RNA–Protein interactions for RNA: ENST00000415891.5

CLIP4-205, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5

Gene CLIP4, Length 2,269 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-205ENST00000415891 IFNGR2P38484 337 aa6.29□□□□□ -1.4
CLIP4-205ENST00000415891 GRIA3P42263 894 aa6.29□□□□□ -1.4
CLIP4-205ENST00000415891 AKR1C3P42330 323 aa6.29□□□□□ -1.4
CLIP4-205ENST00000415891 IDH2P48735 452 aaKnown RBP6.29□□□□□ -1.4
CLIP4-205ENST00000415891 EVX1P49640 407 aa6.29□□□□□ -1.4
CLIP4-205ENST00000415891 SLC37A1P57057 533 aa6.29□□□□□ -1.4
CLIP4-205ENST00000415891 INSM1Q01101 510 aaPredicted RBP6.29□□□□□ -1.4
CLIP4-205ENST00000415891 ELAVL2Q12926 359 aaKnown RBP6.29□□□□□ -1.4
CLIP4-205ENST00000415891 AIMP2Q13155 320 aaKnown RBP6.29□□□□□ -1.4
CLIP4-205ENST00000415891 RPE65Q16518 533 aa6.29□□□□□ -1.4
CLIP4-205ENST00000415891 PRAMEF18Q5VWM3 479 aa6.29□□□□□ -1.4
CLIP4-205ENST00000415891 RNF165Q6ZSG1 346 aa6.29□□□□□ -1.4
CLIP4-205ENST00000415891 PAQR7Q86WK9 346 aa6.29□□□□□ -1.4
CLIP4-205ENST00000415891 GPC2Q8N158 579 aa6.29□□□□□ -1.4
CLIP4-205ENST00000415891 MMGT1Q8N4V1 131 aa6.29□□□□□ -1.4
CLIP4-205ENST00000415891 NLGN4YQ8NFZ3 816 aaPredicted RBP6.29□□□□□ -1.4
CLIP4-205ENST00000415891 C11orf40Q8WZ69 217 aa6.29□□□□□ -1.4
CLIP4-205ENST00000415891 LENG9Q96B70 501 aa6.29□□□□□ -1.4
CLIP4-205ENST00000415891 DCLRE1CQ96SD1 692 aaKnown RBP6.29□□□□□ -1.4
CLIP4-205ENST00000415891 PAFAH2Q99487 392 aa6.29□□□□□ -1.4
CLIP4-205ENST00000415891 TSNAXQ99598 290 aaKnown RBP6.29□□□□□ -1.4
CLIP4-205ENST00000415891 PHB2Q99623 299 aa6.29□□□□□ -1.4
CLIP4-205ENST00000415891 ATG101Q9BSB4 218 aa6.29□□□□□ -1.4
CLIP4-205ENST00000415891 NDUFAF3Q9BU61 184 aa6.29□□□□□ -1.4
CLIP4-205ENST00000415891 ZNF426Q9BUY5 554 aa6.29□□□□□ -1.4
CLIP4-205ENST00000415891 ALG12Q9BV10 488 aa6.29□□□□□ -1.4
CLIP4-205ENST00000415891 C1QTNF2Q9BXJ5 285 aa6.29□□□□□ -1.4
CLIP4-205ENST00000415891 RPF2Q9H7B2 306 aaKnown RBP6.29□□□□□ -1.4
CLIP4-205ENST00000415891 NIPAL2Q9H841 368 aa6.29□□□□□ -1.4
CLIP4-205ENST00000415891 NECTIN3Q9NQS3 549 aa6.29□□□□□ -1.4
CLIP4-205ENST00000415891 PDGFCQ9NRA1 345 aa6.29□□□□□ -1.4
CLIP4-205ENST00000415891 LRP2BPQ9P2M1 347 aa6.29□□□□□ -1.4
CLIP4-205ENST00000415891 SEC14L3Q9UDX4 400 aa6.29□□□□□ -1.4
CLIP4-205ENST00000415891 SCP2D1Q9UJQ7 156 aa6.29□□□□□ -1.4
CLIP4-205ENST00000415891 ZNF337Q9Y3M9 751 aa6.29□□□□□ -1.4
CLIP4-205ENST00000415891 ARHGEF40Q8TER5 1519 aa6.29□□□□□ -1.4
CLIP4-205ENST00000415891 SAGE2PA6NJ88 616 aa6.29□□□□□ -1.4
CLIP4-205ENST00000415891 DFFAO00273 331 aa6.29□□□□□ -1.4
CLIP4-205ENST00000415891 GOSR2O14653 212 aa6.29□□□□□ -1.4
CLIP4-205ENST00000415891 CDIPTO14735 213 aa6.29□□□□□ -1.4
CLIP4-205ENST00000415891 TCF21O43680 179 aa6.29□□□□□ -1.4
CLIP4-205ENST00000415891 RAD1O60671 282 aa6.29□□□□□ -1.4
CLIP4-205ENST00000415891 CILPO75339 1184 aa6.29□□□□□ -1.4
CLIP4-205ENST00000415891 CA11O75493 328 aa6.29□□□□□ -1.4
CLIP4-205ENST00000415891 UGT2B17O75795 530 aa6.29□□□□□ -1.4
CLIP4-205ENST00000415891 CLDN9O95484 217 aa6.29□□□□□ -1.4
CLIP4-205ENST00000415891 NR3C1P04150 777 aa6.29□□□□□ -1.4
CLIP4-205ENST00000415891 RPLP0P05388 317 aaKnown RBP6.29□□□□□ -1.4
CLIP4-205ENST00000415891 G6PDP11413 515 aa6.29□□□□□ -1.4
CLIP4-205ENST00000415891 GTF2F2P13984 249 aa6.29□□□□□ -1.4
CLIP4-205ENST00000415891 MATN1P21941 496 aa6.29□□□□□ -1.4
CLIP4-205ENST00000415891 SLC6A6P31641 620 aa6.29□□□□□ -1.4
CLIP4-205ENST00000415891 MTHFSP49914 203 aa6.29□□□□□ -1.4
CLIP4-205ENST00000415891 PTTG1IPP53801 180 aa6.29□□□□□ -1.4
CLIP4-205ENST00000415891 CDH11P55287 796 aa6.29□□□□□ -1.4
CLIP4-205ENST00000415891 KLF3P57682 345 aaPredicted RBP6.29□□□□□ -1.4
CLIP4-205ENST00000415891 MYL5Q02045 173 aa6.29□□□□□ -1.4
CLIP4-205ENST00000415891 TNK2Q07912 1038 aa6.29□□□□□ -1.4
CLIP4-205ENST00000415891 SLC10A7Q0GE19 358 aa6.29□□□□□ -1.4
CLIP4-205ENST00000415891 TMEM115Q12893 351 aaPredicted RBP6.29□□□□□ -1.4
CLIP4-205ENST00000415891 BNIP3Q12983 259 aa6.29□□□□□ -1.4
CLIP4-205ENST00000415891 GRAPQ13588 217 aa6.29□□□□□ -1.4
CLIP4-205ENST00000415891 GRB14Q14449 540 aa6.29□□□□□ -1.4
CLIP4-205ENST00000415891 RBMS2Q15434 407 aaKnown RBP6.29□□□□□ -1.4
CLIP4-205ENST00000415891 CATSPEREQ5SY80 951 aa6.29□□□□□ -1.4
CLIP4-205ENST00000415891 ZC3H13Q5T200 1668 aaKnown RBP6.29□□□□□ -1.4
CLIP4-205ENST00000415891 ADGRA3Q8IWK6 1321 aa6.29□□□□□ -1.4
CLIP4-205ENST00000415891 CPXM2Q8N436 756 aa6.29□□□□□ -1.4
CLIP4-205ENST00000415891 AQP11Q8NBQ7 271 aa6.29□□□□□ -1.4
CLIP4-205ENST00000415891 OR52N4Q8NGI2 321 aa6.29□□□□□ -1.4
CLIP4-205ENST00000415891 OR9Q1Q8NGQ5 310 aa6.29□□□□□ -1.4
CLIP4-205ENST00000415891 LNX1Q8TBB1 728 aaPredicted RBP6.29□□□□□ -1.4
CLIP4-205ENST00000415891 ZFP90Q8TF47 636 aa6.29□□□□□ -1.4
CLIP4-205ENST00000415891 PPP1R13LQ8WUF5 828 aa6.29□□□□□ -1.4
CLIP4-205ENST00000415891 NRGNQ92686 78 aa6.29□□□□□ -1.4
CLIP4-205ENST00000415891 CMTM7Q96FZ5 175 aa6.29□□□□□ -1.4
CLIP4-205ENST00000415891 PRR11Q96HE9 360 aaPredicted RBP6.29□□□□□ -1.4
CLIP4-205ENST00000415891 INSM2Q96T92 566 aaPredicted RBP6.29□□□□□ -1.4
CLIP4-205ENST00000415891 TTYH2Q9BSA4 534 aa6.29□□□□□ -1.4
CLIP4-205ENST00000415891 INPP5KQ9BT40 448 aa6.29□□□□□ -1.4
CLIP4-205ENST00000415891 ELOVL6Q9H5J4 265 aa6.29□□□□□ -1.4
CLIP4-205ENST00000415891 GBA2Q9HCG7 927 aaPredicted RBP6.29□□□□□ -1.4
CLIP4-205ENST00000415891 AKIP1Q9NQ31 210 aa6.29□□□□□ -1.4
CLIP4-205ENST00000415891 OXSMQ9NWU1 459 aa6.29□□□□□ -1.4
CLIP4-205ENST00000415891 GNG8Q9UK08 70 aa6.29□□□□□ -1.4
CLIP4-205ENST00000415891 ZNF490Q9ULM2 529 aaPredicted RBP6.29□□□□□ -1.4
CLIP4-205ENST00000415891 POLR3KQ9Y2Y1 108 aaPredicted RBP6.29□□□□□ -1.4
CLIP4-205ENST00000415891 UGGT1Q9NYU2 1555 aa6.28□□□□□ -1.4
CLIP4-205ENST00000415891 ABCC6O95255 1503 aa6.28□□□□□ -1.4
CLIP4-205ENST00000415891 ATP10DQ9P241 1426 aa6.28□□□□□ -1.4
CLIP4-205ENST00000415891 WIPF3A6NGB9 483 aa6.28□□□□□ -1.4
CLIP4-205ENST00000415891 PPP6CO00743 305 aa6.28□□□□□ -1.4
CLIP4-205ENST00000415891 DLX3O60479 287 aa6.28□□□□□ -1.4
CLIP4-205ENST00000415891 CDC14BO60729 498 aa6.28□□□□□ -1.4
CLIP4-205ENST00000415891 MMP20O60882 483 aa6.28□□□□□ -1.4
CLIP4-205ENST00000415891 ATG12O94817 140 aa6.28□□□□□ -1.4
CLIP4-205ENST00000415891 KCNK2O95069 426 aa6.28□□□□□ -1.4
CLIP4-205ENST00000415891 TSPAN12O95859 305 aa6.28□□□□□ -1.4
CLIP4-205ENST00000415891 RPN2P04844 631 aa6.28□□□□□ -1.4
CLIP4-205ENST00000415891 F13BP05160 661 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms