RNA–Protein interactions for RNA: ENST00000415541.5

SIK3-203, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 3,816 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-203ENST00000415541 CD96P40200 585 aa7.38□□□□□ -1.23
SIK3-203ENST00000415541 BDKRB1P46663 353 aa7.38□□□□□ -1.23
SIK3-203ENST00000415541 SNRPEP62304 92 aaKnown RBP7.38□□□□□ -1.23
SIK3-203ENST00000415541 SHHQ15465 462 aa7.38□□□□□ -1.23
SIK3-203ENST00000415541 UQCC3Q6UW78 93 aa7.38□□□□□ -1.23
SIK3-203ENST00000415541 GSG1LQ6UXU4 331 aa7.38□□□□□ -1.23
SIK3-203ENST00000415541 FAM122BQ7Z309 247 aa7.38□□□□□ -1.23
SIK3-203ENST00000415541 MEIOBQ8N635 442 aa7.38□□□□□ -1.23
SIK3-203ENST00000415541 FIBINQ8TAL6 211 aa7.38□□□□□ -1.23
SIK3-203ENST00000415541 SPPL2AQ8TCT8 520 aa7.38□□□□□ -1.23
SIK3-203ENST00000415541 DDOQ99489 341 aa7.38□□□□□ -1.23
SIK3-203ENST00000415541 SOSTQ9BQB4 213 aa7.38□□□□□ -1.23
SIK3-203ENST00000415541 KATNB1Q9BVA0 655 aa7.38□□□□□ -1.23
SIK3-203ENST00000415541 ZCCHC2Q9C0B9 1178 aaKnown RBP7.38□□□□□ -1.23
SIK3-203ENST00000415541 ELOVL2Q9NXB9 296 aa7.38□□□□□ -1.23
SIK3-203ENST00000415541 GALPQ9UBC7 116 aa7.38□□□□□ -1.23
SIK3-203ENST00000415541 TRPS1Q9UHF7 1281 aa7.38□□□□□ -1.23
SIK3-203ENST00000415541 ING1Q9UK53 422 aaPredicted RBP7.38□□□□□ -1.23
SIK3-203ENST00000415541 MRTO4Q9UKD2 239 aaKnown RBP7.38□□□□□ -1.23
SIK3-203ENST00000415541 SLC31A1O15431 190 aa7.38□□□□□ -1.23
SIK3-203ENST00000415541 TXNL1O43396 289 aa7.38□□□□□ -1.23
SIK3-203ENST00000415541 LDB2O43679 373 aa7.38□□□□□ -1.23
SIK3-203ENST00000415541 FPR3P25089 353 aa7.38□□□□□ -1.23
SIK3-203ENST00000415541 GDF5P43026 501 aa7.38□□□□□ -1.23
SIK3-203ENST00000415541 ARFIP1P53367 373 aa7.38□□□□□ -1.23
SIK3-203ENST00000415541 SPCS3P61009 180 aa7.38□□□□□ -1.23
SIK3-203ENST00000415541 RPL38P63173 70 aaKnown RBP7.38□□□□□ -1.23
SIK3-203ENST00000415541 VLDLRP98155 873 aa7.38□□□□□ -1.23
SIK3-203ENST00000415541 PLK5Q496M5 336 aa7.38□□□□□ -1.23
SIK3-203ENST00000415541 FAM109BQ6ICB4 259 aaPredicted RBP7.38□□□□□ -1.23
SIK3-203ENST00000415541 CASP12Q6UXS9 341 aa7.38□□□□□ -1.23
SIK3-203ENST00000415541 TPRG1Q6ZUI0 275 aa7.38□□□□□ -1.23
SIK3-203ENST00000415541 CALHM3Q86XJ0 350 aa7.38□□□□□ -1.23
SIK3-203ENST00000415541 SYNPOQ8N3V7 929 aa7.38□□□□□ -1.23
SIK3-203ENST00000415541 ZBTB2Q8N680 514 aa7.38□□□□□ -1.23
SIK3-203ENST00000415541 OR52P1PQ8NH57 321 aa7.38□□□□□ -1.23
SIK3-203ENST00000415541 OR14C36Q8NHC7 312 aa7.38□□□□□ -1.23
SIK3-203ENST00000415541 SELENOMQ8WWX9 145 aa7.38□□□□□ -1.23
SIK3-203ENST00000415541 CPNE4Q96A23 557 aaPredicted RBP7.38□□□□□ -1.23
SIK3-203ENST00000415541 FUBP1Q96AE4 644 aaKnown RBP7.38□□□□□ -1.23
SIK3-203ENST00000415541 RNFT2Q96EX2 444 aa7.38□□□□□ -1.23
SIK3-203ENST00000415541 WDR77Q9BQA1 342 aaPredicted RBP7.38□□□□□ -1.23
SIK3-203ENST00000415541 GPN1Q9HCN4 374 aaPredicted RBP7.38□□□□□ -1.23
SIK3-203ENST00000415541 PCDHB1Q9Y5F3 818 aa7.38□□□□□ -1.23
SIK3-203ENST00000415541 CFAP20Q9Y6A4 193 aaKnown RBP7.38□□□□□ -1.23
SIK3-203ENST00000415541 IRGMA1A4Y4 181 aa7.38□□□□□ -1.23
SIK3-203ENST00000415541 WASH3PC4AMC7 463 aa7.38□□□□□ -1.23
SIK3-203ENST00000415541 GTPBP1O00178 669 aaKnown RBP7.38□□□□□ -1.23
SIK3-203ENST00000415541 LILRB5O75023 590 aa7.38□□□□□ -1.23
SIK3-203ENST00000415541 SIX6O95475 246 aa7.38□□□□□ -1.23
SIK3-203ENST00000415541 AHCYP23526 432 aa7.38□□□□□ -1.23
SIK3-203ENST00000415541 DDX6P26196 483 aaKnown RBP eCLIP7.38□□□□□ -1.23
SIK3-203ENST00000415541 RPIAP49247 311 aa7.38□□□□□ -1.23
SIK3-203ENST00000415541 AGFG1P52594 562 aaKnown RBP7.38□□□□□ -1.23
SIK3-203ENST00000415541 RIDAP52758 137 aaKnown RBP7.38□□□□□ -1.23
SIK3-203ENST00000415541 CTBP2P56545 445 aa7.38□□□□□ -1.23
SIK3-203ENST00000415541 OR2B11Q5JQS5 317 aa7.38□□□□□ -1.23
SIK3-203ENST00000415541 SPANXN4Q5MJ08 99 aa7.38□□□□□ -1.23
SIK3-203ENST00000415541 TMEM88Q6PEY1 159 aa7.38□□□□□ -1.23
SIK3-203ENST00000415541 NCEH1Q6PIU2 408 aa7.38□□□□□ -1.23
SIK3-203ENST00000415541 CFAP206Q8IYR0 622 aa7.38□□□□□ -1.23
SIK3-203ENST00000415541 LGI4Q8N135 537 aa7.38□□□□□ -1.23
SIK3-203ENST00000415541 SLC5A8Q8N695 610 aa7.38□□□□□ -1.23
SIK3-203ENST00000415541 MDGA1Q8NFP4 955 aa7.38□□□□□ -1.23
SIK3-203ENST00000415541 AKR7LQ8NHP1 331 aa7.38□□□□□ -1.23
SIK3-203ENST00000415541 ARMC5Q96C12 935 aa7.38□□□□□ -1.23
SIK3-203ENST00000415541 CPPED1Q9BRF8 314 aaPredicted RBP7.38□□□□□ -1.23
SIK3-203ENST00000415541 ALX4Q9H161 411 aaPredicted RBP7.38□□□□□ -1.23
SIK3-203ENST00000415541 TREX1Q9NSU2 369 aa7.38□□□□□ -1.23
SIK3-203ENST00000415541 NLE1Q9NVX2 485 aaPredicted RBP7.38□□□□□ -1.23
SIK3-203ENST00000415541 OR6C2Q9NZP2 312 aa7.38□□□□□ -1.23
SIK3-203ENST00000415541 PCDHGA2Q9Y5H1 932 aa7.38□□□□□ -1.23
SIK3-203ENST00000415541 NUMA1Q14980 2115 aa7.38□□□□□ -1.23
SIK3-203ENST00000415541 IGLV3-10A0A075B6K4 115 aa7.37□□□□□ -1.23
SIK3-203ENST00000415541 TRBV23OR9-2A0A075B6M9 112 aa7.37□□□□□ -1.23
SIK3-203ENST00000415541 GNG14A0A1W2PPG7 69 aa7.37□□□□□ -1.23
SIK3-203ENST00000415541 SMIM30A4D0T7 59 aa7.37□□□□□ -1.23
SIK3-203ENST00000415541 SCN2BO60939 215 aa7.37□□□□□ -1.23
SIK3-203ENST00000415541 ULK1O75385 1050 aa7.37□□□□□ -1.23
SIK3-203ENST00000415541 HNRNPA1P09651 372 aaKnown RBP eCLIP7.37□□□□□ -1.23
SIK3-203ENST00000415541 PSMA3P25788 255 aa7.37□□□□□ -1.23
SIK3-203ENST00000415541 HOXC13P31276 330 aa7.37□□□□□ -1.23
SIK3-203ENST00000415541 PTGFRP43088 359 aa7.37□□□□□ -1.23
SIK3-203ENST00000415541 XKP51811 444 aa7.37□□□□□ -1.23
SIK3-203ENST00000415541 SPIBQ01892 262 aa7.37□□□□□ -1.23
SIK3-203ENST00000415541 HLXQ14774 488 aaPredicted RBP7.37□□□□□ -1.23
SIK3-203ENST00000415541 PDGFRLQ15198 375 aa7.37□□□□□ -1.23
SIK3-203ENST00000415541 C21orf62-AS1Q17RA5 79 aa7.37□□□□□ -1.23
SIK3-203ENST00000415541 SLC22A10Q63ZE4 541 aa7.37□□□□□ -1.23
SIK3-203ENST00000415541 PDE12Q6L8Q7 609 aaKnown RBP7.37□□□□□ -1.23
SIK3-203ENST00000415541 CXorf57Q6NSI4 855 aaKnown RBP7.37□□□□□ -1.23
SIK3-203ENST00000415541 TMEM220Q6QAJ8 160 aa7.37□□□□□ -1.23
SIK3-203ENST00000415541 CBLL1Q75N03 491 aa7.37□□□□□ -1.23
SIK3-203ENST00000415541 ABI3BPQ7Z7G0 1075 aa7.37□□□□□ -1.23
SIK3-203ENST00000415541 ZFP82Q8N141 532 aa7.37□□□□□ -1.23
SIK3-203ENST00000415541 NANOGP1Q8N7R0 232 aa7.37□□□□□ -1.23
SIK3-203ENST00000415541 GPR26Q8NDV2 337 aa7.37□□□□□ -1.23
SIK3-203ENST00000415541 OR5M9Q8NGP3 310 aa7.37□□□□□ -1.23
SIK3-203ENST00000415541 FGF13Q92913 245 aa7.37□□□□□ -1.23
SIK3-203ENST00000415541 CHFRQ96EP1 664 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms