RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 IFNEQ86WN2 208 aa13.79□□□□□ -0.2
USB1-202ENST00000423271 ZZZ3Q8IYH5 903 aa13.79□□□□□ -0.2
USB1-202ENST00000423271 C9orf106Q8NAJ2 232 aa13.79□□□□□ -0.2
USB1-202ENST00000423271 CLHC1Q8NHS4 586 aa13.79□□□□□ -0.2
USB1-202ENST00000423271 MBD3L2Q8NHZ7 208 aaPredicted RBP13.79□□□□□ -0.2
USB1-202ENST00000423271 CIDECQ96AQ7 238 aaPredicted RBP13.79□□□□□ -0.2
USB1-202ENST00000423271 ELP4Q96EB1 424 aa13.79□□□□□ -0.2
USB1-202ENST00000423271 METTL2AQ96IZ6 378 aaKnown RBP13.79□□□□□ -0.2
USB1-202ENST00000423271 FCRL1Q96LA6 429 aa13.79□□□□□ -0.2
USB1-202ENST00000423271 PPP1R36Q96LQ0 422 aa13.79□□□□□ -0.2
USB1-202ENST00000423271 TUBA1CQ9BQE3 449 aa13.79□□□□□ -0.2
USB1-202ENST00000423271 TAS2R10Q9NYW0 307 aa13.79□□□□□ -0.2
USB1-202ENST00000423271 WBP11Q9Y2W2 641 aaKnown RBP13.79□□□□□ -0.2
USB1-202ENST00000423271 H0Y3Z8 333 aa13.78□□□□□ -0.2
USB1-202ENST00000423271 KLF11O14901 512 aa13.78□□□□□ -0.2
USB1-202ENST00000423271 PDPK1O15530 556 aa13.78□□□□□ -0.2
USB1-202ENST00000423271 AKAP10O43572 662 aa13.78□□□□□ -0.2
USB1-202ENST00000423271 PEX11AO75192 247 aa13.78□□□□□ -0.2
USB1-202ENST00000423271 SLITRK5O94991 958 aa13.78□□□□□ -0.2
USB1-202ENST00000423271 SRD5A2P31213 254 aa13.78□□□□□ -0.2
USB1-202ENST00000423271 EVI2BP34910 448 aa13.78□□□□□ -0.2
USB1-202ENST00000423271 GCKP35557 465 aa13.78□□□□□ -0.2
USB1-202ENST00000423271 PSPHP78330 225 aa13.78□□□□□ -0.2
USB1-202ENST00000423271 SRYQ05066 204 aa13.78□□□□□ -0.2
USB1-202ENST00000423271 HSPB3Q12988 150 aa13.78□□□□□ -0.2
USB1-202ENST00000423271 GAB1Q13480 694 aa13.78□□□□□ -0.2
USB1-202ENST00000423271 SF3B4Q15427 424 aaKnown RBP eCLIP13.78□□□□□ -0.2
USB1-202ENST00000423271 RFTN2Q52LD8 501 aaPredicted RBP13.78□□□□□ -0.2
USB1-202ENST00000423271 LRRC8CQ8TDW0 803 aa13.78□□□□□ -0.2
USB1-202ENST00000423271 DYDC1Q8WWB3 177 aa13.78□□□□□ -0.2
USB1-202ENST00000423271 NRGNQ92686 78 aa13.78□□□□□ -0.2
USB1-202ENST00000423271 TUBGCP3Q96CW5 907 aa13.78□□□□□ -0.2
USB1-202ENST00000423271 TSSK3Q96PN8 268 aa13.78□□□□□ -0.2
USB1-202ENST00000423271 CCT7Q99832 543 aa13.78□□□□□ -0.2
USB1-202ENST00000423271 G6PC3Q9BUM1 346 aa13.78□□□□□ -0.2
USB1-202ENST00000423271 RTN4RQ9BZR6 473 aa13.78□□□□□ -0.2
USB1-202ENST00000423271 INTS9Q9NV88 658 aaKnown RBP13.78□□□□□ -0.2
USB1-202ENST00000423271 DKKL1Q9UK85 242 aa13.78□□□□□ -0.2
USB1-202ENST00000423271 CBLCQ9ULV8 474 aa13.78□□□□□ -0.2
USB1-202ENST00000423271 RPH3AQ9Y2J0 694 aaPredicted RBP13.78□□□□□ -0.2
USB1-202ENST00000423271 SYT5O00445 386 aa13.77□□□□□ -0.21
USB1-202ENST00000423271 ATP8B1O43520 1251 aa13.77□□□□□ -0.21
USB1-202ENST00000423271 FADS1O60427 444 aa13.77□□□□□ -0.21
USB1-202ENST00000423271 KITP10721 976 aa13.77□□□□□ -0.21
USB1-202ENST00000423271 CPN1P15169 458 aa13.77□□□□□ -0.21
USB1-202ENST00000423271 RFX3P48380 749 aa13.77□□□□□ -0.21
USB1-202ENST00000423271 LHX2P50458 406 aa13.77□□□□□ -0.21
USB1-202ENST00000423271 STX5Q13190 355 aa13.77□□□□□ -0.21
USB1-202ENST00000423271 RCAN2Q14206 197 aa13.77□□□□□ -0.21
USB1-202ENST00000423271 ATP6AP1LQ52LC2 224 aa13.77□□□□□ -0.21
USB1-202ENST00000423271 C6orf136Q5SQH8 315 aa13.77□□□□□ -0.21
USB1-202ENST00000423271 MED12LQ86YW9 2145 aa13.77□□□□□ -0.21
USB1-202ENST00000423271 HRNRQ86YZ3 2850 aaPredicted RBP13.77□□□□□ -0.21
USB1-202ENST00000423271 KIRREL3Q8IZU9 778 aa13.77□□□□□ -0.21
USB1-202ENST00000423271 ZPLD1Q8TCW7 415 aa13.77□□□□□ -0.21
USB1-202ENST00000423271 RNASE6Q93091 150 aaKnown RBP13.77□□□□□ -0.21
USB1-202ENST00000423271 PPP3R2Q96LZ3 170 aa13.77□□□□□ -0.21
USB1-202ENST00000423271 SFXN2Q96NB2 322 aa13.77□□□□□ -0.21
USB1-202ENST00000423271 LMF2Q9BU23 707 aaKnown RBP13.77□□□□□ -0.21
USB1-202ENST00000423271 NUF2Q9BZD4 464 aa13.77□□□□□ -0.21
USB1-202ENST00000423271 PCNX3Q9H6A9 2034 aa13.77□□□□□ -0.21
USB1-202ENST00000423271 CALHM2Q9HA72 323 aa13.77□□□□□ -0.21
USB1-202ENST00000423271 EQTNQ9NQ60 294 aa13.77□□□□□ -0.21
USB1-202ENST00000423271 CRIM1Q9NZV1 1036 aa13.77□□□□□ -0.21
USB1-202ENST00000423271 PPP4R1LQ9P1A2 415 aa13.77□□□□□ -0.21
USB1-202ENST00000423271 ZNF629Q9UEG4 869 aaPredicted RBP13.77□□□□□ -0.21
USB1-202ENST00000423271 MARCOQ9UEW3 520 aaPredicted RBP13.77□□□□□ -0.21
USB1-202ENST00000423271 BAIAP2L1Q9UHR4 511 aa13.77□□□□□ -0.21
USB1-202ENST00000423271 MPDZO75970 2070 aa13.76□□□□□ -0.21
USB1-202ENST00000423271 GXYLT2A0PJZ3 443 aa13.76□□□□□ -0.21
USB1-202ENST00000423271 CLCA1A8K7I4 914 aa13.76□□□□□ -0.21
USB1-202ENST00000423271 ZIC3O60481 467 aa13.76□□□□□ -0.21
USB1-202ENST00000423271 BCKDHAP12694 445 aa13.76□□□□□ -0.21
USB1-202ENST00000423271 EFNA1P20827 205 aaPredicted RBP13.76□□□□□ -0.21
USB1-202ENST00000423271 CTSSP25774 331 aa13.76□□□□□ -0.21
USB1-202ENST00000423271 DPP4P27487 766 aa13.76□□□□□ -0.21
USB1-202ENST00000423271 KIR2DL3P43628 341 aa13.76□□□□□ -0.21
USB1-202ENST00000423271 CLDN18P56856 261 aa13.76□□□□□ -0.21
USB1-202ENST00000423271 B3GALT5-AS1P59052 145 aa13.76□□□□□ -0.21
USB1-202ENST00000423271 MRPS22P82650 360 aaKnown RBP13.76□□□□□ -0.21
USB1-202ENST00000423271 FOXF2Q12947 444 aa13.76□□□□□ -0.21
USB1-202ENST00000423271 PDE7AQ13946 482 aa13.76□□□□□ -0.21
USB1-202ENST00000423271 TESK1Q15569 626 aa13.76□□□□□ -0.21
USB1-202ENST00000423271 DECR1Q16698 335 aa13.76□□□□□ -0.21
USB1-202ENST00000423271 FBXL19-AS1Q494R0 122 aa13.76□□□□□ -0.21
USB1-202ENST00000423271 CYP27C1Q4G0S4 372 aa13.76□□□□□ -0.21
USB1-202ENST00000423271 HSP90B2PQ58FF3 399 aa13.76□□□□□ -0.21
USB1-202ENST00000423271 ENPP6Q6UWR7 440 aa13.76□□□□□ -0.21
USB1-202ENST00000423271 ADGRE4PQ86SQ3 457 aa13.76□□□□□ -0.21
USB1-202ENST00000423271 FADS6Q8N9I5 356 aa13.76□□□□□ -0.21
USB1-202ENST00000423271 OR2M3Q8NG83 312 aa13.76□□□□□ -0.21
USB1-202ENST00000423271 OR4K17Q8NGC6 315 aa13.76□□□□□ -0.21
USB1-202ENST00000423271 FBXO30Q8TB52 745 aa13.76□□□□□ -0.21
USB1-202ENST00000423271 CKAP2Q8WWK9 683 aa13.76□□□□□ -0.21
USB1-202ENST00000423271 PPCDCQ96CD2 204 aa13.76□□□□□ -0.21
USB1-202ENST00000423271 ZNF764Q96H86 408 aaPredicted RBP13.76□□□□□ -0.21
USB1-202ENST00000423271 C1orf50Q9BV19 199 aa13.76□□□□□ -0.21
USB1-202ENST00000423271 DSN1Q9H410 356 aa13.76□□□□□ -0.21
USB1-202ENST00000423271 REEP4Q9H6H4 257 aa13.76□□□□□ -0.21
USB1-202ENST00000423271 SLC24A3Q9HC58 644 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms