RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 PLD2O14939 933 aa9.98□□□□□ -0.81
CUX1-205ENST00000425244 GUCY1B2O75343 617 aa9.98□□□□□ -0.81
CUX1-205ENST00000425244 ALPPP05187 535 aa9.98□□□□□ -0.81
CUX1-205ENST00000425244 TSPAN19P0C672 248 aa9.98□□□□□ -0.81
CUX1-205ENST00000425244 PEBP1P30086 187 aaKnown RBP9.98□□□□□ -0.81
CUX1-205ENST00000425244 RORCP51449 518 aa9.98□□□□□ -0.81
CUX1-205ENST00000425244 SMSP52788 366 aa9.98□□□□□ -0.81
CUX1-205ENST00000425244 NKX2-5P52952 324 aaPredicted RBP9.98□□□□□ -0.81
CUX1-205ENST00000425244 SRP54P61011 504 aaKnown RBP9.98□□□□□ -0.81
CUX1-205ENST00000425244 COX10Q12887 443 aa9.98□□□□□ -0.81
CUX1-205ENST00000425244 GNA13Q14344 377 aa9.98□□□□□ -0.81
CUX1-205ENST00000425244 RPE65Q16518 533 aa9.98□□□□□ -0.81
CUX1-205ENST00000425244 OCLNQ16625 522 aa9.98□□□□□ -0.81
CUX1-205ENST00000425244 ZMAT1Q5H9K5 638 aa9.98□□□□□ -0.81
CUX1-205ENST00000425244 C22orf42Q6IC83 251 aa9.98□□□□□ -0.81
CUX1-205ENST00000425244 GRAMD2AQ8IUY3 354 aa9.98□□□□□ -0.81
CUX1-205ENST00000425244 LAX1Q8IWV1 398 aa9.98□□□□□ -0.81
CUX1-205ENST00000425244 SPEM1Q8N4L4 309 aa9.98□□□□□ -0.81
CUX1-205ENST00000425244 FAM26EQ8N5C1 309 aa9.98□□□□□ -0.81
CUX1-205ENST00000425244 GATAD2BQ8WXI9 593 aa9.98□□□□□ -0.81
CUX1-205ENST00000425244 PIK3R3Q92569 461 aa9.98□□□□□ -0.81
CUX1-205ENST00000425244 RNFT2Q96EX2 444 aa9.98□□□□□ -0.81
CUX1-205ENST00000425244 HSPA12BQ96MM6 686 aa9.98□□□□□ -0.81
CUX1-205ENST00000425244 TIMM29Q9BSF4 260 aa9.98□□□□□ -0.81
CUX1-205ENST00000425244 RAB11FIP5Q9BXF6 653 aa9.98□□□□□ -0.81
CUX1-205ENST00000425244 BCL2L10Q9HD36 194 aa9.98□□□□□ -0.81
CUX1-205ENST00000425244 NDUFB11Q9NX14 153 aa9.98□□□□□ -0.81
CUX1-205ENST00000425244 APOBEC3BQ9UH17 382 aaKnown RBP9.98□□□□□ -0.81
CUX1-205ENST00000425244 C19orf67A6NJJ6 358 aa9.98□□□□□ -0.81
CUX1-205ENST00000425244 CLEC2LP0C7M8 214 aa9.98□□□□□ -0.81
CUX1-205ENST00000425244 MSL3P1P0C860 447 aa9.98□□□□□ -0.81
CUX1-205ENST00000425244 MPIP34949 423 aa9.98□□□□□ -0.81
CUX1-205ENST00000425244 MAN2A2P49641 1150 aa9.98□□□□□ -0.81
CUX1-205ENST00000425244 CTAG1AP78358 180 aa9.98□□□□□ -0.81
CUX1-205ENST00000425244 TGM3Q08188 693 aa9.98□□□□□ -0.81
CUX1-205ENST00000425244 NDUFA9Q16795 377 aa9.98□□□□□ -0.81
CUX1-205ENST00000425244 ALG11Q2TAA5 492 aa9.98□□□□□ -0.81
CUX1-205ENST00000425244 SLC48A1Q6P1K1 146 aa9.98□□□□□ -0.81
CUX1-205ENST00000425244 TMEM64Q6YI46 380 aa9.98□□□□□ -0.81
CUX1-205ENST00000425244 TMPRSS11AQ6ZMR5 421 aa9.98□□□□□ -0.81
CUX1-205ENST00000425244 PRICKLE2Q7Z3G6 844 aa9.98□□□□□ -0.81
CUX1-205ENST00000425244 SFTPA2Q8IWL1 248 aa9.98□□□□□ -0.81
CUX1-205ENST00000425244 ZFP41Q8N8Y5 198 aa9.98□□□□□ -0.81
CUX1-205ENST00000425244 SPERTQ8NA61 448 aa9.98□□□□□ -0.81
CUX1-205ENST00000425244 KCT2Q8NC54 265 aa9.98□□□□□ -0.81
CUX1-205ENST00000425244 SDHCQ99643 169 aaPredicted RBP9.98□□□□□ -0.81
CUX1-205ENST00000425244 CHRDQ9H2X0 955 aa9.98□□□□□ -0.81
CUX1-205ENST00000425244 IL20RAQ9UHF4 553 aa9.98□□□□□ -0.81
CUX1-205ENST00000425244 ZNF780BQ9Y6R6 833 aa9.98□□□□□ -0.81
CUX1-205ENST00000425244 A0A0G2JPF8 293 aa9.97□□□□□ -0.81
CUX1-205ENST00000425244 LOC105371267A0A1B0GV96 52 aa9.97□□□□□ -0.81
CUX1-205ENST00000425244 HYKKA2RU49 373 aa9.97□□□□□ -0.81
CUX1-205ENST00000425244 ANKRD34BA5PLL1 514 aa9.97□□□□□ -0.81
CUX1-205ENST00000425244 HNRNPCL2B2RXH8 293 aa9.97□□□□□ -0.81
CUX1-205ENST00000425244 GPR89AB7ZAQ6 455 aa9.97□□□□□ -0.81
CUX1-205ENST00000425244 HNRNPCL3B7ZW38 293 aa9.97□□□□□ -0.81
CUX1-205ENST00000425244 BTN3A3O00478 584 aa9.97□□□□□ -0.81
CUX1-205ENST00000425244 EMC8O43402 210 aa9.97□□□□□ -0.81
CUX1-205ENST00000425244 ASNA1O43681 348 aa9.97□□□□□ -0.81
CUX1-205ENST00000425244 CELA2BP08218 269 aaPredicted RBP9.97□□□□□ -0.81
CUX1-205ENST00000425244 CCNYL3P0C7X3 344 aa9.97□□□□□ -0.81
CUX1-205ENST00000425244 GPR89BP0CG08 455 aa9.97□□□□□ -0.81
CUX1-205ENST00000425244 HNRNPCL4P0DMR1 293 aa9.97□□□□□ -0.81
CUX1-205ENST00000425244 F3P13726 295 aa9.97□□□□□ -0.81
CUX1-205ENST00000425244 ENPP1P22413 925 aa9.97□□□□□ -0.81
CUX1-205ENST00000425244 CMPK1P30085 196 aa9.97□□□□□ -0.81
CUX1-205ENST00000425244 RNF144AP50876 292 aaPredicted RBP9.97□□□□□ -0.81
CUX1-205ENST00000425244 DAB2P98082 770 aa9.97□□□□□ -0.81
CUX1-205ENST00000425244 MLLT11Q13015 90 aaPredicted RBP9.97□□□□□ -0.81
CUX1-205ENST00000425244 HNRNPA0Q13151 305 aaKnown RBP9.97□□□□□ -0.81
CUX1-205ENST00000425244 NDUFA5Q16718 116 aa9.97□□□□□ -0.81
CUX1-205ENST00000425244 WDR45BQ5MNZ6 344 aa9.97□□□□□ -0.81
CUX1-205ENST00000425244 C6orf132Q5T0Z8 1188 aa9.97□□□□□ -0.81
CUX1-205ENST00000425244 C1orf94Q6P1W5 598 aa9.97□□□□□ -0.81
CUX1-205ENST00000425244 OR4N5Q8IXE1 308 aa9.97□□□□□ -0.81
CUX1-205ENST00000425244 ZCCHC10Q8TBK6 192 aa9.97□□□□□ -0.81
CUX1-205ENST00000425244 LCN9Q8WX39 176 aa9.97□□□□□ -0.81
CUX1-205ENST00000425244 PATE1Q8WXA2 126 aa9.97□□□□□ -0.81
CUX1-205ENST00000425244 OTULINQ96BN8 352 aa9.97□□□□□ -0.81
CUX1-205ENST00000425244 C1GALT1C1Q96EU7 318 aa9.97□□□□□ -0.81
CUX1-205ENST00000425244 PINK1Q9BXM7 581 aa9.97□□□□□ -0.81
CUX1-205ENST00000425244 SAP130Q9H0E3 1048 aa9.97□□□□□ -0.81
CUX1-205ENST00000425244 RACGAP1Q9H0H5 632 aa9.97□□□□□ -0.81
CUX1-205ENST00000425244 C3orf14Q9HBI5 128 aa9.97□□□□□ -0.81
CUX1-205ENST00000425244 SEMA4GQ9NTN9 838 aa9.97□□□□□ -0.81
CUX1-205ENST00000425244 KLF15Q9UIH9 416 aa9.97□□□□□ -0.81
CUX1-205ENST00000425244 DIMT1Q9UNQ2 313 aaKnown RBP9.97□□□□□ -0.81
CUX1-205ENST00000425244 A0A075B6Q4 140 aa9.97□□□□□ -0.81
CUX1-205ENST00000425244 A0A1W2PPC4 97 aa9.97□□□□□ -0.81
CUX1-205ENST00000425244 NOTOA8MTQ0 251 aa9.97□□□□□ -0.81
CUX1-205ENST00000425244 ZNF670-ZNF695F2Z2N8 137 aa9.97□□□□□ -0.81
CUX1-205ENST00000425244 CASC3O15234 703 aaKnown RBP9.97□□□□□ -0.81
CUX1-205ENST00000425244 FCMRO60667 390 aa9.97□□□□□ -0.81
CUX1-205ENST00000425244 BCKDHBP21953 392 aa9.97□□□□□ -0.81
CUX1-205ENST00000425244 GPR4P46093 362 aa9.97□□□□□ -0.81
CUX1-205ENST00000425244 TAB1Q15750 504 aa9.97□□□□□ -0.81
CUX1-205ENST00000425244 TYW3Q6IPR3 259 aaKnown RBP9.97□□□□□ -0.81
CUX1-205ENST00000425244 SLC27A4Q6P1M0 643 aa9.97□□□□□ -0.81
CUX1-205ENST00000425244 LAPTM4BQ86VI4 370 aa9.97□□□□□ -0.81
CUX1-205ENST00000425244 OR8D4Q8NGM9 314 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms