RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-206ENST00000409987 GSTT2P0CG29 244 aa4.37□□□□□ -1.71
LSM5-206ENST00000409987 GSTT2BP0CG30 244 aa4.37□□□□□ -1.71
LSM5-206ENST00000409987 HOXB6P17509 224 aaKnown RBP4.37□□□□□ -1.71
LSM5-206ENST00000409987 OPRL1P41146 370 aa4.37□□□□□ -1.71
LSM5-206ENST00000409987 HTR5AP47898 357 aa4.37□□□□□ -1.71
LSM5-206ENST00000409987 AP3M2P53677 418 aa4.37□□□□□ -1.71
LSM5-206ENST00000409987 KLF5Q13887 457 aaPredicted RBP4.37□□□□□ -1.71
LSM5-206ENST00000409987 MESDQ14696 234 aa4.37□□□□□ -1.71
LSM5-206ENST00000409987 MAPK6Q16659 721 aa4.37□□□□□ -1.71
LSM5-206ENST00000409987 TMEM44Q2T9K0 475 aa4.37□□□□□ -1.71
LSM5-206ENST00000409987 ZNF699Q32M78 642 aa4.37□□□□□ -1.71
LSM5-206ENST00000409987 C1orf189Q5VU69 101 aa4.37□□□□□ -1.71
LSM5-206ENST00000409987 NLRP9Q7RTR0 991 aa4.37□□□□□ -1.71
LSM5-206ENST00000409987 CATSPERDQ86XM0 798 aa4.37□□□□□ -1.71
LSM5-206ENST00000409987 CACUL1Q86Y37 369 aa4.37□□□□□ -1.71
LSM5-206ENST00000409987 TMEM123Q8N131 208 aa4.37□□□□□ -1.71
LSM5-206ENST00000409987 MNS1Q8NEH6 495 aa4.37□□□□□ -1.71
LSM5-206ENST00000409987 KCNG3Q8TAE7 436 aa4.37□□□□□ -1.71
LSM5-206ENST00000409987 C19orf60Q96EN9 201 aa4.37□□□□□ -1.71
LSM5-206ENST00000409987 PCED1BQ96HM7 432 aa4.37□□□□□ -1.71
LSM5-206ENST00000409987 ANKRD27Q96NW4 1050 aa4.37□□□□□ -1.71
LSM5-206ENST00000409987 RPRD1AQ96P16 312 aaPredicted RBP4.37□□□□□ -1.71
LSM5-206ENST00000409987 TGM7Q96PF1 710 aa4.37□□□□□ -1.71
LSM5-206ENST00000409987 IL12RB2Q99665 862 aa4.37□□□□□ -1.71
LSM5-206ENST00000409987 SIKE1Q9BRV8 207 aa4.37□□□□□ -1.71
LSM5-206ENST00000409987 CLEC7AQ9BXN2 247 aa4.37□□□□□ -1.71
LSM5-206ENST00000409987 HAUS4Q9H6D7 363 aa4.37□□□□□ -1.71
LSM5-206ENST00000409987 STARD5Q9NSY2 213 aa4.37□□□□□ -1.71
LSM5-206ENST00000409987 C1orf123Q9NWV4 160 aa4.37□□□□□ -1.71
LSM5-206ENST00000409987 FZR1Q9UM11 496 aa4.37□□□□□ -1.71
LSM5-206ENST00000409987 CA5BQ9Y2D0 317 aa4.37□□□□□ -1.71
LSM5-206ENST00000409987 GSTK1Q9Y2Q3 226 aa4.37□□□□□ -1.71
LSM5-206ENST00000409987 ATP10DQ9P241 1426 aa4.37□□□□□ -1.71
LSM5-206ENST00000409987 CUX1P39880 1505 aa4.36□□□□□ -1.71
LSM5-206ENST00000409987 MAGI3Q5TCQ9 1506 aa4.36□□□□□ -1.71
LSM5-206ENST00000409987 ADAMTS12P58397 1594 aa4.36□□□□□ -1.71
LSM5-206ENST00000409987 MED1Q15648 1581 aaPredicted RBP4.36□□□□□ -1.71
LSM5-206ENST00000409987 NKX6-3A6NJ46 265 aa4.36□□□□□ -1.71
LSM5-206ENST00000409987 WASHC1A8K0Z3 465 aa4.36□□□□□ -1.71
LSM5-206ENST00000409987 H0YL77 283 aa4.36□□□□□ -1.71
LSM5-206ENST00000409987 NDUFS8O00217 210 aa4.36□□□□□ -1.71
LSM5-206ENST00000409987 STX7O15400 261 aaKnown RBP4.36□□□□□ -1.71
LSM5-206ENST00000409987 TIMM8AO60220 97 aaPredicted RBP4.36□□□□□ -1.71
LSM5-206ENST00000409987 TSPAN2O60636 221 aa4.36□□□□□ -1.71
LSM5-206ENST00000409987 MAGEC1O60732 1142 aa4.36□□□□□ -1.71
LSM5-206ENST00000409987 ZFAND5O76080 213 aa4.36□□□□□ -1.71
LSM5-206ENST00000409987 SLC35G4P0C7Q5 338 aa4.36□□□□□ -1.71
LSM5-206ENST00000409987 UBTFL6P0CB48 400 aaPredicted RBP4.36□□□□□ -1.71
LSM5-206ENST00000409987 MBL2P11226 248 aaPredicted RBP4.36□□□□□ -1.71
LSM5-206ENST00000409987 ZNF26P17031 533 aaPredicted RBP4.36□□□□□ -1.71
LSM5-206ENST00000409987 LAP3P28838 519 aa4.36□□□□□ -1.71
LSM5-206ENST00000409987 BMI1P35226 326 aa4.36□□□□□ -1.71
LSM5-206ENST00000409987 MAGEA8P43361 318 aa4.36□□□□□ -1.71
LSM5-206ENST00000409987 CDKN1BP46527 198 aa4.36□□□□□ -1.71
LSM5-206ENST00000409987 CCT3P49368 545 aaKnown RBP4.36□□□□□ -1.71
LSM5-206ENST00000409987 SGSHP51688 502 aa4.36□□□□□ -1.71
LSM5-206ENST00000409987 NDST1P52848 882 aa4.36□□□□□ -1.71
LSM5-206ENST00000409987 PLA2G16P53816 162 aa4.36□□□□□ -1.71
LSM5-206ENST00000409987 HADHBP55084 474 aaKnown RBP4.36□□□□□ -1.71
LSM5-206ENST00000409987 DNAJC3Q13217 504 aa4.36□□□□□ -1.71
LSM5-206ENST00000409987 MAB21L1Q13394 359 aa4.36□□□□□ -1.71
LSM5-206ENST00000409987 GANABQ14697 944 aaKnown RBP4.36□□□□□ -1.71
LSM5-206ENST00000409987 SGSM1Q2NKQ1 1148 aa4.36□□□□□ -1.71
LSM5-206ENST00000409987 TMEM30BQ3MIR4 351 aa4.36□□□□□ -1.71
LSM5-206ENST00000409987 SPANXN4Q5MJ08 99 aa4.36□□□□□ -1.71
LSM5-206ENST00000409987 DDI2Q5TDH0 399 aa4.36□□□□□ -1.71
LSM5-206ENST00000409987 ATL3Q6DD88 541 aa4.36□□□□□ -1.71
LSM5-206ENST00000409987 TTC19Q6DKK2 380 aaPredicted RBP4.36□□□□□ -1.71
LSM5-206ENST00000409987 DMKNQ6E0U4 476 aaPredicted RBP4.36□□□□□ -1.71
LSM5-206ENST00000409987 KIF6Q6ZMV9 814 aa4.36□□□□□ -1.71
LSM5-206ENST00000409987 Q6ZRG5 221 aa4.36□□□□□ -1.71
LSM5-206ENST00000409987 ITIH5Q86UX2 942 aa4.36□□□□□ -1.71
LSM5-206ENST00000409987 RANBP3LQ86VV4 465 aaPredicted RBP4.36□□□□□ -1.71
LSM5-206ENST00000409987 SPEM1Q8N4L4 309 aa4.36□□□□□ -1.71
LSM5-206ENST00000409987 SPERTQ8NA61 448 aa4.36□□□□□ -1.71
LSM5-206ENST00000409987 TSEN15Q8WW01 171 aaKnown RBP4.36□□□□□ -1.71
LSM5-206ENST00000409987 FAM3CQ92520 227 aa4.36□□□□□ -1.71
LSM5-206ENST00000409987 SH3YL1Q96HL8 342 aaPredicted RBP4.36□□□□□ -1.71
LSM5-206ENST00000409987 IFT74Q96LB3 600 aa4.36□□□□□ -1.71
LSM5-206ENST00000409987 RIT2Q99578 217 aa4.36□□□□□ -1.71
LSM5-206ENST00000409987 POLR3FQ9H1D9 316 aaPredicted RBP4.36□□□□□ -1.71
LSM5-206ENST00000409987 FNDC4Q9H6D8 234 aaPredicted RBP4.36□□□□□ -1.71
LSM5-206ENST00000409987 AUNIPQ9H7T9 357 aa4.36□□□□□ -1.71
LSM5-206ENST00000409987 FGF22Q9HCT0 170 aa4.36□□□□□ -1.71
LSM5-206ENST00000409987 SLC2A8Q9NY64 477 aa4.36□□□□□ -1.71
LSM5-206ENST00000409987 NLGN3Q9NZ94 848 aa4.36□□□□□ -1.71
LSM5-206ENST00000409987 CACNG5Q9UF02 275 aa4.36□□□□□ -1.71
LSM5-206ENST00000409987 LCMT1Q9UIC8 334 aa4.36□□□□□ -1.71
LSM5-206ENST00000409987 EMCNQ9ULC0 261 aa4.36□□□□□ -1.71
LSM5-206ENST00000409987 SLC6A5Q9Y345 797 aa4.36□□□□□ -1.71
LSM5-206ENST00000409987 FKBP7Q9Y680 259 aa4.36□□□□□ -1.71
LSM5-206ENST00000409987 COMMD3-BMI1R4GMX3 469 aa4.36□□□□□ -1.71
LSM5-206ENST00000409987 CD109Q6YHK3 1445 aa4.36□□□□□ -1.71
LSM5-206ENST00000409987 UHRF1BP1LA0JNW5 1464 aa4.36□□□□□ -1.71
LSM5-206ENST00000409987 ARAP3Q8WWN8 1544 aa4.36□□□□□ -1.71
LSM5-206ENST00000409987 KIF21BO75037 1637 aa4.35□□□□□ -1.71
LSM5-206ENST00000409987 TTC26A0AVF1 554 aa4.35□□□□□ -1.71
LSM5-206ENST00000409987 OR2AG2A6NM03 316 aa4.35□□□□□ -1.71
LSM5-206ENST00000409987 PRR23D1E9PI22 279 aaPredicted RBP4.35□□□□□ -1.71
LSM5-206ENST00000409987 LMO7DNF2Z398 122 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms