RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 SFXN5Q8TD22 340 aa16.35■□□□□ 0.21
PDLIM2-206ENST00000409141 ACTRT2Q8TDY3 377 aa16.35■□□□□ 0.21
PDLIM2-206ENST00000409141 ADAMTS15Q8TE58 950 aa16.35■□□□□ 0.21
PDLIM2-206ENST00000409141 PHF10Q8WUB8 498 aaKnown RBP16.35■□□□□ 0.21
PDLIM2-206ENST00000409141 MAELQ96JY0 434 aaKnown RBP16.35■□□□□ 0.21
PDLIM2-206ENST00000409141 ACTRT3Q9BYD9 372 aa16.35■□□□□ 0.21
PDLIM2-206ENST00000409141 ACBD3Q9H3P7 528 aa16.35■□□□□ 0.21
PDLIM2-206ENST00000409141 PIGUQ9H490 435 aa16.35■□□□□ 0.21
PDLIM2-206ENST00000409141 SLCO1B3Q9NPD5 702 aa16.35■□□□□ 0.21
PDLIM2-206ENST00000409141 SDHAF3Q9NRP4 125 aa16.35■□□□□ 0.21
PDLIM2-206ENST00000409141 FAM120CQ9NX05 1096 aaKnown RBP16.35■□□□□ 0.21
PDLIM2-206ENST00000409141 FLRT3Q9NZU0 649 aa16.35■□□□□ 0.21
PDLIM2-206ENST00000409141 ABCG2Q9UNQ0 655 aa16.35■□□□□ 0.21
PDLIM2-206ENST00000409141 SLC6A5Q9Y345 797 aa16.35■□□□□ 0.21
PDLIM2-206ENST00000409141 NCKAP5O14513 1909 aa16.35■□□□□ 0.21
PDLIM2-206ENST00000409141 NUP214P35658 2090 aaPredicted RBP16.35■□□□□ 0.21
PDLIM2-206ENST00000409141 FIGNL2A6NMB9 653 aa16.35■□□□□ 0.21
PDLIM2-206ENST00000409141 E9PBE3 544 aa16.35■□□□□ 0.21
PDLIM2-206ENST00000409141 ZNF195O14628 629 aa16.35■□□□□ 0.21
PDLIM2-206ENST00000409141 DIAPH2O60879 1101 aa16.35■□□□□ 0.21
PDLIM2-206ENST00000409141 KCNK2O95069 426 aa16.35■□□□□ 0.21
PDLIM2-206ENST00000409141 CPSF4O95639 269 aaKnown RBP16.35■□□□□ 0.21
PDLIM2-206ENST00000409141 S100A3P33764 101 aa16.35■□□□□ 0.21
PDLIM2-206ENST00000409141 GAS1P54826 345 aa16.35■□□□□ 0.21
PDLIM2-206ENST00000409141 PHC1P78364 1004 aa16.35■□□□□ 0.21
PDLIM2-206ENST00000409141 POU6F2P78424 691 aaPredicted RBP16.35■□□□□ 0.21
PDLIM2-206ENST00000409141 SPANXN4Q5MJ08 99 aa16.35■□□□□ 0.21
PDLIM2-206ENST00000409141 EXOSC6Q5RKV6 272 aaKnown RBP16.35■□□□□ 0.21
PDLIM2-206ENST00000409141 CDC73Q6P1J9 531 aa16.35■□□□□ 0.21
PDLIM2-206ENST00000409141 XKRXQ6PP77 449 aa16.35■□□□□ 0.21
PDLIM2-206ENST00000409141 YRDCQ86U90 279 aaKnown RBP16.35■□□□□ 0.21
PDLIM2-206ENST00000409141 MARCH3Q86UD3 253 aa16.35■□□□□ 0.21
PDLIM2-206ENST00000409141 ANKRD46Q86W74 232 aa16.35■□□□□ 0.21
PDLIM2-206ENST00000409141 FAM83FQ8NEG4 500 aaPredicted RBP16.35■□□□□ 0.21
PDLIM2-206ENST00000409141 OR14L1PQ8NHC6 308 aa16.35■□□□□ 0.21
PDLIM2-206ENST00000409141 FAM110BQ8TC76 370 aa16.35■□□□□ 0.21
PDLIM2-206ENST00000409141 DTNBP1Q96EV8 351 aa16.35■□□□□ 0.21
PDLIM2-206ENST00000409141 TEX37Q96LM6 180 aa16.35■□□□□ 0.21
PDLIM2-206ENST00000409141 STACQ99469 402 aa16.35■□□□□ 0.21
PDLIM2-206ENST00000409141 DUSP22Q9NRW4 184 aa16.35■□□□□ 0.21
PDLIM2-206ENST00000409141 GPATCH2Q9NW75 528 aa16.35■□□□□ 0.21
PDLIM2-206ENST00000409141 GIN1Q9NXP7 522 aa16.35■□□□□ 0.21
PDLIM2-206ENST00000409141 PPP4R1LQ9P1A2 415 aa16.35■□□□□ 0.21
PDLIM2-206ENST00000409141 FBXL2Q9UKC9 423 aa16.35■□□□□ 0.21
PDLIM2-206ENST00000409141 GPR45Q9Y5Y3 372 aa16.35■□□□□ 0.21
PDLIM2-206ENST00000409141 USH1CQ9Y6N9 552 aa16.35■□□□□ 0.21
PDLIM2-206ENST00000409141 SCN2BO60939 215 aa16.34■□□□□ 0.21
PDLIM2-206ENST00000409141 KRT16P08779 473 aa16.34■□□□□ 0.21
PDLIM2-206ENST00000409141 IDO1P14902 403 aa16.34■□□□□ 0.21
PDLIM2-206ENST00000409141 ACVR2AP27037 513 aa16.34■□□□□ 0.21
PDLIM2-206ENST00000409141 GRAMD1BQ3KR37 738 aa16.34■□□□□ 0.21
PDLIM2-206ENST00000409141 FAM174BQ3ZCQ3 159 aa16.34■□□□□ 0.21
PDLIM2-206ENST00000409141 HIST2H2BCQ6DN03 193 aa16.34■□□□□ 0.21
PDLIM2-206ENST00000409141 EPGNQ6UW88 154 aa16.34■□□□□ 0.21
PDLIM2-206ENST00000409141 OR4K17Q8NGC6 315 aa16.34■□□□□ 0.21
PDLIM2-206ENST00000409141 CDS1Q92903 461 aa16.34■□□□□ 0.21
PDLIM2-206ENST00000409141 OR52B2Q96RD2 323 aa16.34■□□□□ 0.21
PDLIM2-206ENST00000409141 ZBTB18Q99592 522 aa16.34■□□□□ 0.21
PDLIM2-206ENST00000409141 TIMP4Q99727 224 aa16.34■□□□□ 0.21
PDLIM2-206ENST00000409141 G6PC3Q9BUM1 346 aa16.34■□□□□ 0.21
PDLIM2-206ENST00000409141 BTBD2Q9BX70 525 aa16.34■□□□□ 0.21
PDLIM2-206ENST00000409141 TBL1XR1Q9BZK7 514 aa16.34■□□□□ 0.21
PDLIM2-206ENST00000409141 PCDHGB3Q9Y5G1 929 aa16.34■□□□□ 0.21
PDLIM2-206ENST00000409141 FREM3P0C091 2139 aa16.33■□□□□ 0.21
PDLIM2-206ENST00000409141 C17orf51A8MQB3 221 aa16.33■□□□□ 0.2
PDLIM2-206ENST00000409141 UBDO15205 165 aa16.33■□□□□ 0.2
PDLIM2-206ENST00000409141 WDR1O75083 606 aa16.33■□□□□ 0.2
PDLIM2-206ENST00000409141 SOX30O94993 753 aa16.33■□□□□ 0.2
PDLIM2-206ENST00000409141 GCKP35557 465 aa16.33■□□□□ 0.2
PDLIM2-206ENST00000409141 PMPCAQ10713 525 aa16.33■□□□□ 0.2
PDLIM2-206ENST00000409141 STX5Q13190 355 aa16.33■□□□□ 0.2
PDLIM2-206ENST00000409141 CCNJQ5T5M9 372 aa16.33■□□□□ 0.2
PDLIM2-206ENST00000409141 C6orf120Q7Z4R8 191 aa16.33■□□□□ 0.2
PDLIM2-206ENST00000409141 CLEC4FQ8N1N0 589 aa16.33■□□□□ 0.2
PDLIM2-206ENST00000409141 RPRMLQ8N4K4 120 aa16.33■□□□□ 0.2
PDLIM2-206ENST00000409141 MARVELD2Q8N4S9 558 aa16.33■□□□□ 0.2
PDLIM2-206ENST00000409141 DUSP19Q8WTR2 217 aa16.33■□□□□ 0.2
PDLIM2-206ENST00000409141 MARK4Q96L34 752 aa16.33■□□□□ 0.2
PDLIM2-206ENST00000409141 RTN4RQ9BZR6 473 aa16.33■□□□□ 0.2
PDLIM2-206ENST00000409141 DSN1Q9H410 356 aa16.33■□□□□ 0.2
PDLIM2-206ENST00000409141 FBXO34Q9NWN3 711 aa16.33■□□□□ 0.2
PDLIM2-206ENST00000409141 TAS2R10Q9NYW0 307 aa16.33■□□□□ 0.2
PDLIM2-206ENST00000409141 RNF103-CHMP3A0A140T963 221 aa16.32■□□□□ 0.2
PDLIM2-206ENST00000409141 C9JVG2 144 aa16.32■□□□□ 0.2
PDLIM2-206ENST00000409141 SLC22A3O75751 556 aa16.32■□□□□ 0.2
PDLIM2-206ENST00000409141 TGDSO95455 350 aa16.32■□□□□ 0.2
PDLIM2-206ENST00000409141 HOXD4P09016 255 aaPredicted RBP16.32■□□□□ 0.2
PDLIM2-206ENST00000409141 GABRA1P14867 456 aa16.32■□□□□ 0.2
PDLIM2-206ENST00000409141 BMP7P18075 431 aa16.32■□□□□ 0.2
PDLIM2-206ENST00000409141 AGAP20933 346 aa16.32■□□□□ 0.2
PDLIM2-206ENST00000409141 DPP4P27487 766 aa16.32■□□□□ 0.2
PDLIM2-206ENST00000409141 COL8A1P27658 744 aa16.32■□□□□ 0.2
PDLIM2-206ENST00000409141 IL12AP29459 219 aa16.32■□□□□ 0.2
PDLIM2-206ENST00000409141 SRD5A2P31213 254 aa16.32■□□□□ 0.2
PDLIM2-206ENST00000409141 DGKQP52824 942 aa16.32■□□□□ 0.2
PDLIM2-206ENST00000409141 CRYZQ08257 329 aaKnown RBP16.32■□□□□ 0.2
PDLIM2-206ENST00000409141 ART3Q13508 389 aa16.32■□□□□ 0.2
PDLIM2-206ENST00000409141 GSTA3Q16772 222 aa16.32■□□□□ 0.2
PDLIM2-206ENST00000409141 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.32■□□□□ 0.2
PDLIM2-206ENST00000409141 VASNQ6EMK4 673 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms