RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 PPP2R2BQ00005 443 aa16.38■□□□□ 0.21
VCP-202ENST00000417448 MAD2L1Q13257 205 aaPredicted RBP16.38■□□□□ 0.21
VCP-202ENST00000417448 HSPB2Q16082 182 aa16.38■□□□□ 0.21
VCP-202ENST00000417448 PIGGQ5H8A4 983 aa16.38■□□□□ 0.21
VCP-202ENST00000417448 CPTPQ5TA50 214 aa16.38■□□□□ 0.21
VCP-202ENST00000417448 HLA-DQA1Q5Y7H0 255 aa16.38■□□□□ 0.21
VCP-202ENST00000417448 DESI1Q6ICB0 168 aa16.38■□□□□ 0.21
VCP-202ENST00000417448 EPGNQ6UW88 154 aa16.38■□□□□ 0.21
VCP-202ENST00000417448 GK5Q6ZS86 529 aa16.38■□□□□ 0.21
VCP-202ENST00000417448 GPALPP1Q8IXQ4 340 aa16.38■□□□□ 0.21
VCP-202ENST00000417448 TNIP2Q8NFZ5 429 aa16.38■□□□□ 0.21
VCP-202ENST00000417448 OR8K3Q8NH51 312 aa16.38■□□□□ 0.21
VCP-202ENST00000417448 ZNF675Q8TD23 568 aa16.38■□□□□ 0.21
VCP-202ENST00000417448 ADIPOR1Q96A54 375 aa16.38■□□□□ 0.21
VCP-202ENST00000417448 NXF5Q9H1B4 397 aaKnown RBP16.38■□□□□ 0.21
VCP-202ENST00000417448 TRIM64A6NGJ6 449 aa16.37■□□□□ 0.21
VCP-202ENST00000417448 TRIM64BA6NI03 449 aa16.37■□□□□ 0.21
VCP-202ENST00000417448 SLCO1B7G3V0H7 640 aa16.37■□□□□ 0.21
VCP-202ENST00000417448 DVL2O14641 736 aa16.37■□□□□ 0.21
VCP-202ENST00000417448 ARHGEF9O43307 516 aa16.37■□□□□ 0.21
VCP-202ENST00000417448 ATP8B1O43520 1251 aa16.37■□□□□ 0.21
VCP-202ENST00000417448 TBX19O60806 448 aa16.37■□□□□ 0.21
VCP-202ENST00000417448 GABRA1P14867 456 aa16.37■□□□□ 0.21
VCP-202ENST00000417448 GPC1P35052 558 aa16.37■□□□□ 0.21
VCP-202ENST00000417448 IDH3AP50213 366 aa16.37■□□□□ 0.21
VCP-202ENST00000417448 AQP5P55064 265 aa16.37■□□□□ 0.21
VCP-202ENST00000417448 HYAL4Q2M3T9 481 aa16.37■□□□□ 0.21
VCP-202ENST00000417448 LSM12Q3MHD2 195 aaKnown RBP16.37■□□□□ 0.21
VCP-202ENST00000417448 OR4F3Q6IEY1 312 aa16.37■□□□□ 0.21
VCP-202ENST00000417448 LYPD8Q6UX82 237 aa16.37■□□□□ 0.21
VCP-202ENST00000417448 R3HCC1LQ7Z5L2 792 aaKnown RBP16.37■□□□□ 0.21
VCP-202ENST00000417448 PHC2Q8IXK0 858 aa16.37■□□□□ 0.21
VCP-202ENST00000417448 KIRREL3Q8IZU9 778 aa16.37■□□□□ 0.21
VCP-202ENST00000417448 ZNF441Q8N8Z8 693 aa16.37■□□□□ 0.21
VCP-202ENST00000417448 OR7G1Q8NGA0 311 aa16.37■□□□□ 0.21
VCP-202ENST00000417448 RFWD2Q8NHY2 731 aa16.37■□□□□ 0.21
VCP-202ENST00000417448 NUBPLQ8TB37 319 aa16.37■□□□□ 0.21
VCP-202ENST00000417448 ELP4Q96EB1 424 aa16.37■□□□□ 0.21
VCP-202ENST00000417448 FAM173AQ9BQD7 235 aa16.37■□□□□ 0.21
VCP-202ENST00000417448 DPY30Q9C005 99 aa16.37■□□□□ 0.21
VCP-202ENST00000417448 LDAHQ9H6V9 325 aa16.37■□□□□ 0.21
VCP-202ENST00000417448 MED4Q9NPJ6 270 aa16.37■□□□□ 0.21
VCP-202ENST00000417448 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.37■□□□□ 0.21
VCP-202ENST00000417448 ASIC5Q9NY37 505 aa16.37■□□□□ 0.21
VCP-202ENST00000417448 TUBA8Q9NY65 449 aaPredicted RBP16.37■□□□□ 0.21
VCP-202ENST00000417448 PCNX3Q9H6A9 2034 aa16.36■□□□□ 0.21
VCP-202ENST00000417448 TRGV5A0A0B4J1U4 118 aa16.36■□□□□ 0.21
VCP-202ENST00000417448 OR6C76A6NM76 312 aa16.36■□□□□ 0.21
VCP-202ENST00000417448 UPK1AO00322 258 aa16.36■□□□□ 0.21
VCP-202ENST00000417448 ANKRD28O15084 1053 aa16.36■□□□□ 0.21
VCP-202ENST00000417448 C6orf47O95873 294 aa16.36■□□□□ 0.21
VCP-202ENST00000417448 ABCB1P08183 1280 aaPredicted RBP16.36■□□□□ 0.21
VCP-202ENST00000417448 CNR1P21554 472 aa16.36■□□□□ 0.21
VCP-202ENST00000417448 IL12AP29459 219 aa16.36■□□□□ 0.21
VCP-202ENST00000417448 PRKAG1P54619 331 aa16.36■□□□□ 0.21
VCP-202ENST00000417448 CORO7P57737 925 aa16.36■□□□□ 0.21
VCP-202ENST00000417448 PHC1P78364 1004 aa16.36■□□□□ 0.21
VCP-202ENST00000417448 SLC10A1Q14973 349 aa16.36■□□□□ 0.21
VCP-202ENST00000417448 SMU1Q2TAY7 513 aa16.36■□□□□ 0.21
VCP-202ENST00000417448 SPATA19Q7Z5L4 167 aa16.36■□□□□ 0.21
VCP-202ENST00000417448 P3H2Q8IVL5 708 aa16.36■□□□□ 0.21
VCP-202ENST00000417448 ULK2Q8IYT8 1036 aa16.36■□□□□ 0.21
VCP-202ENST00000417448 SAMD14Q8IZD0 417 aaPredicted RBP16.36■□□□□ 0.21
VCP-202ENST00000417448 CLECL1Q8IZS7 167 aa16.36■□□□□ 0.21
VCP-202ENST00000417448 CLEC4FQ8N1N0 589 aa16.36■□□□□ 0.21
VCP-202ENST00000417448 COQ8BQ96D53 544 aa16.36■□□□□ 0.21
VCP-202ENST00000417448 MTERF3Q96E29 417 aa16.36■□□□□ 0.21
VCP-202ENST00000417448 MAELQ96JY0 434 aaKnown RBP16.36■□□□□ 0.21
VCP-202ENST00000417448 FOLH1BQ9HBA9 442 aa16.36■□□□□ 0.21
VCP-202ENST00000417448 EQTNQ9NQ60 294 aa16.36■□□□□ 0.21
VCP-202ENST00000417448 AIG1Q9NVV5 245 aa16.36■□□□□ 0.21
VCP-202ENST00000417448 FOXD3Q9UJU5 478 aaPredicted RBP16.36■□□□□ 0.21
VCP-202ENST00000417448 DCTN4Q9UJW0 460 aa16.36■□□□□ 0.21
VCP-202ENST00000417448 GPR45Q9Y5Y3 372 aa16.36■□□□□ 0.21
VCP-202ENST00000417448 DOCK7Q96N67 2140 aa16.36■□□□□ 0.21
VCP-202ENST00000417448 A0A1W2PRB8 838 aa16.35■□□□□ 0.21
VCP-202ENST00000417448 E9PBE3 544 aa16.35■□□□□ 0.21
VCP-202ENST00000417448 EDF1O60869 148 aaKnown RBP16.35■□□□□ 0.21
VCP-202ENST00000417448 PRPS1L1P21108 318 aa16.35■□□□□ 0.21
VCP-202ENST00000417448 CEACAM8P31997 349 aaPredicted RBP16.35■□□□□ 0.21
VCP-202ENST00000417448 ZNF136P52737 540 aa16.35■□□□□ 0.21
VCP-202ENST00000417448 OGFOD2Q6N063 350 aa16.35■□□□□ 0.21
VCP-202ENST00000417448 SZRD1Q7Z422 152 aa16.35■□□□□ 0.21
VCP-202ENST00000417448 ANKRD46Q86W74 232 aa16.35■□□□□ 0.21
VCP-202ENST00000417448 OR4N2Q8NGD1 307 aa16.35■□□□□ 0.21
VCP-202ENST00000417448 FBXO30Q8TB52 745 aa16.35■□□□□ 0.21
VCP-202ENST00000417448 ACTRT2Q8TDY3 377 aa16.35■□□□□ 0.21
VCP-202ENST00000417448 LRRC46Q96FV0 321 aa16.35■□□□□ 0.21
VCP-202ENST00000417448 OTUB1Q96FW1 271 aaPredicted RBP16.35■□□□□ 0.21
VCP-202ENST00000417448 DUSP26Q9BV47 211 aa16.35■□□□□ 0.21
VCP-202ENST00000417448 NPHS2Q9NP85 383 aa16.35■□□□□ 0.21
VCP-202ENST00000417448 PLOD3O60568 738 aa16.34■□□□□ 0.21
VCP-202ENST00000417448 HCN1O60741 890 aa16.34■□□□□ 0.21
VCP-202ENST00000417448 CCL3P10147 92 aa16.34■□□□□ 0.21
VCP-202ENST00000417448 FRKP42685 505 aaPredicted RBP16.34■□□□□ 0.21
VCP-202ENST00000417448 GYS2P54840 703 aa16.34■□□□□ 0.21
VCP-202ENST00000417448 FBXW4P57775 412 aa16.34■□□□□ 0.21
VCP-202ENST00000417448 ZNF155Q12901 538 aaPredicted RBP16.34■□□□□ 0.21
VCP-202ENST00000417448 SPANXN4Q5MJ08 99 aa16.34■□□□□ 0.21
VCP-202ENST00000417448 NPSR1Q6W5P4 371 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms