RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 IGKV3D-11A0A0A0MRZ8 115 aa15.59■□□□□ 0.09
SSBP3-205ENST00000417664 ZNF701M0R085 212 aaPredicted RBP15.59■□□□□ 0.09
SSBP3-205ENST00000417664 ARHGAP33O14559 1287 aa15.59■□□□□ 0.09
SSBP3-205ENST00000417664 OR6B1O95007 311 aa15.59■□□□□ 0.09
SSBP3-205ENST00000417664 POU2F1P14859 743 aa15.59■□□□□ 0.09
SSBP3-205ENST00000417664 CHMP24386 653 aa15.59■□□□□ 0.09
SSBP3-205ENST00000417664 OR1D4P47884 311 aa15.59■□□□□ 0.09
SSBP3-205ENST00000417664 PSMD4P55036 377 aaKnown RBP15.59■□□□□ 0.09
SSBP3-205ENST00000417664 TARDBPQ13148 414 aaKnown RBP eCLIP15.59■□□□□ 0.091e-6■■■□□ 15.9
SSBP3-205ENST00000417664 PTGES3Q15185 160 aaKnown RBP15.59■□□□□ 0.09
SSBP3-205ENST00000417664 CNPY1Q3B7I2 92 aa15.59■□□□□ 0.09
SSBP3-205ENST00000417664 HMGN2P46Q86SG4 172 aa15.59■□□□□ 0.09
SSBP3-205ENST00000417664 TMEM105Q8N8V8 129 aa15.59■□□□□ 0.09
SSBP3-205ENST00000417664 MORN4Q8NDC4 146 aa15.59■□□□□ 0.09
SSBP3-205ENST00000417664 FAM81AQ8TBF8 368 aa15.59■□□□□ 0.09
SSBP3-205ENST00000417664 DOK4Q8TEW6 326 aa15.59■□□□□ 0.09
SSBP3-205ENST00000417664 NODALQ96S42 347 aa15.59■□□□□ 0.09
SSBP3-205ENST00000417664 MYCBPQ99417 103 aaPredicted RBP15.59■□□□□ 0.09
SSBP3-205ENST00000417664 MCHR1Q99705 422 aa15.59■□□□□ 0.09
SSBP3-205ENST00000417664 CNPPD1Q9BV87 410 aa15.59■□□□□ 0.09
SSBP3-205ENST00000417664 OR10A5Q9H207 317 aa15.59■□□□□ 0.09
SSBP3-205ENST00000417664 LRRN3Q9H3W5 708 aa15.59■□□□□ 0.09
SSBP3-205ENST00000417664 POLR1BQ9H9Y6 1135 aa15.59■□□□□ 0.09
SSBP3-205ENST00000417664 MKKSQ9NPJ1 570 aaPredicted RBP15.59■□□□□ 0.09
SSBP3-205ENST00000417664 PLCXD1Q9NUJ7 323 aa15.59■□□□□ 0.09
SSBP3-205ENST00000417664 IMPAD1Q9NX62 359 aa15.59■□□□□ 0.09
SSBP3-205ENST00000417664 DHCR7Q9UBM7 475 aaKnown RBP15.59■□□□□ 0.09
SSBP3-205ENST00000417664 FTSJ1Q9UET6 329 aa15.59■□□□□ 0.09
SSBP3-205ENST00000417664 GPR55Q9Y2T6 319 aaPredicted RBP15.59■□□□□ 0.09
SSBP3-205ENST00000417664 RP1P56715 2156 aa15.59■□□□□ 0.09
SSBP3-205ENST00000417664 GXYLT2A0PJZ3 443 aa15.58■□□□□ 0.08
SSBP3-205ENST00000417664 CDHR4A6H8M9 788 aa15.58■□□□□ 0.08
SSBP3-205ENST00000417664 TPST2O60704 377 aa15.58■□□□□ 0.08
SSBP3-205ENST00000417664 TNNI3P19429 210 aa15.58■□□□□ 0.08
SSBP3-205ENST00000417664 SSTR4P31391 388 aa15.58■□□□□ 0.08
SSBP3-205ENST00000417664 SLC35A2P78381 396 aa15.58■□□□□ 0.08
SSBP3-205ENST00000417664 TUBA3CQ13748 450 aa15.58■□□□□ 0.08
SSBP3-205ENST00000417664 FLYWCH1Q4VC44 716 aa15.58■□□□□ 0.08
SSBP3-205ENST00000417664 ENTPD8Q5MY95 495 aa15.58■□□□□ 0.08
SSBP3-205ENST00000417664 PERM1Q5SV97 790 aa15.58■□□□□ 0.08
SSBP3-205ENST00000417664 RHBDD2Q6NTF9 364 aa15.58■□□□□ 0.08
SSBP3-205ENST00000417664 FIGNL1Q6PIW4 674 aa15.58■□□□□ 0.08
SSBP3-205ENST00000417664 ZNF574Q6ZN55 896 aaPredicted RBP15.58■□□□□ 0.08
SSBP3-205ENST00000417664 PLEKHM3Q6ZWE6 761 aa15.58■□□□□ 0.08
SSBP3-205ENST00000417664 GRAMD2AQ8IUY3 354 aa15.58■□□□□ 0.08
SSBP3-205ENST00000417664 SPARTQ8N0X7 666 aa15.58■□□□□ 0.08
SSBP3-205ENST00000417664 ZNF615Q8N8J6 731 aa15.58■□□□□ 0.08
SSBP3-205ENST00000417664 YIPF2Q9BWQ6 316 aa15.58■□□□□ 0.08
SSBP3-205ENST00000417664 C14orf105Q9NVL8 296 aa15.58■□□□□ 0.08
SSBP3-205ENST00000417664 REV1Q9UBZ9 1251 aa15.58■□□□□ 0.08
SSBP3-205ENST00000417664 ERVK-19Q9WJR5 959 aa15.58■□□□□ 0.08
SSBP3-205ENST00000417664 RNF6Q9Y252 685 aa15.58■□□□□ 0.08
SSBP3-205ENST00000417664 PCDHGA10Q9Y5H3 936 aa15.58■□□□□ 0.08
SSBP3-205ENST00000417664 CEPT1Q9Y6K0 416 aa15.58■□□□□ 0.08
SSBP3-205ENST00000417664 COMMD3-BMI1R4GMX3 469 aa15.58■□□□□ 0.08
SSBP3-205ENST00000417664 A0A1W2PQM1 296 aa15.57■□□□□ 0.08
SSBP3-205ENST00000417664 C17orf105B2RV13 164 aa15.57■□□□□ 0.08
SSBP3-205ENST00000417664 WBP4O75554 376 aaKnown RBP15.57■□□□□ 0.08
SSBP3-205ENST00000417664 RPLP0P05388 317 aaKnown RBP15.57■□□□□ 0.08
SSBP3-205ENST00000417664 CKMT1AP12532 417 aa15.57■□□□□ 0.08
SSBP3-205ENST00000417664 CCL7P80098 99 aa15.57■□□□□ 0.08
SSBP3-205ENST00000417664 ELAVL1Q15717 326 aaKnown RBP15.57■□□□□ 0.08
SSBP3-205ENST00000417664 MAPK14Q16539 360 aa15.57■□□□□ 0.08
SSBP3-205ENST00000417664 DECR1Q16698 335 aa15.57■□□□□ 0.08
SSBP3-205ENST00000417664 TRIM61Q5EBN2 209 aa15.57■□□□□ 0.08
SSBP3-205ENST00000417664 MRPL2Q5T653 305 aaKnown RBP15.57■□□□□ 0.08
SSBP3-205ENST00000417664 RRM2BQ7LG56 351 aa15.57■□□□□ 0.08
SSBP3-205ENST00000417664 EID2Q8N6I1 236 aa15.57■□□□□ 0.08
SSBP3-205ENST00000417664 ZBTB44Q8NCP5 570 aa15.57■□□□□ 0.08
SSBP3-205ENST00000417664 C16orf52Q8NHV5 167 aa15.57■□□□□ 0.08
SSBP3-205ENST00000417664 TRUB1Q8WWH5 349 aaKnown RBP15.57■□□□□ 0.08
SSBP3-205ENST00000417664 ACOT11Q8WXI4 607 aaPredicted RBP15.57■□□□□ 0.08
SSBP3-205ENST00000417664 ART5Q96L15 291 aa15.57■□□□□ 0.08
SSBP3-205ENST00000417664 YIPF3Q9GZM5 350 aa15.57■□□□□ 0.08
SSBP3-205ENST00000417664 TESQ9UGI8 421 aaKnown RBP15.57■□□□□ 0.08
SSBP3-205ENST00000417664 A0A087WUU8 490 aa15.57■□□□□ 0.08
SSBP3-205ENST00000417664 CCDC160A6NGH7 325 aa15.57■□□□□ 0.08
SSBP3-205ENST00000417664 CPSF4LA6NMK7 179 aaKnown RBP15.57■□□□□ 0.08
SSBP3-205ENST00000417664 DRD5P21918 477 aa15.57■□□□□ 0.08
SSBP3-205ENST00000417664 FMO3P31513 532 aa15.57■□□□□ 0.08
SSBP3-205ENST00000417664 IDH2P48735 452 aaKnown RBP15.57■□□□□ 0.08
SSBP3-205ENST00000417664 PGDP52209 483 aa15.57■□□□□ 0.08
SSBP3-205ENST00000417664 ZNF136P52737 540 aa15.57■□□□□ 0.08
SSBP3-205ENST00000417664 ARHGAP40Q5TG30 622 aa15.57■□□□□ 0.08
SSBP3-205ENST00000417664 ZER1Q7Z7L7 766 aa15.57■□□□□ 0.08
SSBP3-205ENST00000417664 CMIPQ8IY22 773 aa15.57■□□□□ 0.08
SSBP3-205ENST00000417664 GNPDA2Q8TDQ7 276 aa15.57■□□□□ 0.08
SSBP3-205ENST00000417664 PTPMT1Q8WUK0 201 aaPredicted RBP15.57■□□□□ 0.08
SSBP3-205ENST00000417664 SLC41A3Q96GZ6 507 aa15.57■□□□□ 0.08
SSBP3-205ENST00000417664 SENP5Q96HI0 755 aaPredicted RBP15.57■□□□□ 0.08
SSBP3-205ENST00000417664 SLC46A1Q96NT5 459 aa15.57■□□□□ 0.08
SSBP3-205ENST00000417664 NECAB3Q96P71 396 aaPredicted RBP15.57■□□□□ 0.08
SSBP3-205ENST00000417664 TSC22D3Q99576 134 aa15.57■□□□□ 0.08
SSBP3-205ENST00000417664 TGIF2Q9GZN2 237 aa15.57■□□□□ 0.08
SSBP3-205ENST00000417664 KRCC1Q9NPI7 259 aaPredicted RBP15.57■□□□□ 0.08
SSBP3-205ENST00000417664 RASSF1Q9NS23 344 aa15.57■□□□□ 0.08
SSBP3-205ENST00000417664 SEMA4GQ9NTN9 838 aa15.57■□□□□ 0.08
SSBP3-205ENST00000417664 FBXO34Q9NWN3 711 aa15.57■□□□□ 0.08
SSBP3-205ENST00000417664 RSL24D1Q9UHA3 163 aaKnown RBP15.57■□□□□ 0.08
SSBP3-205ENST00000417664 IGHV5-10-1A0A0J9YXX1 117 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms