RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 SEMA7AO75326 666 aa12.56□□□□□ -0.4
COL6A2-204ENST00000409416 CELA2BP08218 269 aaPredicted RBP12.56□□□□□ -0.4
COL6A2-204ENST00000409416 SRPRAP08240 638 aaKnown RBP12.56□□□□□ -0.4
COL6A2-204ENST00000409416 OPRD1P41143 372 aa12.56□□□□□ -0.4
COL6A2-204ENST00000409416 HCCSP53701 268 aa12.56□□□□□ -0.4
COL6A2-204ENST00000409416 PRMT2P55345 433 aa12.56□□□□□ -0.4
COL6A2-204ENST00000409416 EEF1A2Q05639 463 aaKnown RBP12.56□□□□□ -0.4
COL6A2-204ENST00000409416 IL18Q14116 193 aa12.56□□□□□ -0.4
COL6A2-204ENST00000409416 TRMT12Q53H54 448 aaKnown RBP12.56□□□□□ -0.4
COL6A2-204ENST00000409416 TRIQKQ629K1 86 aa12.56□□□□□ -0.4
COL6A2-204ENST00000409416 PAMR1Q6UXH9 720 aa12.56□□□□□ -0.4
COL6A2-204ENST00000409416 NKAIN4Q8IVV8 208 aa12.56□□□□□ -0.4
COL6A2-204ENST00000409416 OR4N4Q8N0Y3 316 aa12.56□□□□□ -0.4
COL6A2-204ENST00000409416 UXS1Q8NBZ7 420 aa12.56□□□□□ -0.4
COL6A2-204ENST00000409416 OR5P2Q8WZ92 322 aa12.56□□□□□ -0.4
COL6A2-204ENST00000409416 FYTTD1Q96QD9 318 aaKnown RBP12.56□□□□□ -0.4
COL6A2-204ENST00000409416 OR2A14Q96R47 310 aa12.56□□□□□ -0.4
COL6A2-204ENST00000409416 SDHCQ99643 169 aaPredicted RBP12.56□□□□□ -0.4
COL6A2-204ENST00000409416 RANGRFQ9HD47 186 aaPredicted RBP12.56□□□□□ -0.4
COL6A2-204ENST00000409416 C12orf4Q9NQ89 552 aa12.56□□□□□ -0.4
COL6A2-204ENST00000409416 NCKAP1Q9Y2A7 1128 aa12.56□□□□□ -0.4
COL6A2-204ENST00000409416 GPR55Q9Y2T6 319 aaPredicted RBP12.56□□□□□ -0.4
COL6A2-204ENST00000409416 WDR45Q9Y484 360 aa12.56□□□□□ -0.4
COL6A2-204ENST00000409416 POLEQ07864 2286 aa12.56□□□□□ -0.4
COL6A2-204ENST00000409416 CISD3P0C7P0 127 aa12.55□□□□□ -0.4
COL6A2-204ENST00000409416 LAMP2P13473 410 aa12.55□□□□□ -0.4
COL6A2-204ENST00000409416 MMP11P24347 488 aa12.55□□□□□ -0.4
COL6A2-204ENST00000409416 CMPK1P30085 196 aa12.55□□□□□ -0.4
COL6A2-204ENST00000409416 SOX18P35713 384 aa12.55□□□□□ -0.4
COL6A2-204ENST00000409416 RAB28P51157 221 aa12.55□□□□□ -0.4
COL6A2-204ENST00000409416 ITPRIPL2Q3MIP1 535 aa12.55□□□□□ -0.4
COL6A2-204ENST00000409416 PHC2Q8IXK0 858 aa12.55□□□□□ -0.4
COL6A2-204ENST00000409416 ZNF433Q8N7K0 673 aaPredicted RBP12.55□□□□□ -0.4
COL6A2-204ENST00000409416 OR8K3Q8NH51 312 aa12.55□□□□□ -0.4
COL6A2-204ENST00000409416 RERGQ96A58 199 aaPredicted RBP12.55□□□□□ -0.4
COL6A2-204ENST00000409416 RNFT2Q96EX2 444 aa12.55□□□□□ -0.4
COL6A2-204ENST00000409416 PTCHD1Q96NR3 888 aa12.55□□□□□ -0.4
COL6A2-204ENST00000409416 IFT27Q9BW83 186 aa12.55□□□□□ -0.4
COL6A2-204ENST00000409416 ATP13A2Q9NQ11 1180 aa12.55□□□□□ -0.4
COL6A2-204ENST00000409416 FBXO34Q9NWN3 711 aa12.55□□□□□ -0.4
COL6A2-204ENST00000409416 YBX2Q9Y2T7 364 aaKnown RBP12.55□□□□□ -0.4
COL6A2-204ENST00000409416 SERTM1A2A2V5 107 aa12.55□□□□□ -0.4
COL6A2-204ENST00000409416 MEIOCA2RUB1 952 aa12.55□□□□□ -0.4
COL6A2-204ENST00000409416 EFCAB14O75071 495 aa12.55□□□□□ -0.4
COL6A2-204ENST00000409416 SLC35G6P0C7Q6 338 aa12.55□□□□□ -0.4
COL6A2-204ENST00000409416 HPGDP15428 266 aa12.55□□□□□ -0.4
COL6A2-204ENST00000409416 DRD3P35462 400 aa12.55□□□□□ -0.4
COL6A2-204ENST00000409416 PCBP3P57721 371 aaKnown RBP12.55□□□□□ -0.4
COL6A2-204ENST00000409416 IFITM2Q01629 132 aa12.55□□□□□ -0.4
COL6A2-204ENST00000409416 NDUFA5Q16718 116 aa12.55□□□□□ -0.4
COL6A2-204ENST00000409416 PRAMEF17Q5VTA0 474 aa12.55□□□□□ -0.4
COL6A2-204ENST00000409416 ABI3BPQ7Z7G0 1075 aa12.55□□□□□ -0.4
COL6A2-204ENST00000409416 AMIGO1Q86WK6 493 aa12.55□□□□□ -0.4
COL6A2-204ENST00000409416 OOSP2Q86WS3 158 aa12.55□□□□□ -0.4
COL6A2-204ENST00000409416 LAS2Q8IYD9 372 aa12.55□□□□□ -0.4
COL6A2-204ENST00000409416 OR6K6Q8NGW6 343 aa12.55□□□□□ -0.4
COL6A2-204ENST00000409416 COQ10AQ96MF6 247 aa12.55□□□□□ -0.4
COL6A2-204ENST00000409416 QRFPRQ96P65 431 aa12.55□□□□□ -0.4
COL6A2-204ENST00000409416 SGPP1Q9BX95 441 aa12.55□□□□□ -0.4
COL6A2-204ENST00000409416 TXNL4BQ9NX01 149 aaKnown RBP12.55□□□□□ -0.4
COL6A2-204ENST00000409416 SAGE1Q9NXZ1 904 aa12.55□□□□□ -0.4
COL6A2-204ENST00000409416 MRPL15Q9P015 296 aaKnown RBP12.55□□□□□ -0.4
COL6A2-204ENST00000409416 TNFRSF10AO00220 468 aa12.55□□□□□ -0.4
COL6A2-204ENST00000409416 RECKO95980 971 aa12.55□□□□□ -0.4
COL6A2-204ENST00000409416 ALPPP05187 535 aa12.55□□□□□ -0.4
COL6A2-204ENST00000409416 LARS2Q15031 903 aaKnown RBP12.55□□□□□ -0.4
COL6A2-204ENST00000409416 MLF2Q15773 248 aaPredicted RBP12.55□□□□□ -0.4
COL6A2-204ENST00000409416 ANKRD54Q6NXT1 300 aa12.55□□□□□ -0.4
COL6A2-204ENST00000409416 COMTD1Q86VU5 262 aa12.55□□□□□ -0.4
COL6A2-204ENST00000409416 LINC00471Q8N535 108 aa12.55□□□□□ -0.4
COL6A2-204ENST00000409416 GOT1L1Q8NHS2 421 aaPredicted RBP12.55□□□□□ -0.4
COL6A2-204ENST00000409416 OR1E3Q8WZA6 343 aa12.55□□□□□ -0.4
COL6A2-204ENST00000409416 METTL2AQ96IZ6 378 aaKnown RBP12.55□□□□□ -0.4
COL6A2-204ENST00000409416 ZNF514Q96K75 400 aaPredicted RBP12.55□□□□□ -0.4
COL6A2-204ENST00000409416 ZNF354BQ96LW1 612 aa12.55□□□□□ -0.4
COL6A2-204ENST00000409416 OR52A5Q9H2C5 316 aa12.55□□□□□ -0.4
COL6A2-204ENST00000409416 HCN2Q9UL51 889 aa12.55□□□□□ -0.4
COL6A2-204ENST00000409416 SLC27A6Q9Y2P4 619 aa12.55□□□□□ -0.4
COL6A2-204ENST00000409416 TRAV27A0A087WT01 109 aa12.54□□□□□ -0.4
COL6A2-204ENST00000409416 SPINT1O43278 529 aa12.54□□□□□ -0.4
COL6A2-204ENST00000409416 KLHL18O94889 574 aa12.54□□□□□ -0.4
COL6A2-204ENST00000409416 RPP14O95059 124 aaKnown RBP12.54□□□□□ -0.4
COL6A2-204ENST00000409416 RAB36O95755 333 aa12.54□□□□□ -0.4
COL6A2-204ENST00000409416 EGFP01133 1207 aa12.54□□□□□ -0.4
COL6A2-204ENST00000409416 OPN1LWP04000 364 aa12.54□□□□□ -0.4
COL6A2-204ENST00000409416 APEX1P27695 318 aaKnown RBP12.54□□□□□ -0.4
COL6A2-204ENST00000409416 GABRA3P34903 492 aa12.54□□□□□ -0.4
COL6A2-204ENST00000409416 CD79BP40259 229 aa12.54□□□□□ -0.4
COL6A2-204ENST00000409416 HTR3AP46098 478 aa12.54□□□□□ -0.4
COL6A2-204ENST00000409416 PLBD1Q6P4A8 553 aa12.54□□□□□ -0.4
COL6A2-204ENST00000409416 KLBQ86Z14 1044 aa12.54□□□□□ -0.4
COL6A2-204ENST00000409416 BBS1Q8NFJ9 593 aa12.54□□□□□ -0.4
COL6A2-204ENST00000409416 OR52I1Q8NGK6 324 aa12.54□□□□□ -0.4
COL6A2-204ENST00000409416 WFIKKN2Q8TEU8 576 aa12.54□□□□□ -0.4
COL6A2-204ENST00000409416 EFHD2Q96C19 240 aaPredicted RBP12.54□□□□□ -0.4
COL6A2-204ENST00000409416 PEX11GQ96HA9 241 aa12.54□□□□□ -0.4
COL6A2-204ENST00000409416 SAMD8Q96LT4 415 aa12.54□□□□□ -0.4
COL6A2-204ENST00000409416 KCTD7Q96MP8 289 aa12.54□□□□□ -0.4
COL6A2-204ENST00000409416 ZFP3Q96NJ6 502 aa12.54□□□□□ -0.4
COL6A2-204ENST00000409416 C19orf43Q9BQ61 176 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms