RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 BPIP17213 487 aa7.96□□□□□ -1.14
SCN9A-203ENST00000409672 DLSTP36957 453 aa7.96□□□□□ -1.14
SCN9A-203ENST00000409672 CSNK1A1P48729 337 aa7.96□□□□□ -1.14
SCN9A-203ENST00000409672 SPINT3P49223 89 aa7.96□□□□□ -1.14
SCN9A-203ENST00000409672 CAV2P51636 162 aa7.96□□□□□ -1.14
SCN9A-203ENST00000409672 CLLU1OSQ5K130 101 aa7.96□□□□□ -1.14
SCN9A-203ENST00000409672 CCNJQ5T5M9 372 aa7.96□□□□□ -1.14
SCN9A-203ENST00000409672 ZC3HC1Q86WB0 502 aaKnown RBP7.96□□□□□ -1.14
SCN9A-203ENST00000409672 HDAC2Q92769 488 aaKnown RBP7.96□□□□□ -1.14
SCN9A-203ENST00000409672 LRFN5Q96NI6 719 aa7.96□□□□□ -1.14
SCN9A-203ENST00000409672 RNF38Q9H0F5 515 aa7.96□□□□□ -1.14
SCN9A-203ENST00000409672 LRRN3Q9H3W5 708 aa7.96□□□□□ -1.14
SCN9A-203ENST00000409672 RBBP9O75884 186 aa7.96□□□□□ -1.14
SCN9A-203ENST00000409672 UNGP13051 313 aaPredicted RBP7.96□□□□□ -1.14
SCN9A-203ENST00000409672 HABP2Q14520 560 aaPredicted RBP7.96□□□□□ -1.14
SCN9A-203ENST00000409672 TMEM44Q2T9K0 475 aa7.96□□□□□ -1.14
SCN9A-203ENST00000409672 NIPAL1Q6NVV3 410 aa7.96□□□□□ -1.14
SCN9A-203ENST00000409672 TMEM64Q6YI46 380 aa7.96□□□□□ -1.14
SCN9A-203ENST00000409672 ZNF551Q7Z340 670 aaPredicted RBP7.96□□□□□ -1.14
SCN9A-203ENST00000409672 CCDC71Q8IV32 467 aaPredicted RBP7.96□□□□□ -1.14
SCN9A-203ENST00000409672 ZNF675Q8TD23 568 aa7.96□□□□□ -1.14
SCN9A-203ENST00000409672 TEPSINQ96N21 525 aa7.96□□□□□ -1.14
SCN9A-203ENST00000409672 CPNE7Q9UBL6 633 aa7.96□□□□□ -1.14
SCN9A-203ENST00000409672 NOSIPQ9Y314 301 aaKnown RBP7.96□□□□□ -1.14
SCN9A-203ENST00000409672 CEBPZOSA8MTT3 80 aa7.96□□□□□ -1.14
SCN9A-203ENST00000409672 IMPA2O14732 288 aa7.96□□□□□ -1.14
SCN9A-203ENST00000409672 DLX3O60479 287 aa7.96□□□□□ -1.14
SCN9A-203ENST00000409672 SERPINA5P05154 406 aa7.96□□□□□ -1.14
SCN9A-203ENST00000409672 DDCP20711 480 aa7.96□□□□□ -1.14
SCN9A-203ENST00000409672 LRRC26Q2I0M4 334 aa7.96□□□□□ -1.14
SCN9A-203ENST00000409672 OVCH1Q7RTY7 1134 aa7.96□□□□□ -1.14
SCN9A-203ENST00000409672 SLC22A16Q86VW1 577 aa7.96□□□□□ -1.14
SCN9A-203ENST00000409672 MAFAQ8NHW3 353 aaPredicted RBP7.96□□□□□ -1.14
SCN9A-203ENST00000409672 ZMYND19Q96E35 227 aaPredicted RBP7.96□□□□□ -1.14
SCN9A-203ENST00000409672 DERL2Q9GZP9 239 aa7.96□□□□□ -1.14
SCN9A-203ENST00000409672 TAAR2Q9P1P5 351 aa7.96□□□□□ -1.14
SCN9A-203ENST00000409672 TDRD6O60522 2096 aaKnown RBP7.96□□□□□ -1.14
SCN9A-203ENST00000409672 DVL1O14640 695 aa7.96□□□□□ -1.14
SCN9A-203ENST00000409672 BET1O15155 118 aa7.96□□□□□ -1.14
SCN9A-203ENST00000409672 ALDOAP04075 364 aaKnown RBP7.96□□□□□ -1.14
SCN9A-203ENST00000409672 PBX2P40425 430 aa7.96□□□□□ -1.14
SCN9A-203ENST00000409672 HK3P52790 923 aa7.96□□□□□ -1.14
SCN9A-203ENST00000409672 DVL1P1P54792 670 aaPredicted RBP7.96□□□□□ -1.14
SCN9A-203ENST00000409672 ARSFP54793 590 aa7.96□□□□□ -1.14
SCN9A-203ENST00000409672 DPY19L1Q2PZI1 675 aa7.96□□□□□ -1.14
SCN9A-203ENST00000409672 PLA1AQ53H76 456 aa7.96□□□□□ -1.14
SCN9A-203ENST00000409672 OR4K3Q96R72 315 aa7.96□□□□□ -1.14
SCN9A-203ENST00000409672 AGXT2Q9BYV1 514 aa7.96□□□□□ -1.14
SCN9A-203ENST00000409672 SLC45A1Q9Y2W3 748 aa7.96□□□□□ -1.14
SCN9A-203ENST00000409672 MRPL33O75394 65 aaKnown RBP7.95□□□□□ -1.14
SCN9A-203ENST00000409672 ARL6IP5O75915 188 aa7.95□□□□□ -1.14
SCN9A-203ENST00000409672 CALCBP10092 127 aa7.95□□□□□ -1.14
SCN9A-203ENST00000409672 CLCN2P51788 898 aa7.95□□□□□ -1.14
SCN9A-203ENST00000409672 SOX4Q06945 474 aaPredicted RBP7.95□□□□□ -1.14
SCN9A-203ENST00000409672 TAMM41Q96BW9 452 aa7.95□□□□□ -1.14
SCN9A-203ENST00000409672 C7orf50Q9BRJ6 194 aaKnown RBP7.95□□□□□ -1.14
SCN9A-203ENST00000409672 ITPAQ9BY32 194 aa7.95□□□□□ -1.14
SCN9A-203ENST00000409672 ACKR4Q9NPB9 350 aa7.95□□□□□ -1.14
SCN9A-203ENST00000409672 TMEM100Q9NV29 134 aa7.95□□□□□ -1.14
SCN9A-203ENST00000409672 TAS2R3Q9NYW6 316 aa7.95□□□□□ -1.14
SCN9A-203ENST00000409672 SPAG17Q6Q759 2223 aa7.95□□□□□ -1.14
SCN9A-203ENST00000409672 ANKRD33BA6NCL7 494 aa7.95□□□□□ -1.14
SCN9A-203ENST00000409672 AGAP5A6NIR3 686 aa7.95□□□□□ -1.14
SCN9A-203ENST00000409672 SCAF4O95104 1147 aaKnown RBP7.95□□□□□ -1.14
SCN9A-203ENST00000409672 BIDP55957 195 aa7.95□□□□□ -1.14
SCN9A-203ENST00000409672 COL28A1Q2UY09 1125 aa7.95□□□□□ -1.14
SCN9A-203ENST00000409672 LIPJQ5W064 366 aa7.95□□□□□ -1.14
SCN9A-203ENST00000409672 TANGO2Q6ICL3 276 aa7.95□□□□□ -1.14
SCN9A-203ENST00000409672 SLC46A3Q7Z3Q1 461 aa7.95□□□□□ -1.14
SCN9A-203ENST00000409672 GOLM1Q8NBJ4 401 aa7.95□□□□□ -1.14
SCN9A-203ENST00000409672 LRIG1Q96JA1 1093 aa7.95□□□□□ -1.14
SCN9A-203ENST00000409672 SMIM3Q9BZL3 60 aa7.95□□□□□ -1.14
SCN9A-203ENST00000409672 CDCP1Q9H5V8 836 aa7.95□□□□□ -1.14
SCN9A-203ENST00000409672 TIMMDC1Q9NPL8 285 aa7.95□□□□□ -1.14
SCN9A-203ENST00000409672 CNOT11Q9UKZ1 510 aaKnown RBP7.95□□□□□ -1.14
SCN9A-203ENST00000409672 PRSS51A0A1B0GVH4 220 aa7.95□□□□□ -1.14
SCN9A-203ENST00000409672 C1orf226A1L170 272 aa7.95□□□□□ -1.14
SCN9A-203ENST00000409672 LCN1P31025 176 aa7.95□□□□□ -1.14
SCN9A-203ENST00000409672 ZNF81P51508 661 aa7.95□□□□□ -1.14
SCN9A-203ENST00000409672 ZNF678Q5SXM1 525 aa7.95□□□□□ -1.14
SCN9A-203ENST00000409672 MAMDC2Q7Z304 686 aaPredicted RBP7.95□□□□□ -1.14
SCN9A-203ENST00000409672 PPP1R35Q8TAP8 253 aa7.95□□□□□ -1.14
SCN9A-203ENST00000409672 SLC41A3Q96GZ6 507 aa7.95□□□□□ -1.14
SCN9A-203ENST00000409672 SAMD8Q96LT4 415 aa7.95□□□□□ -1.14
SCN9A-203ENST00000409672 FCRL3Q96P31 734 aaPredicted RBP7.95□□□□□ -1.14
SCN9A-203ENST00000409672 OR5B12Q96R08 314 aa7.95□□□□□ -1.14
SCN9A-203ENST00000409672 NOCTQ9UK39 431 aaKnown RBP7.95□□□□□ -1.14
SCN9A-203ENST00000409672 TMED5Q9Y3A6 229 aa7.95□□□□□ -1.14
SCN9A-203ENST00000409672 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.95□□□□□ -1.14
SCN9A-203ENST00000409672 HIDE1A8MVS5 230 aa7.95□□□□□ -1.14
SCN9A-203ENST00000409672 KLK10O43240 276 aa7.95□□□□□ -1.14
SCN9A-203ENST00000409672 YIF1AO95070 293 aa7.95□□□□□ -1.14
SCN9A-203ENST00000409672 HOXA1P49639 335 aaPredicted RBP7.95□□□□□ -1.14
SCN9A-203ENST00000409672 STC1P52823 247 aa7.95□□□□□ -1.14
SCN9A-203ENST00000409672 INCA1Q0VD86 236 aa7.95□□□□□ -1.14
SCN9A-203ENST00000409672 DAG1Q14118 895 aa7.95□□□□□ -1.14
SCN9A-203ENST00000409672 RBMS3Q6XE24 437 aaKnown RBP7.95□□□□□ -1.14
SCN9A-203ENST00000409672 MISPQ8IVT2 679 aa7.95□□□□□ -1.14
SCN9A-203ENST00000409672 NAT8LQ8N9F0 302 aa7.95□□□□□ -1.14
SCN9A-203ENST00000409672 ZNF784Q8NCA9 323 aaPredicted RBP7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms