RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 ADAM5Q6NVV9 412 aa3.86□□□□□ -1.79
HMGB3P31-201ENST00000413333 HSD11B1LQ7Z5J1 315 aa3.86□□□□□ -1.79
HMGB3P31-201ENST00000413333 PARGQ86W56 976 aa3.86□□□□□ -1.79
HMGB3P31-201ENST00000413333 TMEM17Q86X19 198 aa3.86□□□□□ -1.79
HMGB3P31-201ENST00000413333 ABHD12Q8N2K0 398 aa3.86□□□□□ -1.79
HMGB3P31-201ENST00000413333 ARL14Q8N4G2 192 aa3.86□□□□□ -1.79
HMGB3P31-201ENST00000413333 FAM133AQ8N9E0 248 aa3.86□□□□□ -1.79
HMGB3P31-201ENST00000413333 NANPQ8TBE9 248 aa3.86□□□□□ -1.79
HMGB3P31-201ENST00000413333 RLN3Q8WXF3 142 aa3.86□□□□□ -1.79
HMGB3P31-201ENST00000413333 SHC3Q92529 594 aa3.86□□□□□ -1.79
HMGB3P31-201ENST00000413333 MYLPFQ96A32 169 aa3.86□□□□□ -1.79
HMGB3P31-201ENST00000413333 TMEM121Q9BTD3 319 aa3.86□□□□□ -1.79
HMGB3P31-201ENST00000413333 TRIM6Q9C030 488 aaPredicted RBP3.86□□□□□ -1.79
HMGB3P31-201ENST00000413333 PNNQ9H307 717 aaKnown RBP3.86□□□□□ -1.79
HMGB3P31-201ENST00000413333 VCX2Q9H322 139 aa3.86□□□□□ -1.79
HMGB3P31-201ENST00000413333 HPCAL4Q9UM19 191 aa3.86□□□□□ -1.79
HMGB3P31-201ENST00000413333 BARX2Q9UMQ3 279 aaPredicted RBP3.86□□□□□ -1.79
HMGB3P31-201ENST00000413333 RNF24Q9Y225 148 aa3.86□□□□□ -1.79
HMGB3P31-201ENST00000413333 RRP15Q9Y3B9 282 aaKnown RBP3.86□□□□□ -1.79
HMGB3P31-201ENST00000413333 CNTNAP2Q9UHC6 1331 aa3.86□□□□□ -1.79
HMGB3P31-201ENST00000413333 KIF26BQ2KJY2 2108 aa3.86□□□□□ -1.79
HMGB3P31-201ENST00000413333 ATP10DQ9P241 1426 aa3.86□□□□□ -1.79
HMGB3P31-201ENST00000413333 IGHV3-16A0A0C4DH30 117 aa3.85□□□□□ -1.79
HMGB3P31-201ENST00000413333 ZSCAN5BA6NJL1 495 aa3.85□□□□□ -1.79
HMGB3P31-201ENST00000413333 TM9SF1O15321 606 aa3.85□□□□□ -1.79
HMGB3P31-201ENST00000413333 CPN1P15169 458 aa3.85□□□□□ -1.79
HMGB3P31-201ENST00000413333 SDC1P18827 310 aa3.85□□□□□ -1.79
HMGB3P31-201ENST00000413333 HNF1AP20823 631 aa3.85□□□□□ -1.79
HMGB3P31-201ENST00000413333 PLA2G16P53816 162 aa3.85□□□□□ -1.79
HMGB3P31-201ENST00000413333 MS4A2Q01362 244 aa3.85□□□□□ -1.79
HMGB3P31-201ENST00000413333 EWSR1Q01844 656 aaKnown RBP eCLIP3.85□□□□□ -1.79
HMGB3P31-201ENST00000413333 PAX8Q06710 450 aa3.85□□□□□ -1.79
HMGB3P31-201ENST00000413333 RGS1Q08116 209 aa3.85□□□□□ -1.79
HMGB3P31-201ENST00000413333 CYLC2Q14093 348 aaPredicted RBP3.85□□□□□ -1.79
HMGB3P31-201ENST00000413333 TTC23Q5W5X9 447 aa3.85□□□□□ -1.79
HMGB3P31-201ENST00000413333 PYHIN1Q6K0P9 492 aa3.85□□□□□ -1.79
HMGB3P31-201ENST00000413333 KCNIP4Q6PIL6 250 aa3.85□□□□□ -1.79
HMGB3P31-201ENST00000413333 TIPARPQ7Z3E1 657 aaKnown RBP3.85□□□□□ -1.79
HMGB3P31-201ENST00000413333 ANKRD37Q7Z713 158 aa3.85□□□□□ -1.79
HMGB3P31-201ENST00000413333 ACOT1Q86TX2 421 aa3.85□□□□□ -1.79
HMGB3P31-201ENST00000413333 LRRC49Q8IUZ0 686 aa3.85□□□□□ -1.79
HMGB3P31-201ENST00000413333 ZCCHC7Q8N3Z6 543 aaKnown RBP3.85□□□□□ -1.79
HMGB3P31-201ENST00000413333 ZSCAN4Q8NAM6 433 aaPredicted RBP3.85□□□□□ -1.79
HMGB3P31-201ENST00000413333 STEAP2Q8NFT2 490 aa3.85□□□□□ -1.79
HMGB3P31-201ENST00000413333 TRMT10AQ8TBZ6 339 aaKnown RBP3.85□□□□□ -1.79
HMGB3P31-201ENST00000413333 M1APQ8TC57 530 aa3.85□□□□□ -1.79
HMGB3P31-201ENST00000413333 SDSLQ96GA7 329 aa3.85□□□□□ -1.79
HMGB3P31-201ENST00000413333 CCT7Q99832 543 aa3.85□□□□□ -1.79
HMGB3P31-201ENST00000413333 ADNPQ9H2P0 1102 aa3.85□□□□□ -1.79
HMGB3P31-201ENST00000413333 RAI14Q9P0K7 980 aa3.85□□□□□ -1.79
HMGB3P31-201ENST00000413333 ANAPC7Q9UJX3 599 aa3.85□□□□□ -1.79
HMGB3P31-201ENST00000413333 GSTK1Q9Y2Q3 226 aa3.85□□□□□ -1.79
HMGB3P31-201ENST00000413333 MOB4Q9Y3A3 225 aa3.85□□□□□ -1.79
HMGB3P31-201ENST00000413333 MRPL11Q9Y3B7 192 aaKnown RBP3.85□□□□□ -1.79
HMGB3P31-201ENST00000413333 IGHV3OR16-10A0A075B7F0 116 aa3.84□□□□□ -1.79
HMGB3P31-201ENST00000413333 ESYT2A0FGR8 921 aa3.84□□□□□ -1.79
HMGB3P31-201ENST00000413333 MBLAC1A4D2B0 266 aaPredicted RBP3.84□□□□□ -1.79
HMGB3P31-201ENST00000413333 EPM2AB3EWF7 344 aa3.84□□□□□ -1.79
HMGB3P31-201ENST00000413333 EFNA2O43921 213 aa3.84□□□□□ -1.79
HMGB3P31-201ENST00000413333 B3GAT3O94766 335 aa3.84□□□□□ -1.79
HMGB3P31-201ENST00000413333 IGHV3-9P01782 118 aa3.84□□□□□ -1.79
HMGB3P31-201ENST00000413333 IGF1P05019 195 aa3.84□□□□□ -1.79
HMGB3P31-201ENST00000413333 SNRPCP09234 159 aaKnown RBP3.84□□□□□ -1.79
HMGB3P31-201ENST00000413333 PVRP15151 417 aa3.84□□□□□ -1.79
HMGB3P31-201ENST00000413333 NT5EP21589 574 aa3.84□□□□□ -1.79
HMGB3P31-201ENST00000413333 IDSP22304 550 aa3.84□□□□□ -1.79
HMGB3P31-201ENST00000413333 BDKRB1P46663 353 aa3.84□□□□□ -1.79
HMGB3P31-201ENST00000413333 ERVK11-1P61568 191 aa3.84□□□□□ -1.79
HMGB3P31-201ENST00000413333 HYAL1Q12794 435 aa3.84□□□□□ -1.79
HMGB3P31-201ENST00000413333 ATXN7L3Q14CW9 347 aaPredicted RBP3.84□□□□□ -1.79
HMGB3P31-201ENST00000413333 TMEM52BQ4KMG9 183 aa3.84□□□□□ -1.79
HMGB3P31-201ENST00000413333 C14orf177Q52M58 125 aa3.84□□□□□ -1.79
HMGB3P31-201ENST00000413333 ZNF506Q5JVG8 444 aa3.84□□□□□ -1.79
HMGB3P31-201ENST00000413333 C10orf120Q5SQS8 335 aa3.84□□□□□ -1.79
HMGB3P31-201ENST00000413333 SPATA46Q5T0L3 261 aa3.84□□□□□ -1.79
HMGB3P31-201ENST00000413333 Q6ZTC4 211 aa3.84□□□□□ -1.79
HMGB3P31-201ENST00000413333 TMUB2Q71RG4 321 aa3.84□□□□□ -1.79
HMGB3P31-201ENST00000413333 CEACAM19Q7Z692 300 aa3.84□□□□□ -1.79
HMGB3P31-201ENST00000413333 ERICH1Q86X53 443 aa3.84□□□□□ -1.79
HMGB3P31-201ENST00000413333 SLC38A6Q8IZM9 456 aa3.84□□□□□ -1.79
HMGB3P31-201ENST00000413333 LRRC43Q8N309 656 aa3.84□□□□□ -1.79
HMGB3P31-201ENST00000413333 EIF1ADQ8N9N8 165 aaKnown RBP3.84□□□□□ -1.79
HMGB3P31-201ENST00000413333 FLVCR1-AS1Q8TAF5 88 aa3.84□□□□□ -1.79
HMGB3P31-201ENST00000413333 FNDC8Q8TC99 324 aa3.84□□□□□ -1.79
HMGB3P31-201ENST00000413333 WBP1Q96G27 269 aa3.84□□□□□ -1.79
HMGB3P31-201ENST00000413333 EDEM2Q9BV94 578 aa3.84□□□□□ -1.79
HMGB3P31-201ENST00000413333 LRRC40Q9H9A6 602 aa3.84□□□□□ -1.79
HMGB3P31-201ENST00000413333 MEPEQ9NQ76 525 aaPredicted RBP3.84□□□□□ -1.79
HMGB3P31-201ENST00000413333 MRPL39Q9NYK5 338 aaKnown RBP3.84□□□□□ -1.79
HMGB3P31-201ENST00000413333 COX16Q9P0S2 106 aa3.84□□□□□ -1.79
HMGB3P31-201ENST00000413333 GNG12Q9UBI6 72 aa3.84□□□□□ -1.79
HMGB3P31-201ENST00000413333 PRODH2Q9UF12 536 aa3.84□□□□□ -1.79
HMGB3P31-201ENST00000413333 LCMT1Q9UIC8 334 aa3.84□□□□□ -1.79
HMGB3P31-201ENST00000413333 CRLS1Q9UJA2 301 aa3.84□□□□□ -1.79
HMGB3P31-201ENST00000413333 PTBP2Q9UKA9 531 aaKnown RBP3.84□□□□□ -1.79
HMGB3P31-201ENST00000413333 CLEC4AQ9UMR7 237 aa3.84□□□□□ -1.79
HMGB3P31-201ENST00000413333 WDR45Q9Y484 360 aa3.84□□□□□ -1.79
HMGB3P31-201ENST00000413333 GMPPBQ9Y5P6 360 aa3.84□□□□□ -1.79
HMGB3P31-201ENST00000413333 STYXL1Q9Y6J8 313 aa3.84□□□□□ -1.79
HMGB3P31-201ENST00000413333 SPACA6W5XKT8 324 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms