RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 NUBP1P53384 320 aa14.09□□□□□ -0.15
ACTB-204ENST00000425660 NSDHLQ15738 373 aa14.09□□□□□ -0.15
ACTB-204ENST00000425660 DCST1Q5T197 706 aa14.09□□□□□ -0.15
ACTB-204ENST00000425660 PHF19Q5T6S3 580 aa14.09□□□□□ -0.15
ACTB-204ENST00000425660 LAPTM4BQ86VI4 370 aa14.09□□□□□ -0.15
ACTB-204ENST00000425660 TMEM151BQ8IW70 566 aa14.09□□□□□ -0.15
ACTB-204ENST00000425660 ZNF786Q8N393 782 aa14.09□□□□□ -0.15
ACTB-204ENST00000425660 BMPERQ8N8U9 685 aa14.09□□□□□ -0.15
ACTB-204ENST00000425660 ZSCAN1Q8NBB4 408 aa14.09□□□□□ -0.15
ACTB-204ENST00000425660 DIO2Q92813 273 aa14.09□□□□□ -0.15
ACTB-204ENST00000425660 MRPS26Q9BYN8 205 aaKnown RBP14.09□□□□□ -0.15
ACTB-204ENST00000425660 SLC7A5P2Q9GIP4 190 aa14.09□□□□□ -0.15
ACTB-204ENST00000425660 RIBC2Q9H4K1 309 aa14.09□□□□□ -0.15
ACTB-204ENST00000425660 ANKRD19PQ9H560 264 aa14.09□□□□□ -0.15
ACTB-204ENST00000425660 TMCC3Q9ULS5 477 aa14.09□□□□□ -0.15
ACTB-204ENST00000425660 R4GN57 208 aa14.09□□□□□ -0.15
ACTB-204ENST00000425660 NUP210LQ5VU65 1888 aa14.09□□□□□ -0.15
ACTB-204ENST00000425660 FER1L5A0AVI2 2057 aa14.09□□□□□ -0.15
ACTB-204ENST00000425660 SH3PXD2BA1X283 911 aa14.08□□□□□ -0.15
ACTB-204ENST00000425660 CLDN24A6NM45 220 aa14.08□□□□□ -0.15
ACTB-204ENST00000425660 PRR33A8MZF0 331 aa14.08□□□□□ -0.15
ACTB-204ENST00000425660 PEX12O00623 359 aa14.08□□□□□ -0.15
ACTB-204ENST00000425660 DDAH2O95865 285 aa14.08□□□□□ -0.15
ACTB-204ENST00000425660 ADAP00813 363 aa14.08□□□□□ -0.15
ACTB-204ENST00000425660 EPHA2P29317 976 aa14.08□□□□□ -0.15
ACTB-204ENST00000425660 RAPSNQ13702 412 aa14.08□□□□□ -0.15
ACTB-204ENST00000425660 SEC23BQ15437 767 aa14.08□□□□□ -0.15
ACTB-204ENST00000425660 NKAIN1Q4KMZ8 207 aa14.08□□□□□ -0.15
ACTB-204ENST00000425660 FGD3Q5JSP0 725 aa14.08□□□□□ -0.15
ACTB-204ENST00000425660 MFSD4BQ5TF39 518 aa14.08□□□□□ -0.15
ACTB-204ENST00000425660 LAIR1Q6GTX8 287 aa14.08□□□□□ -0.15
ACTB-204ENST00000425660 PRR23CQ6ZRP0 262 aa14.08□□□□□ -0.15
ACTB-204ENST00000425660 B3GNT8Q7Z7M8 397 aa14.08□□□□□ -0.15
ACTB-204ENST00000425660 ZAR1Q86SH2 424 aa14.08□□□□□ -0.15
ACTB-204ENST00000425660 AQP11Q8NBQ7 271 aa14.08□□□□□ -0.15
ACTB-204ENST00000425660 OR4N2Q8NGD1 307 aa14.08□□□□□ -0.15
ACTB-204ENST00000425660 STT3BQ8TCJ2 826 aa14.08□□□□□ -0.15
ACTB-204ENST00000425660 HRASLS5Q96KN8 279 aa14.08□□□□□ -0.15
ACTB-204ENST00000425660 SLC46A1Q96NT5 459 aa14.08□□□□□ -0.15
ACTB-204ENST00000425660 FNDC11Q9BVV2 318 aa14.08□□□□□ -0.15
ACTB-204ENST00000425660 ZNF556Q9HAH1 456 aa14.08□□□□□ -0.15
ACTB-204ENST00000425660 PNO1Q9NRX1 252 aaKnown RBP14.08□□□□□ -0.15
ACTB-204ENST00000425660 C14orf105Q9NVL8 296 aa14.08□□□□□ -0.15
ACTB-204ENST00000425660 OCIAD1Q9NX40 245 aa14.08□□□□□ -0.15
ACTB-204ENST00000425660 MKL2Q9ULH7 1088 aa14.08□□□□□ -0.15
ACTB-204ENST00000425660 CFL2Q9Y281 166 aa14.08□□□□□ -0.15
ACTB-204ENST00000425660 CLCA3PQ9Y6N3 262 aa14.08□□□□□ -0.15
ACTB-204ENST00000425660 ZNF318Q5VUA4 2279 aa14.08□□□□□ -0.16
ACTB-204ENST00000425660 TRIM64CA6NLI5 447 aa14.08□□□□□ -0.16
ACTB-204ENST00000425660 NPIPB9F8W1W9 429 aa14.08□□□□□ -0.16
ACTB-204ENST00000425660 SEC24DO94855 1032 aaPredicted RBP14.08□□□□□ -0.16
ACTB-204ENST00000425660 SLC34A2O95436 690 aa14.08□□□□□ -0.16
ACTB-204ENST00000425660 CLPTM1O96005 669 aa14.08□□□□□ -0.16
ACTB-204ENST00000425660 GASTP01350 101 aa14.08□□□□□ -0.16
ACTB-204ENST00000425660 IGKV1D-16P01601 117 aa14.08□□□□□ -0.16
ACTB-204ENST00000425660 TFAP2AP05549 437 aa14.08□□□□□ -0.16
ACTB-204ENST00000425660 CSTF2P33240 577 aaKnown RBP eCLIP14.08□□□□□ -0.16
ACTB-204ENST00000425660 ZNF136P52737 540 aa14.08□□□□□ -0.16
ACTB-204ENST00000425660 RGS8P57771 180 aaPredicted RBP14.08□□□□□ -0.16
ACTB-204ENST00000425660 TUBA4AP68366 448 aa14.08□□□□□ -0.16
ACTB-204ENST00000425660 DCDP81605 110 aaKnown RBP14.08□□□□□ -0.16
ACTB-204ENST00000425660 FLYWCH1Q4VC44 716 aa14.08□□□□□ -0.16
ACTB-204ENST00000425660 LINC00471Q8N535 108 aa14.08□□□□□ -0.16
ACTB-204ENST00000425660 AGBL5Q8NDL9 886 aa14.08□□□□□ -0.16
ACTB-204ENST00000425660 SETD9Q8NE22 299 aa14.08□□□□□ -0.16
ACTB-204ENST00000425660 TSPAN14Q8NG11 270 aa14.08□□□□□ -0.16
ACTB-204ENST00000425660 OR14A16Q8NHC5 309 aa14.08□□□□□ -0.16
ACTB-204ENST00000425660 SLC2A12Q8TD20 617 aa14.08□□□□□ -0.16
ACTB-204ENST00000425660 RHBDD1Q8TEB9 315 aa14.08□□□□□ -0.16
ACTB-204ENST00000425660 ZNF721Q8TF20 911 aa14.08□□□□□ -0.16
ACTB-204ENST00000425660 DAZLQ92904 295 aaKnown RBP14.08□□□□□ -0.16
ACTB-204ENST00000425660 LRFN3Q9BTN0 628 aa14.08□□□□□ -0.16
ACTB-204ENST00000425660 G6PC3Q9BUM1 346 aa14.08□□□□□ -0.16
ACTB-204ENST00000425660 ITPAQ9BY32 194 aa14.08□□□□□ -0.16
ACTB-204ENST00000425660 POLR2J2Q9GZM3 115 aaKnown RBP14.08□□□□□ -0.16
ACTB-204ENST00000425660 ING2Q9H160 280 aa14.08□□□□□ -0.16
ACTB-204ENST00000425660 POLR2J3Q9H1A7 115 aaKnown RBP14.08□□□□□ -0.16
ACTB-204ENST00000425660 EVA1AQ9H8M9 152 aa14.08□□□□□ -0.16
ACTB-204ENST00000425660 ENOPH1Q9UHY7 261 aa14.08□□□□□ -0.16
ACTB-204ENST00000425660 PCDHGA10Q9Y5H3 936 aa14.08□□□□□ -0.16
ACTB-204ENST00000425660 ASCC3Q8N3C0 2202 aaKnown RBP14.07□□□□□ -0.16
ACTB-204ENST00000425660 FRS3O43559 492 aa14.07□□□□□ -0.16
ACTB-204ENST00000425660 ZGLP1P0C6A0 271 aa14.07□□□□□ -0.16
ACTB-204ENST00000425660 CYP4B1P13584 511 aa14.07□□□□□ -0.16
ACTB-204ENST00000425660 IL1RL1Q01638 556 aa14.07□□□□□ -0.16
ACTB-204ENST00000425660 CD47Q08722 323 aa14.07□□□□□ -0.16
ACTB-204ENST00000425660 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.07□□□□□ -0.161e-17■■□□□ 12.5
ACTB-204ENST00000425660 MRPL2Q5T653 305 aaKnown RBP14.07□□□□□ -0.16
ACTB-204ENST00000425660 GRAMD2AQ8IUY3 354 aa14.07□□□□□ -0.16
ACTB-204ENST00000425660 APLFQ8IW19 511 aaPredicted RBP14.07□□□□□ -0.16
ACTB-204ENST00000425660 MORN4Q8NDC4 146 aa14.07□□□□□ -0.16
ACTB-204ENST00000425660 CLIP3Q96DZ5 547 aa14.07□□□□□ -0.16
ACTB-204ENST00000425660 DGCR6LQ9BY27 220 aa14.07□□□□□ -0.16
ACTB-204ENST00000425660 ARMC7Q9H6L4 198 aa14.07□□□□□ -0.16
ACTB-204ENST00000425660 APMAPQ9HDC9 416 aa14.07□□□□□ -0.16
ACTB-204ENST00000425660 CBLCQ9ULV8 474 aa14.07□□□□□ -0.16
ACTB-204ENST00000425660 MGAT4BQ9UQ53 548 aa14.07□□□□□ -0.16
ACTB-204ENST00000425660 VSTM2BA6NLU5 285 aa14.06□□□□□ -0.16
ACTB-204ENST00000425660 AP3D1O14617 1153 aa14.06□□□□□ -0.16
ACTB-204ENST00000425660 CDX4O14627 284 aaPredicted RBP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms