RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 ARF5P84085 180 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 ZNF543Q08ER8 600 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 B3GNTL1Q67FW5 361 aaPredicted RBP4.92□□□□□ -1.62
HERC4-205ENST00000412272 LEMD1Q68G75 181 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 UNQ9370/PRO34162Q6UXP9 181 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 MOB2Q70IA6 237 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 SPPL2CQ8IUH8 684 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 STXBP6Q8NFX7 210 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 TMEM125Q96AQ2 219 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 LENG9Q96B70 501 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 ECHDC3Q96DC8 303 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 MVB12AQ96EY5 273 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 TCTN2Q96GX1 697 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 TMEM56Q96MV1 263 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 PITX2Q99697 317 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 PCGF1Q9BSM1 259 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 MSTO1Q9BUK6 570 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 ZDHHC5Q9C0B5 715 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 OR10A5Q9H207 317 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 SIX4Q9UIU6 781 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 UTS2RQ9UKP6 389 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 WIF1Q9Y5W5 379 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 TMEM56-RWDD3S4R434 201 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 M0R082 166 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 ACOT7O00154 380 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 SIAH2O43255 324 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 ORC5O43913 435 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 NTSR2O95665 410 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 RHOP08100 348 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 PEPDP12955 493 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 ZNF7P17097 686 aaPredicted RBP4.92□□□□□ -1.62
HERC4-205ENST00000412272 PGAM1P18669 254 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 SLC6A2P23975 617 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 CSF2RBP32927 897 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 CTSOP43234 321 aaPredicted RBP4.92□□□□□ -1.62
HERC4-205ENST00000412272 NPBWR1P48145 328 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 SPDYE7PQ495Y7 208 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 PKDCCQ504Y2 493 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 KLHL22Q53GT1 634 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 OR52W1Q6IF63 320 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 DNAJC24Q6P3W2 148 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 METAP1DQ6UB28 335 aaPredicted RBP4.92□□□□□ -1.62
HERC4-205ENST00000412272 ANKRD33Q7Z3H0 272 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 PDZD9Q8IXQ8 264 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 DNERQ8NFT8 737 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 BEST4Q8NFU0 473 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 CNOT9Q92600 299 aaKnown RBP4.92□□□□□ -1.62
HERC4-205ENST00000412272 KAT2AQ92830 837 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 ZBED6CLQ96FA7 236 aaPredicted RBP4.92□□□□□ -1.62
HERC4-205ENST00000412272 OSMRQ99650 979 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 NAA11Q9BSU3 229 aaPredicted RBP4.92□□□□□ -1.62
HERC4-205ENST00000412272 WDR11Q9BZH6 1224 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 BHLHE41Q9C0J9 482 aaPredicted RBP4.92□□□□□ -1.62
HERC4-205ENST00000412272 OR10A4Q9H209 315 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 MAGIXQ9H6Y5 334 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 LATS2Q9NRM7 1088 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 RNF6Q9Y252 685 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 CARHSP1Q9Y2V2 147 aaKnown RBP4.92□□□□□ -1.62
HERC4-205ENST00000412272 COL1A2P08123 1366 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 LY75O60449 1722 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 A0A1W2PPH5 198 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 TRDCB7Z8K6 153 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 SRPX2O60687 465 aaPredicted RBP4.92□□□□□ -1.62
HERC4-205ENST00000412272 STBD1O95210 358 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 IL18BPO95998 194 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 IFNA17P01571 189 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 F11P03951 625 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 GABRA1P14867 456 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 PTPN3P26045 913 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 PIGAP37287 484 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 MMP12P39900 470 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 SLC1A2P43004 574 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 CDX1P47902 265 aaPredicted RBP4.92□□□□□ -1.62
HERC4-205ENST00000412272 DLX5P56178 289 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 OGDHQ02218 1023 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 TMEM255AQ5JRV8 349 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 PCID2Q5JVF3 399 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 PRSS36Q5K4E3 855 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 TRMT10BQ6PF06 316 aaKnown RBP4.92□□□□□ -1.62
HERC4-205ENST00000412272 FAM198BQ6UWH4 519 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 LCLAT1Q6UWP7 414 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 ALKAL2Q6UX46 152 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 COLCA1Q6ZS62 124 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 UBE2R2Q712K3 238 aaPredicted RBP4.92□□□□□ -1.62
HERC4-205ENST00000412272 EIF3MQ7L2H7 374 aaKnown RBP4.92□□□□□ -1.62
HERC4-205ENST00000412272 MYPOPQ86VE0 399 aaPredicted RBP4.92□□□□□ -1.62
HERC4-205ENST00000412272 CNTN4Q8IWV2 1026 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 PQLC3Q8N755 202 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 FBXL13Q8NEE6 735 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 SEMA6DQ8NFY4 1073 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 SELENOMQ8WWX9 145 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 HIST1H2BAQ96A08 127 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 C3orf49Q96BT1 292 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 PTCHD1Q96NR3 888 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 ERMAPQ96PL5 475 aaPredicted RBP4.92□□□□□ -1.62
HERC4-205ENST00000412272 P2RX7Q99572 595 aaKnown RBP4.92□□□□□ -1.62
HERC4-205ENST00000412272 SOSTQ9BQB4 213 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 RNF208Q9H0X6 261 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 TMEM38AQ9H6F2 299 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 DLL4Q9NR61 685 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms