ -1.09
CDH13-202ENST00000428848 HIDE1A8MVS5 230 aa8.27□□□□□ -1.09
CDH13-202ENST00000428848 SMLR1H3BR10 107 aa8.27□□□□□ -1.09
CDH13-202ENST00000428848 GABRPO00591 440 aa8.27□□□□□ -1.09
CDH13-202ENST00000428848 CASKO14936 926 aa8.27□□□□□ -1.09
CDH13-202ENST00000428848 CASC3O15234 703 aaKnown RBP8.27□□□□□ -1.09
CDH13-202ENST00000428848 NFATC1O95644 943 aa8.27□□□□□ -1.09
CDH13-202ENST00000428848 IGHA1P01876 353 aa8.27□□□□□ -1.09
CDH13-202ENST00000428848 HLA-DPB1P04440 258 aa8.27□□□□□ -1.09
CDH13-202ENST00000428848 NR2F1P10589 423 aa8.27□□□□□ -1.09
CDH13-202ENST00000428848 ADH5P11766 374 aa8.27□□□□□ -1.09
CDH13-202ENST00000428848 HK1P19367 917 aa8.27□□□□□ -1.09
CDH13-202ENST00000428848 GALP22466 123 aa8.27□□□□□ -1.09
CDH13-202ENST00000428848 KELP23276 732 aa8.27□□□□□ -1.09
CDH13-202ENST00000428848 EVI2BP34910 448 aa8.27□□□□□ -1.09
CDH13-202ENST00000428848 TRIM23P36406 574 aa8.27□□□□□ -1.09
CDH13-202ENST00000428848 CLCNKAP51800 687 aa8.27□□□□□ -1.09
CDH13-202ENST00000428848 AGFG1P52594 562 aaKnown RBP8.27□□□□□ -1.09
CDH13-202ENST00000428848 TRA2BP62995 288 aaKnown RBP8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms