RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 C1GALT1C1Q96EU7 318 aa16.43■□□□□ 0.22
UPK3BP1-201ENST00000428678 RAB17Q9H0T7 212 aa16.43■□□□□ 0.22
UPK3BP1-201ENST00000428678 ABCG2Q9UNQ0 655 aa16.43■□□□□ 0.22
UPK3BP1-201ENST00000428678 GMFGO60234 142 aa16.42■□□□□ 0.22
UPK3BP1-201ENST00000428678 EIF1AXP47813 144 aaKnown RBP16.42■□□□□ 0.22
UPK3BP1-201ENST00000428678 SLC6A8P48029 635 aa16.42■□□□□ 0.22
UPK3BP1-201ENST00000428678 CLEC12BQ2HXU8 276 aa16.42■□□□□ 0.22
UPK3BP1-201ENST00000428678 TCHHL1Q5QJ38 904 aaPredicted RBP16.42■□□□□ 0.22
UPK3BP1-201ENST00000428678 HEPHL1Q6MZM0 1159 aa16.42■□□□□ 0.22
UPK3BP1-201ENST00000428678 ALKBH2Q6NS38 261 aa16.42■□□□□ 0.22
UPK3BP1-201ENST00000428678 STAC2Q6ZMT1 411 aa16.42■□□□□ 0.22
UPK3BP1-201ENST00000428678 OR6K3Q8NGY3 331 aa16.42■□□□□ 0.22
UPK3BP1-201ENST00000428678 DUSP19Q8WTR2 217 aa16.42■□□□□ 0.22
UPK3BP1-201ENST00000428678 BBS4Q96RK4 519 aa16.42■□□□□ 0.22
UPK3BP1-201ENST00000428678 RTN4RQ9BZR6 473 aa16.42■□□□□ 0.22
UPK3BP1-201ENST00000428678 SLC35C2Q9NQQ7 365 aa16.42■□□□□ 0.22
UPK3BP1-201ENST00000428678 PLSCR4Q9NRQ2 329 aa16.42■□□□□ 0.22
UPK3BP1-201ENST00000428678 LAMP3Q9UQV4 416 aa16.42■□□□□ 0.22
UPK3BP1-201ENST00000428678 AP4B1Q9Y6B7 739 aa16.42■□□□□ 0.22
UPK3BP1-201ENST00000428678 SHISA8B8ZZ34 492 aa16.41■□□□□ 0.22
UPK3BP1-201ENST00000428678 MANBAO00462 879 aa16.41■□□□□ 0.22
UPK3BP1-201ENST00000428678 EIF1AYO14602 144 aaKnown RBP16.41■□□□□ 0.22
UPK3BP1-201ENST00000428678 COQ9O75208 318 aa16.41■□□□□ 0.22
UPK3BP1-201ENST00000428678 SOX30O94993 753 aa16.41■□□□□ 0.22
UPK3BP1-201ENST00000428678 OR4F21O95013 312 aa16.41■□□□□ 0.22
UPK3BP1-201ENST00000428678 TP53P04637 393 aaPredicted RBP16.41■□□□□ 0.22
UPK3BP1-201ENST00000428678 CHN1P15882 459 aa16.41■□□□□ 0.22
UPK3BP1-201ENST00000428678 MPIP34949 423 aa16.41■□□□□ 0.22
UPK3BP1-201ENST00000428678 RFX3P48380 749 aa16.41■□□□□ 0.22
UPK3BP1-201ENST00000428678 CLK3P49761 638 aaKnown RBP16.41■□□□□ 0.22
UPK3BP1-201ENST00000428678 RPS4XP62701 263 aaKnown RBP16.41■□□□□ 0.22
UPK3BP1-201ENST00000428678 PSG6Q00889 435 aa16.41■□□□□ 0.22
UPK3BP1-201ENST00000428678 OCRLQ01968 901 aa16.41■□□□□ 0.22
UPK3BP1-201ENST00000428678 HEPACAMQ14CZ8 416 aa16.41■□□□□ 0.22
UPK3BP1-201ENST00000428678 TSNAXIP1Q2TAA8 658 aa16.41■□□□□ 0.22
UPK3BP1-201ENST00000428678 CYP27C1Q4G0S4 372 aa16.41■□□□□ 0.22
UPK3BP1-201ENST00000428678 HMBOX1Q6NT76 420 aa16.41■□□□□ 0.22
UPK3BP1-201ENST00000428678 MARCH3Q86UD3 253 aa16.41■□□□□ 0.22
UPK3BP1-201ENST00000428678 CDYL2Q8N8U2 506 aa16.41■□□□□ 0.22
UPK3BP1-201ENST00000428678 AKAP1Q92667 903 aaKnown RBP eCLIP16.41■□□□□ 0.22
UPK3BP1-201ENST00000428678 ACTR6Q9GZN1 396 aa16.41■□□□□ 0.22
UPK3BP1-201ENST00000428678 FANCFQ9NPI8 374 aa16.41■□□□□ 0.22
UPK3BP1-201ENST00000428678 FAM120CQ9NX05 1096 aaKnown RBP16.41■□□□□ 0.22
UPK3BP1-201ENST00000428678 ZNF225Q9UK10 706 aa16.41■□□□□ 0.22
UPK3BP1-201ENST00000428678 CR1P17927 2039 aa16.41■□□□□ 0.22
UPK3BP1-201ENST00000428678 CUBNO60494 3623 aa16.4■□□□□ 0.22
UPK3BP1-201ENST00000428678 KRT6AP02538 564 aa16.4■□□□□ 0.22
UPK3BP1-201ENST00000428678 KRT6BP04259 564 aa16.4■□□□□ 0.22
UPK3BP1-201ENST00000428678 HSD3B1P14060 373 aa16.4■□□□□ 0.22
UPK3BP1-201ENST00000428678 HSD3B2P26439 372 aa16.4■□□□□ 0.22
UPK3BP1-201ENST00000428678 KRT6CP48668 564 aa16.4■□□□□ 0.22
UPK3BP1-201ENST00000428678 RAE1P78406 368 aaKnown RBP16.4■□□□□ 0.22
UPK3BP1-201ENST00000428678 CSTF3Q12996 717 aaKnown RBP16.4■□□□□ 0.22
UPK3BP1-201ENST00000428678 DECR1Q16698 335 aa16.4■□□□□ 0.22
UPK3BP1-201ENST00000428678 GLYR1Q49A26 553 aaPredicted RBP16.4■□□□□ 0.22
UPK3BP1-201ENST00000428678 GGNQ86UU5 652 aa16.4■□□□□ 0.22
UPK3BP1-201ENST00000428678 C16orf78Q8WTQ4 265 aa16.4■□□□□ 0.22
UPK3BP1-201ENST00000428678 GMPPAQ96IJ6 420 aaPredicted RBP16.4■□□□□ 0.22
UPK3BP1-201ENST00000428678 TMEM204Q9BSN7 226 aa16.4■□□□□ 0.22
UPK3BP1-201ENST00000428678 STOML1Q9UBI4 398 aa16.4■□□□□ 0.22
UPK3BP1-201ENST00000428678 CADP27708 2225 aa16.39■□□□□ 0.22
UPK3BP1-201ENST00000428678 A8MT66 165 aa16.39■□□□□ 0.21
UPK3BP1-201ENST00000428678 SS18L1O75177 396 aaPredicted RBP16.39■□□□□ 0.21
UPK3BP1-201ENST00000428678 PHBP35232 272 aa16.39■□□□□ 0.21
UPK3BP1-201ENST00000428678 ACSM2AQ08AH3 577 aa16.39■□□□□ 0.21
UPK3BP1-201ENST00000428678 CTU2Q2VPK5 515 aaKnown RBP16.39■□□□□ 0.21
UPK3BP1-201ENST00000428678 ACSM2BQ68CK6 577 aa16.39■□□□□ 0.21
UPK3BP1-201ENST00000428678 STK32CQ86UX6 486 aa16.39■□□□□ 0.21
UPK3BP1-201ENST00000428678 TRMT61AQ96FX7 289 aaKnown RBP16.39■□□□□ 0.21
UPK3BP1-201ENST00000428678 MRPL57Q9BQC6 102 aaKnown RBP16.39■□□□□ 0.21
UPK3BP1-201ENST00000428678 EBPLQ9BY08 206 aa16.39■□□□□ 0.21
UPK3BP1-201ENST00000428678 REG4Q9BYZ8 158 aa16.39■□□□□ 0.21
UPK3BP1-201ENST00000428678 ACPTQ9BZG2 426 aa16.39■□□□□ 0.21
UPK3BP1-201ENST00000428678 TBL1XR1Q9BZK7 514 aa16.39■□□□□ 0.21
UPK3BP1-201ENST00000428678 MRPL46Q9H2W6 279 aaKnown RBP16.39■□□□□ 0.21
UPK3BP1-201ENST00000428678 ACSS3Q9H6R3 686 aa16.39■□□□□ 0.21
UPK3BP1-201ENST00000428678 Q9N2J8 555 aa16.39■□□□□ 0.21
UPK3BP1-201ENST00000428678 DMGDHQ9UI17 866 aaKnown RBP16.39■□□□□ 0.21
UPK3BP1-201ENST00000428678 MCTS1Q9ULC4 181 aaKnown RBP16.39■□□□□ 0.21
UPK3BP1-201ENST00000428678 NFU1Q9UMS0 254 aa16.39■□□□□ 0.21
UPK3BP1-201ENST00000428678 VDAC3Q9Y277 283 aa16.39■□□□□ 0.21
UPK3BP1-201ENST00000428678 SYNGR4O95473 234 aa16.38■□□□□ 0.21
UPK3BP1-201ENST00000428678 IFNA2P01563 188 aa16.38■□□□□ 0.21
UPK3BP1-201ENST00000428678 JUNP05412 331 aaKnown RBP16.38■□□□□ 0.21
UPK3BP1-201ENST00000428678 INHBAP08476 426 aa16.38■□□□□ 0.21
UPK3BP1-201ENST00000428678 HSD17B3P37058 310 aa16.38■□□□□ 0.21
UPK3BP1-201ENST00000428678 MAGEA12P43365 314 aa16.38■□□□□ 0.21
UPK3BP1-201ENST00000428678 NCBP2P52298 156 aaKnown RBP eCLIP16.38■□□□□ 0.21
UPK3BP1-201ENST00000428678 RASA2Q15283 850 aa16.38■□□□□ 0.21
UPK3BP1-201ENST00000428678 ZNHIT3Q15649 155 aaPredicted RBP16.38■□□□□ 0.21
UPK3BP1-201ENST00000428678 ETFDHQ16134 617 aa16.38■□□□□ 0.21
UPK3BP1-201ENST00000428678 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.38■□□□□ 0.21
UPK3BP1-201ENST00000428678 SPIN4Q56A73 249 aa16.38■□□□□ 0.21
UPK3BP1-201ENST00000428678 UBAP2Q5T6F2 1119 aaKnown RBP16.38■□□□□ 0.21
UPK3BP1-201ENST00000428678 PODNL1Q6PEZ8 512 aa16.38■□□□□ 0.21
UPK3BP1-201ENST00000428678 TMEM107Q6UX40 140 aa16.38■□□□□ 0.21
UPK3BP1-201ENST00000428678 BEND4Q6ZU67 534 aa16.38■□□□□ 0.21
UPK3BP1-201ENST00000428678 PHC2Q8IXK0 858 aa16.38■□□□□ 0.21
UPK3BP1-201ENST00000428678 OR10D3Q8NH80 312 aa16.38■□□□□ 0.21
UPK3BP1-201ENST00000428678 CDC26Q8NHZ8 85 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms