RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 PAPD4Q6PIY7 484 aaKnown RBP11.53□□□□□ -0.56
CHMP3-204ENST00000409727 SVOPLQ8N434 492 aa11.53□□□□□ -0.56
CHMP3-204ENST00000409727 BCORP1Q8N888 145 aa11.53□□□□□ -0.56
CHMP3-204ENST00000409727 OR6T1Q8NGN1 323 aa11.53□□□□□ -0.56
CHMP3-204ENST00000409727 ART5Q96L15 291 aa11.53□□□□□ -0.56
CHMP3-204ENST00000409727 ZNF597Q96LX8 424 aa11.53□□□□□ -0.56
CHMP3-204ENST00000409727 LRFN5Q96NI6 719 aa11.53□□□□□ -0.56
CHMP3-204ENST00000409727 ZNF347Q96SE7 839 aa11.53□□□□□ -0.56
CHMP3-204ENST00000409727 FOXJ2Q9P0K8 574 aa11.53□□□□□ -0.56
CHMP3-204ENST00000409727 MUC6Q6W4X9 2439 aa11.52□□□□□ -0.56
CHMP3-204ENST00000409727 C9orf172C9J069 976 aa11.52□□□□□ -0.57
CHMP3-204ENST00000409727 FFAR1O14842 300 aa11.52□□□□□ -0.57
CHMP3-204ENST00000409727 ADAMDEC1O15204 470 aa11.52□□□□□ -0.57
CHMP3-204ENST00000409727 HS6ST1O60243 411 aa11.52□□□□□ -0.57
CHMP3-204ENST00000409727 SEMA7AO75326 666 aa11.52□□□□□ -0.57
CHMP3-204ENST00000409727 DNAJB5O75953 348 aa11.52□□□□□ -0.57
CHMP3-204ENST00000409727 UQCRBP14927 111 aa11.52□□□□□ -0.57
CHMP3-204ENST00000409727 RHCEP18577 417 aa11.52□□□□□ -0.57
CHMP3-204ENST00000409727 PRKAR1BP31321 381 aa11.52□□□□□ -0.57
CHMP3-204ENST00000409727 PIGAP37287 484 aa11.52□□□□□ -0.57
CHMP3-204ENST00000409727 IL1RL1Q01638 556 aa11.52□□□□□ -0.57
CHMP3-204ENST00000409727 PIN1Q13526 163 aaPredicted RBP11.52□□□□□ -0.57
CHMP3-204ENST00000409727 ZIK1Q3SY52 487 aaPredicted RBP11.52□□□□□ -0.57
CHMP3-204ENST00000409727 PDZK1Q5T2W1 519 aa11.52□□□□□ -0.57
CHMP3-204ENST00000409727 WLSQ5T9L3 541 aa11.52□□□□□ -0.57
CHMP3-204ENST00000409727 TCTN3Q6NUS6 607 aa11.52□□□□□ -0.57
CHMP3-204ENST00000409727 SLC29A4Q7RTT9 530 aa11.52□□□□□ -0.57
CHMP3-204ENST00000409727 CPEB2Q7Z5Q1 589 aaKnown RBP11.52□□□□□ -0.57
CHMP3-204ENST00000409727 GLRX5Q86SX6 157 aa11.52□□□□□ -0.57
CHMP3-204ENST00000409727 PACRGLQ8N7B6 248 aa11.52□□□□□ -0.57
CHMP3-204ENST00000409727 ZSCAN1Q8NBB4 408 aa11.52□□□□□ -0.57
CHMP3-204ENST00000409727 MORN4Q8NDC4 146 aa11.52□□□□□ -0.57
CHMP3-204ENST00000409727 C7orf57Q8NEG2 295 aa11.52□□□□□ -0.57
CHMP3-204ENST00000409727 THAP3Q8WTV1 239 aaPredicted RBP11.52□□□□□ -0.57
CHMP3-204ENST00000409727 ARSGQ96EG1 525 aa11.52□□□□□ -0.57
CHMP3-204ENST00000409727 BTBD9Q96Q07 612 aa11.52□□□□□ -0.57
CHMP3-204ENST00000409727 WDR54Q9H977 334 aa11.52□□□□□ -0.57
CHMP3-204ENST00000409727 CFL2Q9Y281 166 aa11.52□□□□□ -0.57
CHMP3-204ENST00000409727 IFT52Q9Y366 437 aa11.52□□□□□ -0.57
CHMP3-204ENST00000409727 LYVE1Q9Y5Y7 322 aa11.52□□□□□ -0.57
CHMP3-204ENST00000409727 AP4B1Q9Y6B7 739 aa11.52□□□□□ -0.57
CHMP3-204ENST00000409727 NINQ8N4C6 2090 aa11.52□□□□□ -0.57
CHMP3-204ENST00000409727 SAGE2PA6NJ88 616 aa11.51□□□□□ -0.57
CHMP3-204ENST00000409727 GADD45GO95257 159 aa11.51□□□□□ -0.57
CHMP3-204ENST00000409727 SNAP29O95721 258 aa11.51□□□□□ -0.57
CHMP3-204ENST00000409727 DBIP07108 87 aaKnown RBP11.51□□□□□ -0.57
CHMP3-204ENST00000409727 CCNYL3P0C7X3 344 aa11.51□□□□□ -0.57
CHMP3-204ENST00000409727 FPR1P21462 350 aa11.51□□□□□ -0.57
CHMP3-204ENST00000409727 PPICP45877 212 aa11.51□□□□□ -0.57
CHMP3-204ENST00000409727 ALDH3A2P51648 485 aa11.51□□□□□ -0.57
CHMP3-204ENST00000409727 NR0B1P51843 470 aaKnown RBP11.51□□□□□ -0.57
CHMP3-204ENST00000409727 TARDBPQ13148 414 aaKnown RBP eCLIP11.51□□□□□ -0.57
CHMP3-204ENST00000409727 DAG1Q14118 895 aa11.51□□□□□ -0.57
CHMP3-204ENST00000409727 EBPQ15125 230 aaKnown RBP11.51□□□□□ -0.57
CHMP3-204ENST00000409727 NPTX1Q15818 432 aa11.51□□□□□ -0.57
CHMP3-204ENST00000409727 EXOC3L2Q2M3D2 409 aa11.51□□□□□ -0.57
CHMP3-204ENST00000409727 LIN52Q52LA3 116 aa11.51□□□□□ -0.57
CHMP3-204ENST00000409727 MRPL2Q5T653 305 aaKnown RBP11.51□□□□□ -0.57
CHMP3-204ENST00000409727 C6orf15Q6UXA7 325 aaPredicted RBP11.51□□□□□ -0.57
CHMP3-204ENST00000409727 TIPARPQ7Z3E1 657 aaKnown RBP11.51□□□□□ -0.57
CHMP3-204ENST00000409727 GALNT5Q7Z7M9 940 aa11.51□□□□□ -0.57
CHMP3-204ENST00000409727 CYP4Z1Q86W10 505 aa11.51□□□□□ -0.57
CHMP3-204ENST00000409727 LSRQ86X29 649 aaPredicted RBP11.51□□□□□ -0.57
CHMP3-204ENST00000409727 HIPK1Q86Z02 1210 aa11.51□□□□□ -0.57
CHMP3-204ENST00000409727 B3GNT7Q8NFL0 401 aa11.51□□□□□ -0.57
CHMP3-204ENST00000409727 ADIPOR1Q96A54 375 aa11.51□□□□□ -0.57
CHMP3-204ENST00000409727 LCORQ96JN0 433 aaPredicted RBP11.51□□□□□ -0.57
CHMP3-204ENST00000409727 CNBD2Q96M20 576 aa11.51□□□□□ -0.57
CHMP3-204ENST00000409727 EPYCQ99645 322 aa11.51□□□□□ -0.57
CHMP3-204ENST00000409727 LPAR4Q99677 370 aa11.51□□□□□ -0.57
CHMP3-204ENST00000409727 G6PC3Q9BUM1 346 aa11.51□□□□□ -0.57
CHMP3-204ENST00000409727 DDA1Q9BW61 102 aa11.51□□□□□ -0.57
CHMP3-204ENST00000409727 WWTR1Q9GZV5 400 aa11.51□□□□□ -0.57
CHMP3-204ENST00000409727 SAP130Q9H0E3 1048 aa11.51□□□□□ -0.57
CHMP3-204ENST00000409727 KLHL28Q9NXS3 571 aa11.51□□□□□ -0.57
CHMP3-204ENST00000409727 SMPD3Q9NY59 655 aaPredicted RBP11.51□□□□□ -0.57
CHMP3-204ENST00000409727 NXT1Q9UKK6 140 aaKnown RBP11.51□□□□□ -0.57
CHMP3-204ENST00000409727 PADI1Q9ULC6 663 aa11.51□□□□□ -0.57
CHMP3-204ENST00000409727 NTNG1Q9Y2I2 539 aa11.51□□□□□ -0.57
CHMP3-204ENST00000409727 PCNX2A6NKB5 2137 aa11.51□□□□□ -0.57
CHMP3-204ENST00000409727 DLGAP1O14490 977 aa11.51□□□□□ -0.57
CHMP3-204ENST00000409727 FOXD2O60548 495 aaPredicted RBP11.51□□□□□ -0.57
CHMP3-204ENST00000409727 BCAS1O75363 584 aaPredicted RBP11.51□□□□□ -0.57
CHMP3-204ENST00000409727 KLF7O75840 302 aaPredicted RBP11.51□□□□□ -0.57
CHMP3-204ENST00000409727 SOX30O94993 753 aa11.51□□□□□ -0.57
CHMP3-204ENST00000409727 ALPLP05186 524 aa11.51□□□□□ -0.57
CHMP3-204ENST00000409727 UMODP07911 640 aa11.51□□□□□ -0.57
CHMP3-204ENST00000409727 GKN3PP0CG01 181 aa11.51□□□□□ -0.57
CHMP3-204ENST00000409727 TCN2P20062 427 aa11.51□□□□□ -0.57
CHMP3-204ENST00000409727 HSPA13P48723 471 aa11.51□□□□□ -0.57
CHMP3-204ENST00000409727 RGS8P57771 180 aaPredicted RBP11.51□□□□□ -0.57
CHMP3-204ENST00000409727 RPS18P62269 152 aaKnown RBP11.51□□□□□ -0.57
CHMP3-204ENST00000409727 EEF1A1P68104 462 aaKnown RBP11.51□□□□□ -0.57
CHMP3-204ENST00000409727 DECR1Q16698 335 aa11.51□□□□□ -0.57
CHMP3-204ENST00000409727 FGD3Q5JSP0 725 aa11.51□□□□□ -0.57
CHMP3-204ENST00000409727 TMEM164Q5U3C3 297 aa11.51□□□□□ -0.57
CHMP3-204ENST00000409727 DHRS4L2Q6PKH6 230 aa11.51□□□□□ -0.57
CHMP3-204ENST00000409727 ISLR2Q6UXK2 745 aa11.51□□□□□ -0.57
CHMP3-204ENST00000409727 ZNF517Q6ZMY9 492 aaPredicted RBP11.51□□□□□ -0.57
CHMP3-204ENST00000409727 C16orf47Q6ZP98 133 aaPredicted RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms