RNA–Protein interactions for RNA: ENST00000409809.5

COL6A3-206, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 5 BASIC

Gene COL6A3, Length 8,916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-206ENST00000409809 ASB17Q8WXJ9 295 aa12.25□□□□□ -0.45
COL6A3-206ENST00000409809 HMCESQ96FZ2 354 aa12.25□□□□□ -0.45
COL6A3-206ENST00000409809 MCHR1Q99705 422 aa12.25□□□□□ -0.45
COL6A3-206ENST00000409809 GBA2Q9HCG7 927 aaPredicted RBP12.25□□□□□ -0.45
COL6A3-206ENST00000409809 MAN2C1Q9NTJ4 1040 aa12.25□□□□□ -0.45
COL6A3-206ENST00000409809 PCDHGA7Q9Y5G6 932 aa12.25□□□□□ -0.45
COL6A3-206ENST00000409809 PLIN4Q96Q06 1357 aa12.25□□□□□ -0.45
COL6A3-206ENST00000409809 MT-CYBP00156 380 aaPredicted RBP12.25□□□□□ -0.45
COL6A3-206ENST00000409809 FGF4P08620 206 aa12.25□□□□□ -0.45
COL6A3-206ENST00000409809 DPEP1P16444 411 aa12.25□□□□□ -0.45
COL6A3-206ENST00000409809 TLE1Q04724 770 aa12.25□□□□□ -0.45
COL6A3-206ENST00000409809 SSBP1Q04837 148 aaKnown RBP12.25□□□□□ -0.45
COL6A3-206ENST00000409809 STEAP3Q658P3 488 aa12.25□□□□□ -0.45
COL6A3-206ENST00000409809 NRARPQ7Z6K4 114 aa12.25□□□□□ -0.45
COL6A3-206ENST00000409809 SLC7A6Q92536 515 aa12.25□□□□□ -0.45
COL6A3-206ENST00000409809 FTCDNL1E5RQL4 147 aa12.25□□□□□ -0.45
COL6A3-206ENST00000409809 APOA2P02652 100 aa12.25□□□□□ -0.45
COL6A3-206ENST00000409809 SERPINE2P07093 398 aa12.25□□□□□ -0.45
COL6A3-206ENST00000409809 GNB3P16520 340 aa12.25□□□□□ -0.45
COL6A3-206ENST00000409809 NDUFV1P49821 464 aa12.25□□□□□ -0.45
COL6A3-206ENST00000409809 EMX1Q04741 257 aaPredicted RBP12.25□□□□□ -0.45
COL6A3-206ENST00000409809 CEACAM7Q14002 265 aa12.25□□□□□ -0.45
COL6A3-206ENST00000409809 HBEGFQ99075 208 aa12.25□□□□□ -0.45
COL6A3-206ENST00000409809 XRN1Q8IZH2 1706 aaKnown RBP12.25□□□□□ -0.45
COL6A3-206ENST00000409809 SELENOVP59797 346 aa12.25□□□□□ -0.45
COL6A3-206ENST00000409809 MZT1Q08AG7 82 aa12.25□□□□□ -0.45
COL6A3-206ENST00000409809 CDKN2AIPNLQ96HQ2 116 aa12.25□□□□□ -0.45
COL6A3-206ENST00000409809 ZNF251Q9BRH9 671 aa12.25□□□□□ -0.45
COL6A3-206ENST00000409809 STRA6Q9BX79 667 aa12.25□□□□□ -0.45
COL6A3-206ENST00000409809 NMNAT2Q9BZQ4 307 aa12.25□□□□□ -0.45
COL6A3-206ENST00000409809 MIR1-1HGQ9H1L0 117 aa12.25□□□□□ -0.45
COL6A3-206ENST00000409809 MROH6A6NGR9 719 aa12.25□□□□□ -0.45
COL6A3-206ENST00000409809 SLC7A9P82251 487 aa12.25□□□□□ -0.45
COL6A3-206ENST00000409809 MALLQ13021 153 aa12.25□□□□□ -0.45
COL6A3-206ENST00000409809 TXLNGYQ9BZA5 131 aa12.25□□□□□ -0.45
COL6A3-206ENST00000409809 IL37Q9NZH6 218 aa12.25□□□□□ -0.45
COL6A3-206ENST00000409809 TMEM233B4DJY2 109 aa12.25□□□□□ -0.45
COL6A3-206ENST00000409809 GCAP28676 217 aa12.25□□□□□ -0.45
COL6A3-206ENST00000409809 GTDC1Q4AE62 458 aa12.25□□□□□ -0.45
COL6A3-206ENST00000409809 SIGIRRQ6IA17 410 aa12.25□□□□□ -0.45
COL6A3-206ENST00000409809 DBX2Q6ZNG2 339 aa12.25□□□□□ -0.45
COL6A3-206ENST00000409809 PARGQ86W56 976 aa12.25□□□□□ -0.45
COL6A3-206ENST00000409809 OR1S1Q8NH92 325 aa12.25□□□□□ -0.45
COL6A3-206ENST00000409809 SORCS2Q96PQ0 1159 aa12.25□□□□□ -0.45
COL6A3-206ENST00000409809 CACFD1Q9UGQ2 172 aa12.25□□□□□ -0.45
COL6A3-206ENST00000409809 EVLQ9UI08 416 aaPredicted RBP12.25□□□□□ -0.45
COL6A3-206ENST00000409809 ATRNL1Q5VV63 1379 aa12.25□□□□□ -0.45
COL6A3-206ENST00000409809 TMEM221A6NGB7 291 aa12.24□□□□□ -0.45
COL6A3-206ENST00000409809 CXorf49A8MYA2 514 aaPredicted RBP12.24□□□□□ -0.45
COL6A3-206ENST00000409809 AK4P27144 223 aaPredicted RBP12.24□□□□□ -0.45
COL6A3-206ENST00000409809 RBM39Q14498 530 aaKnown RBP12.24□□□□□ -0.45
COL6A3-206ENST00000409809 OR10G6Q8NH81 332 aa12.24□□□□□ -0.45
COL6A3-206ENST00000409809 APH1BQ8WW43 257 aa12.24□□□□□ -0.45
COL6A3-206ENST00000409809 YIPF5Q969M3 257 aa12.24□□□□□ -0.45
COL6A3-206ENST00000409809 ANKRD31Q8N7Z5 1873 aa12.24□□□□□ -0.45
COL6A3-206ENST00000409809 CH25HO95992 272 aa12.24□□□□□ -0.45
COL6A3-206ENST00000409809 CSNK2A1P68400 391 aaPredicted RBP12.24□□□□□ -0.45
COL6A3-206ENST00000409809 KIAA0141Q14154 515 aaPredicted RBP12.24□□□□□ -0.45
COL6A3-206ENST00000409809 C3orf38Q5JPI3 329 aa12.24□□□□□ -0.45
COL6A3-206ENST00000409809 NHLRC2Q8NBF2 726 aa12.24□□□□□ -0.45
COL6A3-206ENST00000409809 CSNK2A3Q8NEV1 391 aa12.24□□□□□ -0.45
COL6A3-206ENST00000409809 TBC1D20Q96BZ9 403 aa12.24□□□□□ -0.45
COL6A3-206ENST00000409809 KATNB1Q9BVA0 655 aa12.24□□□□□ -0.45
COL6A3-206ENST00000409809 TOLLIPQ9H0E2 274 aa12.24□□□□□ -0.45
COL6A3-206ENST00000409809 PTAFRP25105 342 aa12.24□□□□□ -0.45
COL6A3-206ENST00000409809 MAT2AP31153 395 aaKnown RBP12.24□□□□□ -0.45
COL6A3-206ENST00000409809 SOX10P56693 466 aa12.24□□□□□ -0.45
COL6A3-206ENST00000409809 HMGCS1Q01581 520 aa12.24□□□□□ -0.45
COL6A3-206ENST00000409809 MLC1Q15049 377 aa12.24□□□□□ -0.45
COL6A3-206ENST00000409809 PPP1R3BQ86XI6 285 aa12.24□□□□□ -0.45
COL6A3-206ENST00000409809 TTC24A2A3L6 582 aaPredicted RBP12.24□□□□□ -0.45
COL6A3-206ENST00000409809 DHRS4L1P0CG22 281 aa12.24□□□□□ -0.45
COL6A3-206ENST00000409809 CNKSR3Q6P9H4 555 aa12.24□□□□□ -0.45
COL6A3-206ENST00000409809 PKMYT1Q99640 499 aa12.24□□□□□ -0.45
COL6A3-206ENST00000409809 STRAPQ9Y3F4 350 aaKnown RBP12.24□□□□□ -0.45
COL6A3-206ENST00000409809 TIMM13Q9Y5L4 95 aaPredicted RBP12.24□□□□□ -0.45
COL6A3-206ENST00000409809 ESPL1Q14674 2120 aa12.24□□□□□ -0.45
COL6A3-206ENST00000409809 NDUFS4O43181 175 aa12.24□□□□□ -0.45
COL6A3-206ENST00000409809 AHSGP02765 367 aa12.24□□□□□ -0.45
COL6A3-206ENST00000409809 OPN1SWP03999 348 aa12.24□□□□□ -0.45
COL6A3-206ENST00000409809 PRKACGP22612 351 aa12.24□□□□□ -0.45
COL6A3-206ENST00000409809 HOXA10P31260 410 aaPredicted RBP12.24□□□□□ -0.45
COL6A3-206ENST00000409809 TNFSF8P32971 234 aa12.24□□□□□ -0.45
COL6A3-206ENST00000409809 MPEG1Q2M385 716 aa12.24□□□□□ -0.45
COL6A3-206ENST00000409809 PHYHD1Q5SRE7 291 aa12.24□□□□□ -0.45
COL6A3-206ENST00000409809 MANEALQ5VSG8 457 aa12.24□□□□□ -0.45
COL6A3-206ENST00000409809 PARPBPQ9NWS1 579 aa12.24□□□□□ -0.45
COL6A3-206ENST00000409809 HLA-DOBP13765 273 aa12.24□□□□□ -0.45
COL6A3-206ENST00000409809 BCL7AQ4VC05 210 aa12.24□□□□□ -0.45
COL6A3-206ENST00000409809 TCTE3Q8IZS6 198 aa12.24□□□□□ -0.45
COL6A3-206ENST00000409809 LRRN4Q8WUT4 740 aa12.24□□□□□ -0.45
COL6A3-206ENST00000409809 BLOC1S5-TXNDC5H3BN57 136 aa12.24□□□□□ -0.45
COL6A3-206ENST00000409809 GPR39O43194 453 aa12.24□□□□□ -0.45
COL6A3-206ENST00000409809 GABARAPO95166 117 aa12.24□□□□□ -0.45
COL6A3-206ENST00000409809 KLK1P06870 262 aa12.24□□□□□ -0.45
COL6A3-206ENST00000409809 GPR50Q13585 617 aa12.24□□□□□ -0.45
COL6A3-206ENST00000409809 ANKK1Q8NFD2 765 aa12.24□□□□□ -0.45
COL6A3-206ENST00000409809 CMSS1Q9BQ75 279 aaKnown RBP12.24□□□□□ -0.45
COL6A3-206ENST00000409809 TTPALQ9BTX7 342 aa12.24□□□□□ -0.45
COL6A3-206ENST00000409809 SCPEP1Q9HB40 452 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms